View source for 7zqi


==MHC class I from a wild bird in complex with a nonameric peptide P2==
<StructureSection load='7zqi' size='340' side='right'caption='[[7zqi]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[7zqi]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Acrocephalus_arundinaceus Acrocephalus arundinaceus] and [https://en.wikipedia.org/wiki/Vibrio_sp. Vibrio sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ZQI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ZQI FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7zqi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7zqi OCA], [https://pdbe.org/7zqi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7zqi RCSB], [https://www.ebi.ac.uk/pdbsum/7zqi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7zqi ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O98187_ACRAR O98187_ACRAR] Involved in the presentation of foreign antigens to the immune system.[ARBA:ARBA00002297]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Long-distance migratory animals such as birds and bats have evolved to withstand selection imposed by pathogens across the globe, and pathogen richness is known to be particularly high in tropical regions. Immune genes, so-called Major Histocompatibility Complex (MHC) genes, are highly duplicated in songbirds compared to other vertebrates, and this high MHC diversity has been hypothesised to result in a unique adaptive immunity. To understand the rationale behind the evolution of the high MHC genetic diversity in songbirds, we determined the structural properties of an MHC class I protein, Acar3, from a long-distance migratory songbird, the great reed warbler Acrocephalus arundinaceus (in short: Acar). The structure of Acar3 was studied in complex with pathogen-derived antigens and shows an overall antigen presentation similar to human MHC class I. However, the peptides bound to Acar3 display an unusual conformation: Whereas the N-terminal ends of the peptides display enhanced flexibility, the conformation of their C-terminal halves is rather static. This uncommon peptide-binding mode in Acar3 is facilitated by a central Arg residue within the peptide-binding groove that fixes the backbone of the peptide at its central position, and potentially permits successful interactions between MHC class I and innate immune receptors. Our study highlights the importance of investigating the immune system of wild animals, such as birds and bats, to uncover unique immune mechanisms which may neither exist in humans nor in model organisms.

The structure of songbird MHC class I reveals antigen binding that is flexible at the N-terminus and static at the C-terminus.,Eltschkner S, Mellinger S, Buus S, Nielsen M, Paulsson KM, Lindkvist-Petersson K, Westerdahl H Front Immunol. 2023 Jul 7;14:1209059. doi: 10.3389/fimmu.2023.1209059. , eCollection 2023. PMID:37483599<ref>PMID:37483599</ref>

From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 7zqi" style="background-color:#fffaf0;"></div>

==See Also==
*[[MHC 3D structures|MHC 3D structures]]
*[[MHC I 3D structures|MHC I 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Acrocephalus arundinaceus]]
[[Category: Large Structures]]
[[Category: Vibrio sp]]
[[Category: Buus S]]
[[Category: Eltschkner S]]
[[Category: Lindkvist-Petersson K]]
[[Category: Mellinger S]]
[[Category: Nielsen M]]
[[Category: Paulsson KM]]
[[Category: Westerdahl H]]