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2fx4
From Proteopedia
| 2fx4, resolution 1.65Å () | |||||||||
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| Ligands: | , | ||||||||
| Activity: | Trypsin, with EC number 3.4.21.4 | ||||||||
| Related: | 2fww, 2fx6 | ||||||||
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
Contents |
Bovine trypsin bound by 4-piperidinebutyrate to make acylenzyme complex
Improved peptide-based inhibitors of human beta tryptase were discovered using information gleaned from tripeptide library screening and structure-guided design methods, including fragment screening. Our efforts sought to improve this class of inhibitors by replacing the traditional Lys or Arg P1 element. The optimized compounds display low nanomolar potency against the mast cell target and several hundred-fold selectivity with respect to serine protease off targets. Thus, replacement of Lys/Arg at P1 in a peptide-like scaffold does not need to be accompanied by a loss in target affinity.
Structure-guided design of peptide-based tryptase inhibitors., McGrath ME, Sprengeler PA, Hirschbein B, Somoza JR, Lehoux I, Janc JW, Gjerstad E, Graupe M, Estiarte A, Venkataramani C, Liu Y, Yee R, Ho JD, Green MJ, Lee CS, Liu L, Tai V, Spencer J, Sperandio D, Katz BA, Biochemistry. 2006 May 16;45(19):5964-73. PMID:16681368
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
About this Structure
2fx4 is a 1 chain structure of Trypsin with sequence from Bos taurus. Full crystallographic information is available from OCA.
See Also
Reference
- McGrath ME, Sprengeler PA, Hirschbein B, Somoza JR, Lehoux I, Janc JW, Gjerstad E, Graupe M, Estiarte A, Venkataramani C, Liu Y, Yee R, Ho JD, Green MJ, Lee CS, Liu L, Tai V, Spencer J, Sperandio D, Katz BA. Structure-guided design of peptide-based tryptase inhibitors. Biochemistry. 2006 May 16;45(19):5964-73. PMID:16681368 doi:10.1021/bi060173m
