Proteopedia - User contributions [en]

Sandbox Reserved 563

2012-05-24T18:28:54Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Linels,
Here is your very own Proteopedia Page for pdb code: 3CLN.
Your presentation is scheduled for: June 20.

Have Fun!

Greg Buhrman
[[Image:3cln.png|left|200px]]


{{STRUCTURE_3cln| PDB=3cln | SCENE= }}

===STRUCTURE OF CALMODULIN REFINED AT 2.2 ANGSTROMS RESOLUTION===


{{ABSTRACT_PUBMED_3145979}}

==About this Structure==
3CLN is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1cln 1cln]. The August 2003 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Calmodulin'' by Shuchismita Dutta and David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2003_8 10.2210/rcsb_pdb/mom_2003_8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLN OCA].

==Reference==
<ref group="xtra">PMID:3145979</ref><references group="xtra"/>
[[Category: Calmodulin]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Rattus rattus]]
[[Category: Babu, Y S.]]
[[Category: Bugg, C E.]]
[[Category: Cook, W J.]]
[[Category: Calcium binding protein]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jan 21 10:12:27 2010''

Sandbox Reserved 568

2012-05-24T18:23:27Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Priscilla,
Here is your very own Proteopedia Page for pdb code: 3DDQ.
Your presentation is scheduled for: June 18.

Have Fun!

Greg Buhrman
[[Image:3ddq.png|left|200px]]


{{STRUCTURE_3ddq| PDB=3ddq | SCENE= }}

===Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor roscovitine===


{{ABSTRACT_PUBMED_18574471}}

==About this Structure==
3DDQ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DDQ OCA].

==Reference==
<ref group="xtra">PMID:18574471</ref><references group="xtra"/>
[[Category: Bos taurus]]
[[Category: Cyclin-dependent kinase]]
[[Category: Homo sapiens]]
[[Category: Echalier, A.]]
[[Category: Endicott, J A.]]
[[Category: Atp-binding]]
[[Category: Cell cycle]]
[[Category: Cell division]]
[[Category: Cyclin]]
[[Category: Cytoplasm]]
[[Category: Kinase]]
[[Category: Mitosis]]
[[Category: Nucleotide-binding]]
[[Category: Nucleus]]
[[Category: Phosphoprotein]]
[[Category: Phosphorylation]]
[[Category: Polymorphism]]
[[Category: Ser/thr protein kinase]]
[[Category: Serine/threonine-protein kinase]]
[[Category: Transferase]]
[[Category: Transferase/cell cycle complex]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:45:18 2009''

Sandbox Reserved 567

2012-05-24T18:19:12Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Eric,
Here is your very own Proteopedia Page for pdb code: 1JFF.
Your presentation is scheduled for: June 14.

Have Fun!

Greg Buhrman
[[Image:1jff.png|left|200px]]


{{STRUCTURE_1jff| PDB=1jff | SCENE= }}

===Refined structure of alpha-beta tubulin from zinc-induced sheets stabilized with taxol===


{{ABSTRACT_PUBMED_11700061}}

==About this Structure==
[[1jff]] is a 2 chain structure of [[Tubulin]] with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JFF OCA].

==See Also==
*[[Tubulin]]

==Reference==
<ref group="xtra">PMID:11700061</ref><references group="xtra"/>
[[Category: Bos taurus]]
[[Category: Downing, K H.]]
[[Category: Li, H.]]
[[Category: Lowe, J.]]
[[Category: Nogales, E.]]
[[Category: Dimer]]
[[Category: Gtpase]]
[[Category: Structural protein]]

Sandbox Reserved 565

2012-05-24T18:15:52Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Eric,
Here is your very own Proteopedia Page for pdb code: 2NCD.
Your presentation is scheduled for: June 14.

Have Fun!

Greg Buhrman
[[Image:2ncd.png|left|200px]]


{{STRUCTURE_2ncd| PDB=2ncd | SCENE= }}

===NCD (NON-CLARET DISJUNCTIONAL) DIMER FROM D. MELANOGASTER===


{{ABSTRACT_PUBMED_9796817}}

==About this Structure==
[[2ncd]] is a 1 chain structure of [[Kinesin]] with sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. The April 2005 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Kinesin'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2005_4 10.2210/rcsb_pdb/mom_2005_4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NCD OCA].

