View source for 9iib


==Crystal structure of NodD-EBD (Effector Binding Domain) in complex with hesperetin from Rhizobium leguminosarum bv. vicae 3841==
<StructureSection load='9iib' size='340' side='right'caption='[[9iib]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[9iib]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhizobium_leguminosarum Rhizobium leguminosarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9IIB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9IIB FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6JP:(2S)-5,7-DIHYDROXY-2-(3-HYDROXY-4-METHOXYPHENYL)-2,3-DIHYDRO-4H-1-BENZOPYRAN-4-ONE'>6JP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9iib FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9iib OCA], [https://pdbe.org/9iib PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9iib RCSB], [https://www.ebi.ac.uk/pdbsum/9iib PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9iib ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A6P0BW74_RHILE A0A6P0BW74_RHILE] NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers.[ARBA:ARBA00003502]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Rhizobium leguminosarum]]
[[Category: Dong S]]
[[Category: Jeremy M]]
[[Category: Ruan Y]]
[[Category: Zhang Y]]