View source for 6knc


==PolD-PCNA-DNA (form B)==
<StructureSection load='6knc' size='340' side='right'caption='[[6knc]], [[Resolution|resolution]] 9.30&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[6knc]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis Thermococcus kodakarensis], [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis_KOD1 Thermococcus kodakarensis KOD1] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KNC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6KNC FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 9.3&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6knc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6knc OCA], [https://pdbe.org/6knc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6knc RCSB], [https://www.ebi.ac.uk/pdbsum/6knc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6knc ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5JET1_THEKO Q5JET1_THEKO] Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase.[ARBA:ARBA00024817][HAMAP-Rule:MF_00325]

==See Also==
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
*[[Proliferating cell nuclear antigen 3D structures|Proliferating cell nuclear antigen 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Synthetic construct]]
[[Category: Thermococcus kodakarensis]]
[[Category: Thermococcus kodakarensis KOD1]]
[[Category: Ishino S]]
[[Category: Ishino Y]]
[[Category: Iwasaki K]]
[[Category: Kohda D]]
[[Category: Mayanagi K]]
[[Category: Miyazaki N]]
[[Category: Morikawa K]]
[[Category: Oki K]]
[[Category: Shirai T]]
[[Category: Yamagami T]]