==See Also==
*[[Kinesin]]

==Reference==
<ref group="xtra">PMID:9796817</ref><references group="xtra"/>
[[Category: Drosophila melanogaster]]
[[Category: Kinesin]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Case, R B.]]
[[Category: Dai, S C.]]
[[Category: Fletterick, R J.]]
[[Category: Hart, C L.]]
[[Category: Ruby, A.]]
[[Category: Sablin, E P.]]
[[Category: Vale, R D.]]
[[Category: Contractile protein]]
[[Category: Kinesin]]
[[Category: Microtubule-based motor]]
[[Category: Ncd]]

Sandbox Reserved 564

2012-05-24T18:12:55Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Mike,
Here is your very own Proteopedia Page for pdb code: 1M8Q.
Your presentation is scheduled for: June 15.

Have Fun!

Greg Buhrman
[[Image:1m8q.png|left|200px]]


{{STRUCTURE_1m8q| PDB=1m8q | SCENE= }}

===Molecular Models of Averaged Rigor Crossbridges from Tomograms of Insect Flight Muscle===


{{ABSTRACT_PUBMED_12160705}}

==About this Structure==
[[1m8q]] is a 26 chain structure of [[Actin]] and [[Myosin]] with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus] and [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M8Q OCA].

==See Also==
*[[Actin]]
*[[Myosin]]

==Reference==
<ref group="xtra">PMID:12160705</ref><references group="xtra"/>
[[Category: Gallus gallus]]
[[Category: Oryctolagus cuniculus]]
[[Category: Chen, L F.]]
[[Category: Reedy, M C.]]
[[Category: Reedy, M K.]]
[[Category: Taylor, K A.]]
[[Category: Winkler, H.]]
[[Category: Actin-myosin complex in situ in muscle]]
[[Category: Contractile protein]]

Sandbox Reserved 562

2012-05-24T18:08:17Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Justin,
Here is your very own Proteopedia Page for pdb code: 2WDL.
Your presentation is scheduled for: June 11.

Have Fun!

Greg Buhrman
[[Image:2wdl.png|left|200px]]


{{STRUCTURE_2wdl| PDB=2wdl | SCENE= }}

===STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH MRNA, PAROMOMYCIN, ACYLATED A- AND P-SITE TRNAS, AND E-SITE TRNA. THIS FILE CONTAINS THE 50S SUBUNIT FOR MOLECULE I.===


{{ABSTRACT_PUBMED_19363482}}

==About this Structure==
[[2wdl]] is a 31 chain structure of [[Ribosomal protein L1]], [[Ribosomal protein L2]], [[Ribosomal protein L3]], [[Ribosomal protein L4]], [[Ribosomal protein L5]], [[Ribosomal protein L6]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WDL OCA].

==See Also==
*[[Ribosomal protein L1]]
*[[Ribosomal protein L2]]
*[[Ribosomal protein L3]]
*[[Ribosomal protein L4]]
*[[Ribosomal protein L5]]
*[[Ribosomal protein L6]]
*[[Ribosome]]

==Reference==
<ref group="xtra">PMID:19363482</ref><references group="xtra"/>
[[Category: 70S Ribosomes]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Thermus thermophilus]]
[[Category: Kelley, A C.]]
[[Category: Loakes, D.]]
[[Category: Ramakrishnan, V.]]
[[Category: Voorhees, R M.]]
[[Category: Weixlbaumer, A.]]
[[Category: Metal-binding]]
[[Category: Methylation]]
[[Category: Mrna]]
[[Category: Paromomycin]]
[[Category: Repressor]]
[[Category: Ribonucleoprotein]]
[[Category: Ribosomal protein]]
[[Category: Ribosome]]
[[Category: Rna-binding]]
[[Category: Rrna-binding]]
[[Category: Translation]]
[[Category: Translation regulation]]
[[Category: Trna]]
[[Category: Trna-binding]]
[[Category: Zinc]]

Sandbox Reserved 561

2012-05-24T18:04:52Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Lakshmi,
Here is your very own Proteopedia Page for pdb code: 1PUF.
Your presentation is scheduled for: June 4.

