Histamine H1 receptor

Histamine H1 Receptor

spinqualitylabelsall models Histamine H1 receptor with an antagonist doxepin, lipid and phosphate (PDB code 3rze) Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Allergy symptoms are mostly caused by the release of histamine in response to allergens. The binding of histamine to the extracellular portion of the H1 receptor triggers a structural change of the transmembrane portion, leading to a change in the C terminal area. This c terminal region interacts with G proteins, leading to the activation of the Gq signalling pathway, which triggers allergy symptoms like itchy eyes and runny noses. Many allergy drugs are anti-histamines, in that they bind to the histamine receptor but do not cause the conformational change that leads to a response. See also Receptor. Structural highlights The structure of the H1 histamine receptor bound to an antihistamine, doxepin was published in 2011 . A N-->C rainbow view colors the N terminus blue and the C terminus red, with the intervening segments paralleling the rainbow (blue, green, yellow, orange, red). This image is oriented with the transmembrane section at the top and the cytosolic portion below. The hydrophobic residues are shown in grey, while hydrophilic amino acids are shown in purple. Doxepin was originally made as a tricyclic antidepressant, but it also is a potent antihistamine binds among the transmembrane alpha helices. Binding is stabilized by a number of interactions with amino acids. Like many G protein coupled receptors, the bottom of the binding pocket contains a conserved tryptophan residue. Interestingly, second generation antihistamines take advantage of an anion binding site formed by two lysine residues; in this structure, they interact with a phosphate. Like other G protein-coupled receptors, the Histamine H1 Receptor contains a conserved DRY (aspartate (D), arginine (R), tyrosine (Y)) motif in the seven helix transmembrane surface near the cytosolic face. In some G protein receptors, an "ionic lock" interaction between the asparate and arginine in this motif stabilizes the inactive state; however, in the Histamine H1 receptor, Arginine 125 forms a hydrogen bond with glutamine 416, which stabilizes the inactive state. A cryo-EM structure of the histamine-bound H1 receptor association with the Gq protein has been published. Histamine activates receptor via interacting with the key residues of both transmembrane domain 3 (TM3) and TM6 to squash the binding pocket on the extracellular side and to open the cavity on the intracellular side for Gq engagement. This can be seen by the farther distance between arginine 125 and Gln 416; they are now 2 angstroms (0.2 nm) farther apart. See also: G protein-coupled receptor Receptor Transmembrane (cell surface) receptors Neurotransmitters

3D structures of histamine H1 receptor

Updated on 23-March-2026

Receptor - hHHR + doxepin + lipid + phosphate - human
G protein-coupled receptors, G protein-coupled receptor, Receptor, Transmembrane (cell surface) receptors - hHHR + guanine nucleotide-binding protein + scFv + histamine - Cryo EM
Neurotransmitters, 8x5y – hHHR/B562- Cryo EM
8x63 – hHHR/B562 + mepyramine - Cryo EM
8x64 – hHHR/B562 + desloratadine - Cryo EM

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