Proteopedia - User contributions [en]

File:Rho1.pdb

2009-02-09T13:15:26Z

Marc Boudvillain:

this is the closed hexameric form of transcription termination factor Rho from E. coli (original pdb ID is 2ht1; structure solved by the Berger lab)
<applet load='rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' />
<scene name='Image:Rho1.pdb/Rho_closed2/1'>In another view (click on text), the primary binding site is in blue, P-loop in light orange, R-loop in orange, and Q-loop in red</scene>

File:Rho1.pdb

2009-02-09T13:14:51Z

Marc Boudvillain:

this is the closed hexameric form of transcription termination factor Rho from E. coli (original pdb ID is 2ht1; structure solved by the Berger lab)
<applet load='rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' />
<scene name='Image:Rho1.pdb/Rho_closed2/1'>Primary binding site is in blue, P-loop in light orange, R-loop in orange, and Q-loop in red</scene>

File:Rho1.pdb

2009-02-09T13:13:58Z

Marc Boudvillain:

Transcription Termination Factor Rho

2008-11-19T13:02:37Z

Marc Boudvillain:

'''Transcription termination factor Rho''' is a ring-shaped RNA-DNA '''helicase''' that induces release of transcription complexes at specific locci of bacterial genomes. Several structures of Rho in various liganted states haven been solved by X-ray cristallography by the Berger lab (Berkeley). Here is one representation showing the Rho hexamer in a closed state and with RNA fragments occupying both its primary and secondary binding sites.
<applet load='Rho1.pdb' size='300' frame='true' align='right' scene='Transcription_Termination_Factor_Rho/Rho_closed_1/3'>

Transcription Termination Factor Rho

2008-11-19T12:59:57Z

Marc Boudvillain:

Transcription Termination Factor Rho

2008-11-19T12:57:30Z

Marc Boudvillain:

'''Transcription termination factor Rho''' is a ring-shaped RNA-DNA '''helicase''' that induces release of transcription complexes at specific locci of bacterial genomes. Several structures of Rho in various liganted states haven been solved by X-ray cristallography by the Berger lab (Berkeley). Here is one representation showing the Rho hexamer in a closed state and with RNA fragments occupying both its primary and secondary binding sites.
<applet load='Rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' /
<scene name='Transcription_Termination_Factor_Rho/Rho_closed_1/2'>TextToBeDisplayed</scene>

Transcription Termination Factor Rho

2008-11-19T12:56:24Z

Marc Boudvillain:

'''Transcription termination factor Rho''' is a ring-shaped RNA-DNA '''helicase''' that induces release of transcription complexes at specific locci of bacterial genomes. Several structures of Rho in various liganted states haven been solved by X-ray cristallography by the Berger lab (Berkeley). Here is one representation showing the Rho hexamer in a closed state and with RNA fragments occupying both its primary and secondary binding sites.
<applet load='Rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' />

{{STRUCTURE_Rho1.pdb | PDB=Rho1.pdb | SCENE=Transcription_Termination_Factor_Rho/Rho_closed_1/2 }}

Transcription Termination Factor Rho

2008-11-19T12:29:02Z

Marc Boudvillain:

'''Transcription termination factor Rho''' is a ring-shaped RNA-DNA '''helicase''' that induces release of transcription complexes at specific locci of bacterial genomes. Several structures of Rho in various liganted states haven been solved by X-ray cristallography by the Berger lab (Berkeley). Here is one representation showing the Rho hexamer in a closed state and with RNA fragments occupying both its primary and secondary binding sites.
<applet load='Rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' />

{{STRUCTURE_Rho1.pdb | PDB=Rho1.pdb | SCENE= }}

Transcription Termination Factor Rho

2008-11-19T12:28:06Z

Marc Boudvillain:

'''Transcription termination factor Rho''' induces release of transcription complexes at specific locci of bacterial genomes. Several structures of Rho in various liganted states haven been solved by X-ray cristallography by the Berger lab (Berkeley). Here is one representation showing the Rho hexamer in a closed state and with RNA fragments occupying both its primary and secondary binding sites.
<applet load='Rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' />