Have Fun!

Greg Buhrman
[[Image:1puf.png|left|200px]]


{{STRUCTURE_1puf| PDB=1puf | SCENE= }}

===Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA===


{{ABSTRACT_PUBMED_12923056}}

==About this Structure==
[[1puf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PUF OCA].

==See Also==
*[[Tomato aspermy virus protein 2b Suppression of RNA Silencing]]
*[[User:Wayne Decatur/Tomato aspermy virus protein 2b Suppression of RNA Silencing]]

==Reference==
<ref group="xtra">PMID:12923056</ref><references group="xtra"/>
[[Category: Homo sapiens]]
[[Category: Mus musculus]]
[[Category: Laronde-Leblanc, N A.]]
[[Category: Wolberger, C.]]
[[Category: Homeodomain interaction]]
[[Category: Homeodomian]]
[[Category: Hox hexapeptide]]
[[Category: Protein-dna complex]]
[[Category: Tale homeodomain]]
[[Category: Transcription/dna complex]]

Sandbox Reserved 560

2012-05-24T17:49:45Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Michael,
Here is your very own Proteopedia Page to play with for pdb code: 2V89.
Your presentation date is: June 6.
Have Fun!

Greg Buhrman

[[Image:2v89.png|left|200px]]


{{STRUCTURE_2v89| PDB=2v89 | SCENE= }}

===CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 PEPTIDE AT 1.1A RESOLUTION===

==About this Structure==
2V89 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V89 OCA].

==Reference==
<ref group="xtra">PMID:18025461</ref><references group="xtra"/>
[[Category: Mus musculus]]
[[Category: Ramon-Maiques, S.]]
[[Category: Yang, W.]]
[[Category: Covalent modification]]
[[Category: Dna recombination]]
[[Category: Dna-binding]]

Sandbox Reserved 559

2012-05-24T17:44:12Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Jacob,
Here is your very own Proteopedia Page for pdb code: 2RH1.
Your presentation is scheduled for: June 20.

Have Fun!

Greg Buhrman
[[Image:2rh1.png|left|200px]]


{{STRUCTURE_2rh1| PDB=2rh1 | SCENE= }}

===High resolution crystal structure of human B2-adrenergic G protein-coupled receptor.===


{{ABSTRACT_PUBMED_17962520}}

==About this Structure==
[[2rh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens,_enterobacteria_phage_t4 Homo sapiens, enterobacteria phage t4]. The April 2008 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Adrenergic Receptors'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2008_4 10.2210/rcsb_pdb/mom_2008_4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RH1 OCA].

==See Also==
*[[Beta-2 Adrenergic Receptor]]
*[[Group:SMART:A Physical Model of the β2-Adrenergic Receptor]]
*[[Group:SMART:Tangible Models of Cdc42 Interacting With Intersectin]]
*[[User:Frieda S. Reichsman]]

==Reference==
<ref group="xtra">PMID:017962520</ref><ref group="xtra">PMID:017962519</ref><references group="xtra"/>
[[Category: Adrenergic Receptors]]
[[Category: Homo sapiens, enterobacteria phage t4]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: ATCG3D, Accelerated Technologies Center for Gene to 3D Structure.]]
[[Category: Cherezov, V.]]
[[Category: Choi, H J.]]
[[Category: Hanson, M A.]]
[[Category: Kobilka, B K.]]
[[Category: Kobilka, T S.]]
[[Category: Kuhn, P.]]
[[Category: Rasmussen, S G.F.]]
[[Category: Rosenbaum, D M.]]
[[Category: Stevens, R C.]]
[[Category: Thian, F S.]]
[[Category: Weis, W I.]]
[[Category: 7tm]]
[[Category: Accelerated technologies center for gene to 3d structure]]
[[Category: Adrenergic]]
[[Category: Atcg3d]]
[[Category: Cholesterol]]
[[Category: Fusion]]
[[Category: Gpcr]]
[[Category: Lipidic]]
[[Category: Lipidic cubic phase]]
[[Category: Membrane protein]]
[[Category: Membrane protein / hydrolase complex]]
[[Category: Mesophase]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]

Sandbox Reserved 558

2012-05-24T17:41:21Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Blair,
Here is your very own Proteopedia Page for pdb code: 3EP2.
Your presentation is scheduled for: June 11.

