View source for User:Wayne Decatur/SandboxYeastRibosome

==Yeast Ribosome based on Cryo-EM and RNA and Protein Homology Modeling==
{{Template:80ScryoRIBO}}
Atomic model of a eukaryotic [[ribosome]] obtained by combined cryo-EM and RNA and protein homology modeling. Specifically, cryo-EM reconstruction of the 80S ribosome from the thermophilic fungus ''Thermomyces lanuginosus'' was used as a guide guide for building homology models of the ''S. cerevisiae'' ribosomal proteins and rRNA sequences that fit the cryo-EM map.
{{Link Toggle FancyCartoonHighQualityView}}. <!--load pdb from uploaded file  3jyxwvALPHAC.pdb.gz‎   -->

==About this Structure==
This structure is a composite of 3 pdb files optimized for use online:<br>
[[3jyx]] is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermomyces_lanuginosus Thermomyces lanuginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYX OCA].<br>
[[3jyw]] is a 30 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermomyces_lanuginosus Thermomyces lanuginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYW OCA].<br>
[[3jyv]] is a 19 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermomyces_lanuginosus Thermomyces lanuginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JYV OCA].<br> 


<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/1'>Testing undo</scene>

<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/2'>Test 76</scene>

<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/3'>Test 110</scene>

<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/4'>Test 116</scene>


<scene name='User:Wayne_Decatur/SandboxYeastRibosome/Undotest/5'>Test dots</scene>

==Reference==
<ref group="xtra">PMID: 20004163 </ref><references group="xtra"/>
[[Category: Thermomyces lanuginosus]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Devkota, B.]]
[[Category: Frank, J.]]
[[Category: Harvey, S C.]]
[[Category: Huang, A D.]]
[[Category: Narayanan, E.]]
[[Category: Sali, A.]]
[[Category: Taylor, D J.]]
[[Category: Topf, M.]]
[[Category: 80S]]
[[Category: Eukaryotic ribosome]]
[[Category: Flexible fitting]]
[[Category: Rack1 protein]]