View source for 1qrj


==Solution structure of htlv-i capsid protein==
<StructureSection load='1qrj' size='340' side='right'caption='[[1qrj]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1qrj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_T-cell_lymphotrophic_virus_type_1_(strain_ATK) Human T-cell lymphotrophic virus type 1 (strain ATK)]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QRJ FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qrj OCA], [https://pdbe.org/1qrj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qrj RCSB], [https://www.ebi.ac.uk/pdbsum/1qrj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qrj ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GAG_HTL1A GAG_HTL1A] Matrix protein p19 targets Gag, Gag-Pro and Gag-Pro-Pol polyproteins to the plasma membrane via a multipartite membrane binding signal, that includes its myristoylated N-terminus. Also mediates nuclear localization of the preintegration complex (By similarity).  Capsid protein p24 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex (By similarity).  Nucleocapsid protein p15 is involved in the packaging and encapsidation of two copies of the genome (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qr/1qrj_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qrj ConSurf].
<div style="clear:both"></div>

==See Also==
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Campos-Olivas R]]
[[Category: Clark CA]]
[[Category: Khorasanizadeh S]]
[[Category: Summers MF]]