Have Fun!

Greg Buhrman
[[Image:3ep2.png|left|200px]]


{{STRUCTURE_3ep2| PDB=3ep2 | SCENE= }}

===Model of Phe-tRNA(Phe) in the ribosomal pre-accommodated state revealed by cryo-EM===


{{ABSTRACT_PUBMED_19020518}}

==About this Structure==
[[3ep2]] is a 9 chain structure of [[Ribosomal protein S12]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EP2 OCA].

==See Also==
*[[Ribosomal protein S12]]

==Reference==
<ref group="xtra">PMID:19020518</ref><references group="xtra"/>
[[Category: Escherichia coli k12]]
[[Category: Agirrezabala, X.]]
[[Category: Frank, J.]]
[[Category: Li, W.]]
[[Category: A/t-trna]]
[[Category: Acetylation]]
[[Category: Antibiotic resistance]]
[[Category: Automated data collection]]
[[Category: Cytoplasm]]
[[Category: Elongation factor]]
[[Category: Gtp-binding]]
[[Category: Membrane]]
[[Category: Methylation]]
[[Category: Nucleotide-binding]]
[[Category: Phosphoprotein]]
[[Category: Protein biosynthesis]]
[[Category: Protein translation]]
[[Category: Ribonucleoprotein]]
[[Category: Ribosomal protein]]
[[Category: Ribosomal protein/rna complex]]
[[Category: Rna-binding]]
[[Category: Rrna-binding]]
[[Category: Ternary complex]]
[[Category: Trna-binding]]

Sandbox Reserved 557

2012-05-24T17:35:50Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Morgan,
Here is your very own Proteopedia Page for pdb code: 3CLN.
Your presentation is scheduled for: June 20.

Have Fun!

Greg Buhrman
[[Image:3cln.png|left|200px]]


{{STRUCTURE_3cln| PDB=3cln | SCENE= }}

===STRUCTURE OF CALMODULIN REFINED AT 2.2 ANGSTROMS RESOLUTION===


{{ABSTRACT_PUBMED_3145979}}

==About this Structure==
3CLN is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1cln 1cln]. The August 2003 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Calmodulin'' by Shuchismita Dutta and David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2003_8 10.2210/rcsb_pdb/mom_2003_8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLN OCA].

==Reference==
<ref group="xtra">PMID:3145979</ref><references group="xtra"/>
[[Category: Calmodulin]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Rattus rattus]]
[[Category: Babu, Y S.]]
[[Category: Bugg, C E.]]
[[Category: Cook, W J.]]
[[Category: Calcium binding protein]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jan 21 10:12:27 2010''

Sandbox Reserved 556

2012-05-24T17:32:51Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Jay,
Here is your very own Proteopedia Page for pdb code: 3K8Y.
Your presentation is scheduled for: June 20.

Have Fun!

Greg Buhrman
[[Image:3k8y.png|left|200px]]


{{STRUCTURE_3k8y| PDB=3k8y | SCENE= }}

===Allosteric modulation of H-Ras GTPase===


{{ABSTRACT_PUBMED_20194776}}

==About this Structure==
3K8Y is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K8Y OCA].

==Reference==
<ref group="xtra">PMID:20194776</ref><references group="xtra"/>
[[Category: Homo sapiens]]
[[Category: Buhrman, G.]]
[[Category: Holzapfel, G.]]
[[Category: Mattos, C.]]
[[Category: Acetylation]]
[[Category: Cell membrane]]
[[Category: Disease mutation]]
[[Category: Golgi apparatus]]
[[Category: Gtp-binding]]
[[Category: Lipoprotein]]
[[Category: Membrane]]
[[Category: Methylation]]
[[Category: Nucleotide-binding]]
[[Category: Oncoprotein]]
[[Category: Palmitate]]
[[Category: Prenylation]]
[[Category: Protein-nucleotide complex]]
[[Category: Proto-oncogene]]
[[Category: S-nitrosylation]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 12 10:34:56 2010''

Sandbox Reserved 555

2012-05-24T17:28:48Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Tyler,

Here is your very own Protopedia page for pdb code: 1JFF.
Your presentation date is scheduled for: June 14.

