View source for 3hqv


==Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, rigid body refinement==
<StructureSection load='3hqv' size='340' side='right'caption='[[3hqv]], [[Resolution|resolution]] 5.16&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3hqv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ygv 1ygv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HQV FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Fiber diffraction, [[Resolution|Resolution]] 5.16&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>, <scene name='pdbligand=LYZ:5-HYDROXYLYSINE'>LYZ</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hqv OCA], [https://pdbe.org/3hqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hqv RCSB], [https://www.ebi.ac.uk/pdbsum/3hqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hqv ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CO1A2_RAT CO1A2_RAT] Type I collagen is a member of group I collagen (fibrillar forming collagen).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hq/3hqv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hqv ConSurf].
<div style="clear:both"></div>

==See Also==
*[[Collagen 3D structures|Collagen 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Rattus norvegicus]]
[[Category: Orgel JP]]