View source for 4cp8


==Structure of the amidase domain of allophanate hydrolase from Pseudomonas sp strain ADP==
<StructureSection load='4cp8' size='340' side='right'caption='[[4cp8]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4cp8]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._ADP Pseudomonas sp. ADP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CP8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4CP8 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLI:MALONATE+ION'>MLI</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4cp8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4cp8 OCA], [https://pdbe.org/4cp8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4cp8 RCSB], [https://www.ebi.ac.uk/pdbsum/4cp8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4cp8 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ATZF_PSESD ATZF_PSESD] Hydrolyzes allophanate to NH(3) and CO(2). Can also use malonamate, but with much lower efficiency.<ref>PMID:11544232</ref> <ref>PMID:15901697</ref> 
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The allophanate hydrolase from Pseudomonas sp. strain ADP, AtzF, provides the final hydrolytic step for the mineralization of s-triazines such as atrazine and cyanuric acid. Indeed, the action of AtzF provides metabolic access to two of the three nitrogens in each triazine ring. The X-ray structure of the N-terminal amidase domain of AtzF reveals that it is highly homologous to allophanate hydrolases involved in a different catabolic process in other organisms (i.e. the mineralization of urea). The smaller C-terminal domain does not appear to have a physiologically-relevant catalytic function, as reported for the allophanate hydrolase of Kluyveromyces lactis, when purified enzyme was tested in vitro. However, the C-terminal domain does have a function in coordinating the quaternary structure of AtzF. Interesting, we also show that AtzF forms a large, ca. 660 kDa, multi-enzyme complex with AtzD and AtzE that is capable of mineralizing cyanuric acid. The function of this complex may be to channel substrates from one active site to the next, effectively protecting unstable metabolites, such as allophanate, from solvent-mediated decarboxylation to a 'dead-end' metabolic product.

X-ray structure of the amidase domain of AtzF, the allophanate hydrolase from the cyanuric acid-mineralizing multienzyme complex.,Balotra S, Newman J, Cowieson NP, French NG, Campbell PM, Briggs LJ, Warden AC, Easton CJ, Peat TS, Scott C Appl Environ Microbiol. 2014 Oct 31. pii: AEM.02783-14. PMID:25362066<ref>PMID:25362066</ref>

From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 4cp8" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pseudomonas sp. ADP]]
[[Category: Balotra S]]
[[Category: French L]]
[[Category: French N]]
[[Category: Newman J]]
[[Category: Peat TS]]
[[Category: Scott C]]