View source for 4ude


==An oligomerization domain confers pioneer properties to the LEAFY master floral regulator==
<StructureSection load='4ude' size='340' side='right'caption='[[4ude]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4ude]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ginkgo_biloba Ginkgo biloba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UDE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UDE FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ude FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ude OCA], [https://pdbe.org/4ude PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ude RCSB], [https://www.ebi.ac.uk/pdbsum/4ude PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ude ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9LLY6_GINBI Q9LLY6_GINBI] 
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Deciphering the mechanisms directing transcription factors (TFs) to specific genome regions is essential to understand and predict transcriptional regulation. TFs recognize short DNA motifs primarily through their DNA-binding domain. Some TFs also possess an oligomerization domain suspected to potentiate DNA binding but for which the genome-wide influence remains poorly understood. Here we focus on the LEAFY transcription factor, a master regulator of flower development in angiosperms. We have determined the crystal structure of its conserved amino-terminal domain, revealing an unanticipated Sterile Alpha Motif oligomerization domain. We show that this domain is essential to LEAFY floral function. Moreover, combined biochemical and genome-wide assays suggest that oligomerization is required for LEAFY to access regions with low-affinity binding sites or closed chromatin. This finding shows that domains that do not directly contact DNA can nevertheless have a profound impact on the DNA binding landscape of a TF.

A SAM oligomerization domain shapes the genomic binding landscape of the LEAFY transcription factor.,Sayou C, Nanao MH, Jamin M, Pose D, Thevenon E, Gregoire L, Tichtinsky G, Denay G, Ott F, Peirats Llobet M, Schmid M, Dumas R, Parcy F Nat Commun. 2016 Apr 21;7:11222. doi: 10.1038/ncomms11222. PMID:27097556<ref>PMID:27097556</ref>

From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 4ude" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Ginkgo biloba]]
[[Category: Large Structures]]
[[Category: Dumas R]]
[[Category: Nanao MH]]
[[Category: Parcy F]]
[[Category: Sayou C]]