View source for 8k70


==Structural basis for the distinct roles of non-conserved Pro116 and conserved Tyr124 of BCH domain of yeast p50RhoGAP==
<StructureSection load='8k70' size='340' side='right'caption='[[8k70]], [[Resolution|resolution]] 2.81&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[8k70]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Schizosaccharomyces_pombe_972h- Schizosaccharomyces pombe 972h-]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8K70 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8K70 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.81&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8k70 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8k70 OCA], [https://pdbe.org/8k70 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8k70 RCSB], [https://www.ebi.ac.uk/pdbsum/8k70 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8k70 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YIL2_SCHPO YIL2_SCHPO] 
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
p50RhoGAP is a key protein that interacts with and downregulates the small GTPase RhoA. p50RhoGAP is a multifunctional protein containing the BNIP-2 and Cdc42GAP Homology (BCH) domain that facilitates protein-protein interactions and lipid binding and the GAP domain that regulates active RhoA population. We recently solved the structure of the BCH domain from yeast p50RhoGAP ((Y)BCH) and showed that it maintains the adjacent GAP domain in an auto-inhibited state through the beta5 strand. Our previous WT (Y)BCH structure shows that a unique kink at position 116 thought to be made by a proline residue between alpha helices alpha6 and alpha7 is essential for the formation of intertwined dimer from asymmetric monomers. Here we sought to establish the role and impact of this Pro116. However, the kink persists in the structure of P116A mutant (Y)BCH domain, suggesting that the scaffold is not dictated by the proline residue at this position. We further identified Tyr124 (or Tyr188 in (H)BCH) as a conserved residue in the crucial beta5 strand. Extending to the human ortholog, when substituted to acidic residues, Tyr188D or Tyr188E, we observed an increase in RhoA binding and self-dimerization, indicative of a loss of inhibition of the GAP domain by the BCH domain. These results point to distinct roles and impact of the non-conserved and conserved amino acid positions in regulating the structural and functional complexity of the BCH domain.

Structural basis for the distinct roles of non-conserved Pro116 and conserved Tyr124 of BCH domain of yeast p50RhoGAP.,Shankar S, Chew TW, Chichili VPR, Low BC, Sivaraman J Cell Mol Life Sci. 2024 May 13;81(1):216. doi: 10.1007/s00018-024-05238-8. PMID:38740643<ref>PMID:38740643</ref>

From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 8k70" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Schizosaccharomyces pombe 972h-]]
[[Category: Shankar S]]
[[Category: Sivaraman J]]