View source for 7lni


==SeMet CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA==
<StructureSection load='7lni' size='340' side='right'caption='[[7lni]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[7lni]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile_630 Clostridioides difficile 630] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LNI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LNI FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.68&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lni FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lni OCA], [https://pdbe.org/7lni PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lni RCSB], [https://www.ebi.ac.uk/pdbsum/7lni PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lni ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q183J3_CLOD6 Q183J3_CLOD6] 
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Clostridioides difficile infections are an urgent medical problem. The newly discovered C. difficile adenine methyltransferase A (CamA) is specified by all C. difficile genomes sequenced to date (&gt;300), but is rare among other bacteria. CamA is an orphan methyltransferase, unassociated with a restriction endonuclease. CamA-mediated methylation at CAAAAA is required for normal sporulation, biofilm formation, and intestinal colonization by C. difficile. We characterized CamA kinetic parameters, and determined its structure bound to DNA containing the recognition sequence. CamA contains an N-terminal domain for catalyzing methyl transfer, and a C-terminal DNA recognition domain. Major and minor groove DNA contacts in the recognition site involve base-specific hydrogen bonds, van der Waals contacts and the Watson-Crick pairing of a rearranged A:T base pair. These provide sufficient sequence discrimination to ensure high specificity. Finally, the surprisingly weak binding of the methyl donor S-adenosyl-L-methionine (SAM) might provide avenues for inhibiting CamA activity using SAM analogs.

Clostridioides difficile specific DNA adenine methyltransferase CamA squeezes and flips adenine out of DNA helix.,Zhou J, Horton JR, Blumenthal RM, Zhang X, Cheng X Nat Commun. 2021 Jun 8;12(1):3436. doi: 10.1038/s41467-021-23693-w. PMID:34103525<ref>PMID:34103525</ref>

From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 7lni" style="background-color:#fffaf0;"></div>

==See Also==
*[[DNA methyltransferase 3D structures|DNA methyltransferase 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Clostridioides difficile 630]]
[[Category: Large Structures]]
[[Category: Synthetic construct]]
[[Category: Cheng X]]
[[Category: Horton JR]]
[[Category: Zhou J]]