# Lines preceded with a hash mark, like this line, are comments. # Comments are ignored by Jmol. # LOCAL MOLECULE pdbFileName = "MP_relenza.pdb" # STATE SCRIPTS proteopediaStateScript = "/wiki/scripts/User:Eric_Martz/Molecular_Playground/Authoring/3ckz_relenza_tyr274/9.spt" localStateScript = "MP_relenza_state.spt" # BANNER TEXT bannerMessage = "Relenza Stops Tamiflu-Resistant Influenza Mutant His274Tyr" # ELEMENT COLOR KEYS # If an element color key is desired, # list the elements to be shown in the color key # in the order you want them to appear. var elementList = array("C", "O", "N") # ARBITRARY COLOR KEYS function arbitraryColorKeys() { # Colors can be specified in various ways. Those below are specified # using Red-Green-Blue (RGB) hexadecimal values. Each color # can be between 00 and ff (255 in decimal). # See http://jmol.sourceforge.net/jscolors/ # Example: these are all the same color, but one word per line. colorKey("Influenza", "[x00c000]") colorKey("Neuraminidase", "[x00c000]") colorKey("Protein", "[x00c000]") colorKey("Backbone", "[x00c000]") } # SPIN? (RECOMMENDED VALUE: TRUE) spinDefault = true # set spinDefault to false if you don't want spinning to start automatically. # ENTRANCE ZOOM # initial and final zoom values zoomStart = 100 zoomEnd = 200 # DISPLAY SCENE (DO NOT CHANGE ANYTHING BELOW) if (_applet) // for web page in Proteopedia { script "/wiki/images/c/c3/MPSceneVersion01.spt" } else if (PlaygroundProjection) { scriptPath = @PlaygroundSupportScriptPath + "MPSceneVersion01.spt" script @scriptPath } else { script MPSceneVersion01.spt } # END OF SCRIPT