Have Fun!

Greg Buhrman
[[Image:1jff.png|left|200px]]


{{STRUCTURE_1jff| PDB=1jff | SCENE= }}

===Refined structure of alpha-beta tubulin from zinc-induced sheets stabilized with taxol===


{{ABSTRACT_PUBMED_11700061}}

==About this Structure==
[[1jff]] is a 2 chain structure of [[Tubulin]] with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JFF OCA].

==See Also==
*[[Tubulin]]

==Reference==
<ref group="xtra">PMID:11700061</ref><references group="xtra"/>
[[Category: Bos taurus]]
[[Category: Downing, K H.]]
[[Category: Li, H.]]
[[Category: Lowe, J.]]
[[Category: Nogales, E.]]
[[Category: Dimer]]
[[Category: Gtpase]]
[[Category: Structural protein]]

Sandbox Reserved 554

2012-05-24T17:25:18Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Lisa,

Here is your very own Protopedia page for pdb code: 3MJG.
Your presentation date is scheduled for: June 20.

Have Fun!

Greg Buhrman
[[Image:3mjg.png|left|200px]]


{{STRUCTURE_3mjg| PDB=3mjg | SCENE= }}

===The structure of a platelet derived growth factor receptor complex===


{{ABSTRACT_PUBMED_20534510}}

==About this Structure==
3MJG is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MJG OCA].

==Reference==
<ref group="xtra">PMID:20534510</ref><references group="xtra"/>
[[Category: Homo sapiens]]
[[Category: Receptor protein-tyrosine kinase]]
[[Category: He, X.]]
[[Category: Shim, A H.R.]]
[[Category: Growth factor-receptor complex]]
[[Category: Hormone-transferase complex]]
[[Category: Protein-protein complex]]
[[Category: Transferase-hormone complex]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 18 11:07:32 2010''

Sandbox Reserved 553

2012-05-24T17:20:40Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Alex,
Here is your very own Protopedia page for pdb code: 2WDK.
Your presentation date is scheduled for: June 11.

Have Fun!

Greg Buhrman
[[Image:2wdk.png|left|200px]]


{{STRUCTURE_2wdk| PDB=2wdk | SCENE= }}

===STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH MRNA, PAROMOMYCIN, ACYLATED A- AND P-SITE TRNAS, AND E-SITE TRNA. THIS FILE CONTAINS THE 30S SUBUNIT A-,P-, AND E-SITE TRNAS AND PAROMOMYCIN FOR MOLECULE I.===


{{ABSTRACT_PUBMED_19363482}}

==About this Structure==
[[2wdk]] is a 25 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S15]], [[Ribosomal protein S17]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein THX]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WDK OCA].

==See Also==
*[[Ribosomal protein S10]]
*[[Ribosomal protein S11]]
*[[Ribosomal protein S12]]
*[[Ribosomal protein S13]]
*[[Ribosomal protein S15]]
*[[Ribosomal protein S17]]
*[[Ribosomal protein S2]]
*[[Ribosomal protein S20]]
*[[Ribosomal protein S3]]
*[[Ribosomal protein S4]]
*[[Ribosomal protein THX]]
*[[Ribosome]]

==Reference==
<ref group="xtra">PMID:19363482</ref><references group="xtra"/>
[[Category: 70S Ribosomes]]
[[Category: Escherichia coli]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Thermus thermophilus]]
[[Category: Kelley, A C.]]
[[Category: Loakes, D.]]
[[Category: Ramakrishnan, V.]]
[[Category: Voorhees, R M.]]
[[Category: Weixlbaumer, A.]]
[[Category: Coiled coil]]
[[Category: Metal-binding]]
[[Category: Mrna]]
[[Category: Ribonucleoprotein]]
[[Category: Ribosomal protein]]
[[Category: Ribosome]]
[[Category: Rna-binding]]
[[Category: Rrna-binding]]
[[Category: Translation]]
[[Category: Trna]]
[[Category: Trna-binding]]
[[Category: Zinc]]
[[Category: Zinc-finger]]

Sandbox Reserved 552

2012-05-24T17:16:59Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Alex,
Here is your very own proteopedia page for pdb code: 1HKB.
Your presentation date is scheduled for: June 8.
Have Fun!