{{STRUCTURE_Rho1.pdb | PDB=Rho1.pdb | SCENE= }}

Transcription Termination Factor Rho

2008-11-19T12:24:59Z

Marc Boudvillain:

'''Transcription termination factor Rho''' induces release of transcription complexes at specific locci of bacterial genomes
<applet load='Rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' />

{{STRUCTURE_Rho1.pdb | PDB=Rho1.pdb | SCENE= }}

Transcription Termination Factor Rho

2008-11-19T12:16:21Z

Marc Boudvillain:

<applet load='Rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' />{{STRUCTURE_Rho1.pdb | PDB=Rho1.pdb | SCENE= }}

Transcription Termination Factor Rho

2008-11-19T12:15:17Z

Marc Boudvillain:

Transcription Termination Factor Rho

2008-11-19T12:13:43Z

Marc Boudvillain: New page: ==This is a placeholder== This is a placeholder text to help you get started in placing a Jmol applet on your page. At any time, click "Show Preview" at the bottom of this page to see how...

==This is a placeholder==
This is a placeholder text to help you get started in
placing a Jmol applet on your page. At any time, click
"Show Preview" at the bottom of this page to see how it goes.

Replace the PDB id after the STRUCTURE_ and after PDB= to load
and display another structure.

{{STRUCTURE_Rho hexamer | PDB=Rho1.pdb | SCENE= }}

File:Rho1.pdb

2008-11-19T11:00:23Z

Marc Boudvillain:

File:Rho1.pdb

2008-11-19T11:00:07Z

Marc Boudvillain:

this is the closed hexameric form of transcription termination factor Rho from E. coli (original pdb ID is 2ht1; structure solved by the Berger lab)
<applet load='2ht1' size='300' frame='true' align='right' caption='Insert caption here' />

File:Rho1.pdb

2008-11-19T10:59:28Z

Marc Boudvillain:

File:Rho1.pdb

2008-11-19T10:58:54Z

Marc Boudvillain:

this is the closed hexameric form of transcription termination factor Rho from E. coli (original pdb ID is 2ht1; structure solved by the Berger lab)
<applet load='Rho1.pdb' size='300' frame='true' align='right' caption='Insert caption here' />
<scene name='Image:Rho1.pdb/Rho_closed/2'>Rho closed</scene>

File:Rho1.pdb

2008-11-19T10:52:30Z

Marc Boudvillain:

File:Rho1.pdb

2008-11-19T10:46:56Z

Marc Boudvillain:

File:Rho1.pdb

2008-11-19T10:45:38Z

Marc Boudvillain:

this is the closed hexameric form of transcription termination factor Rho from E. coli (original pdb ID is 2ht1; structure solved by the Berger lab)
<applet load='Insert PDB code or filename here' size='300' frame='true' align='right' caption='Insert caption here' />
<scene name='Image:Rho1.pdb/Rho_closed/2'>Rho closed</scene>

File:Rho1.pdb

2008-11-19T10:41:24Z

Marc Boudvillain:

this is the closed hexameric form of transcription termination factor Rho from E. coli (original pdb ID is 2ht1; structure solved by the Berger lab)
<scene name='Image:Rho1.pdb/Rho_closed/1'>closed Rho</scene>

File:Rho1.pdb

2008-11-19T10:36:38Z

Marc Boudvillain:

File:Rho1.pdb

2008-11-19T10:29:42Z

Marc Boudvillain:

this is the closed hexameric form of transcription termination factor Rho from E. coli (original pdb ID is 2ht1; structure solved by the Berger lab)

File:Rho1.pdb

2008-11-19T10:28:14Z

Marc Boudvillain: this is the closed hexameric form of transcription termination factor (original pdb ID is 2ht1)

this is the closed hexameric form of transcription termination factor (original pdb ID is 2ht1)

File:Rho-closed merged.pdb

2008-11-19T10:22:21Z

Marc Boudvillain:

File:Rho-closed merged.pdb

2008-11-19T10:07:40Z

Marc Boudvillain: