View source for 8vn5


==Homing endonuclease I-PpoI-DNA complex:ground state at pH8.0 (Tris) with Na+==
<StructureSection load='8vn5' size='340' side='right'caption='[[8vn5]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[8vn5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Physarum_polycephalum Physarum polycephalum] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8VN5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8VN5 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8vn5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8vn5 OCA], [https://pdbe.org/8vn5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8vn5 RCSB], [https://www.ebi.ac.uk/pdbsum/8vn5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8vn5 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PPO1_PHYPO PPO1_PHYPO] Mediates the homing of a group I intron in the ribosomal DNA. Makes a four-base staggered cut in its ribosomal DNA target sequence.
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</StructureSection>
[[Category: Large Structures]]
[[Category: Physarum polycephalum]]
[[Category: Synthetic construct]]
[[Category: Chang C]]
[[Category: Gao Y]]