Greg Buhrman
[[Image:1hkb.png|left|200px]]


{{STRUCTURE_1hkb| PDB=1hkb | SCENE= }}

===CRYSTAL STRUCTURE OF RECOMBINANT HUMAN BRAIN HEXOKINASE TYPE I COMPLEXED WITH GLUCOSE AND GLUCOSE-6-PHOSPHATE===


{{ABSTRACT_PUBMED_9493266}}

==About this Structure==
1HKB is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HKB OCA].

==Reference==
<ref group="xtra">PMID:9493266</ref><references group="xtra"/>
[[Category: Hexokinase]]
[[Category: Homo sapiens]]
[[Category: Aleshin, A E.]]
[[Category: Bartunik, H D.]]
[[Category: Burenkov, G P.]]
[[Category: Fromm, H J.]]
[[Category: Honzatko, R B.]]
[[Category: Zeng, C.]]
[[Category: Allosteric enzyme]]
[[Category: Glucose]]
[[Category: Glucose-6-phosphate]]
[[Category: Glycolysis]]
[[Category: Phosphotransferase]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 22 14:51:34 2010''

Sandbox Reserved 551

2012-05-24T17:08:48Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Daniel,
Here is your very own Proteopedia Page to play with for pdb code: 2V89.
Your presentation date is: June 6.
Have Fun!

Greg Buhrman

[[Image:2v89.png|left|200px]]


{{STRUCTURE_2v89| PDB=2v89 | SCENE= }}

===CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 PEPTIDE AT 1.1A RESOLUTION===

==About this Structure==
2V89 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V89 OCA].

==Reference==
<ref group="xtra">PMID:18025461</ref><references group="xtra"/>
[[Category: Mus musculus]]
[[Category: Ramon-Maiques, S.]]
[[Category: Yang, W.]]
[[Category: Covalent modification]]
[[Category: Dna recombination]]
[[Category: Dna-binding]]

Sandbox Reserved 551

2012-05-24T17:07:37Z

Greg Buhrman:

{{NCSU_BIOL414_Sandbox}}

Hi Daniel,
Here is your very own Proteopedia Page to play with for pdb code: 2V89.
Your presentation date is: June 6.
Have Fun!

Greg Buhrman
{{Seed}}
[[Image:2v89.png|left|200px]]


{{STRUCTURE_2v89| PDB=2v89 | SCENE= }}

===CRYSTAL STRUCTURE OF RAG2-PHD FINGER IN COMPLEX WITH H3K4ME3 PEPTIDE AT 1.1A RESOLUTION===

==About this Structure==
2V89 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V89 OCA].

==Reference==
<ref group="xtra">PMID:18025461</ref><references group="xtra"/>
[[Category: Mus musculus]]
[[Category: Ramon-Maiques, S.]]
[[Category: Yang, W.]]
[[Category: Covalent modification]]
[[Category: Dna recombination]]
[[Category: Dna-binding]]

Sandbox Reserved 551

2012-05-24T17:04:19Z

Greg Buhrman:

User:Greg Buhrman/Sandbox 1

2012-05-22T18:54:39Z

Greg Buhrman: New page: OK This is a page I am messing around with

OK This is a page I am messing around with

User:Greg Buhrman

2012-05-22T18:53:08Z

Greg Buhrman:

* Full Real Name: Greg Buhrman

* Position: Instructor

* Institution (NO ABBREVIATIONS): North Carolina State University

* City, State/Province, Country: Raleigh, NC, USA

* Field of Expertise or Study: protein crystallography, structural biology, cancer biology, protein-dna interactions, transcription factors

*[[User:Greg Buhrman/Sandbox 1]]