View source for 2ium


==Structure of the C-terminal head domain of the avian adenovirus CELO long fibre (C2 crystal form)==
<StructureSection load='2ium' size='340' side='right'caption='[[2ium]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2ium]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Fowl_aviadenovirus_1 Fowl aviadenovirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IUM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IUM FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ium FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ium OCA], [https://pdbe.org/2ium PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ium RCSB], [https://www.ebi.ac.uk/pdbsum/2ium PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ium ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SPIK1_ADEG1 SPIK1_ADEG1] Forms spikes that protrude from each vertex of the icosahedral capsid. Interacts with host receptor to provide virion initial attachment to target cell. Fiber proteins are shed during virus entry, when virus is still at the cell surface (By similarity).
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== Publication Abstract from PubMed ==
Avian adenovirus CELO (chicken embryo lethal orphan virus, fowl adenovirus type 1) incorporates two different homotrimeric fiber proteins extending from the same penton base: a long fiber (designated fiber 1) and a short fiber (designated fiber 2). The short fibers extend straight outwards from the viral vertices, whilst the long fibers emerge at an angle. In contrast to the short fiber, which binds an unknown avian receptor and has been shown to be essential to the invasiveness of this virus, the long fiber appears to be unnecessary for infection in birds. Both fibers contain a short N-terminal virus-binding peptide, a slender shaft domain and a globular C-terminal head domain; the head domain, by analogy with human adenoviruses, is likely to be involved mainly in receptor binding. This study reports the high-resolution crystal structure of the head domain of the long fiber, solved using single isomorphous replacement (using anomalous signal) and refined against data at 1.6 A (0.16 nm) resolution. The C-terminal globular head domain had an anti-parallel beta-sandwich fold formed by two four-stranded beta-sheets with the same overall topology as human adenovirus fiber heads. The presence in the sequence of characteristic repeats N-terminal to the head domain suggests that the shaft domain contains a triple beta-spiral structure. Implications of the structure for the function and stability of the avian adenovirus long fiber protein are discussed; notably, the structure suggests a different mode of binding to the coxsackievirus and adenovirus receptor from that proposed for the human adenovirus fiber heads.

Structure of the C-terminal head domain of the fowl adenovirus type 1 long fiber.,Guardado-Calvo P, Llamas-Saiz AL, Fox GC, Langlois P, van Raaij MJ J Gen Virol. 2007 Sep;88(Pt 9):2407-16. PMID:17698649<ref>PMID:17698649</ref>

From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<div class="pdbe-citations 2ium" style="background-color:#fffaf0;"></div>
== References ==
<references/>
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</StructureSection>
[[Category: Fowl aviadenovirus 1]]
[[Category: Large Structures]]
[[Category: Fox GC]]
[[Category: Guardado-Calvo P]]
[[Category: Llamas-Saiz AL]]
[[Category: Van Raaij MJ]]