1eo7 - Revision history

OCA at 23:56, 20 November 2024

2024-11-20T23:56:16Z

← Older revision		Revision as of 23:56, 20 November 2024
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	<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Niallia_circulans Niallia circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Niallia_circulans Niallia circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>
	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.48Å</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.48Å</td></tr>
	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900009:alpha-maltotriose'>PRD_900009</scene>, <scene name='pdbligand=PRD_900010:alpha-maltotetraose'>PRD_900010</scene>, <scene name='pdbligand=PRD_900035:alpha-maltohexaose'>PRD_900035</scene></td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [https://pdbe.org/1eo7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [https://www.ebi.ac.uk/pdbsum/1eo7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eo7 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [https://pdbe.org/1eo7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [https://www.ebi.ac.uk/pdbsum/1eo7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eo7 ProSAT]</span></td></tr>
	</table>		</table>
Line 15:		Line 15:
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/1eo7_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/1eo7_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>

OCA at 06:00, 9 August 2023

2023-08-09T06:00:19Z

← Older revision		Revision as of 06:00, 9 August 2023
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	<StructureSection load='1eo7' size='340' side='right'caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>		<StructureSection load='1eo7' size='340' side='right'caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_24 Atcc 24~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Niallia_circulans Niallia circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>
	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>~~, ~~<scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>~~</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.48Å</td></tr>
	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]~~</~~div~~><~~/td~~></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900009:alpha-maltotriose'>PRD_900009</scene>, <scene name='pdbligand=PRD_900010:alpha-maltotetraose'>PRD_900010</scene>, <scene name='pdbligand=PRD_900035:alpha-maltohexaose'>PRD_900035</scene></td></tr>
	<~~tr id~~='~~activity~~'><~~td class="sblockLbl"~~><~~b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[https://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19]~~ </~~span~~></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [https://pdbe.org/1eo7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [https://www.ebi.ac.uk/pdbsum/1eo7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eo7 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [https://pdbe.org/1eo7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [https://www.ebi.ac.uk/pdbsum/1eo7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eo7 ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/CDGT2_NIACI CDGT2_NIACI]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	~~[[Category: Atcc 24]]~~
	~~[[Category: Cyclomaltodextrin glucanotransferase]]~~
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: ~~Dijkstra, B W~~]]		[[Category: Niallia circulans]]
	[[Category: ~~Uitdehaag, J C.M~~]]		[[Category: Dijkstra BW]]
	[[Category: ~~Alpha-amylase]]~~		[[Category: Uitdehaag JCM]]
	~~[[Category: Catalysis]]~~
	~~[[Category: Cyclodextrin]]~~
	~~[[Category: Family 13 glycosyl hydrolase]]~~
	~~[[Category: Induced fit]]~~
	~~[[Category: Maltohexaose]]~~
	~~[[Category: Oligosaccharide]]~~
	~~[[Category: Transferase]]~~
	~~[[Category: Transglycosylation~~]]

OCA at 09:39, 21 July 2021

2021-07-21T09:39:54Z

← Older revision		Revision as of 09:39, 21 July 2021
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	<StructureSection load='1eo7' size='340' side='right'caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>		<StructureSection load='1eo7' size='340' side='right'caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_24 Atcc 24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_24 Atcc 24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</div></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [~~http~~://pdbe.org/1eo7 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1eo7 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1eo7 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [https://pdbe.org/1eo7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [https://www.ebi.ac.uk/pdbsum/1eo7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eo7 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 08:41, 16 October 2019

2019-10-16T08:41:11Z

← Older revision		Revision as of 08:41, 16 October 2019
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	==BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEXAOSE==		==BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEXAOSE==
	<StructureSection load='1eo7' size='340' side='right' caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>		<StructureSection load='1eo7' size='340' side='right'caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_24 Atcc 24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_24 Atcc 24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>
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	</div>		</div>
	<div class="pdbe-citations 1eo7" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1eo7" style="background-color:#fffaf0;"></div>

			==See Also==
			*[[Glycosyltransferase 3D structures\|Glycosyltransferase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
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	[[Category: Atcc 24]]		[[Category: Atcc 24]]
	[[Category: Cyclomaltodextrin glucanotransferase]]		[[Category: Cyclomaltodextrin glucanotransferase]]
			[[Category: Large Structures]]
	[[Category: Dijkstra, B W]]		[[Category: Dijkstra, B W]]
	[[Category: Uitdehaag, J C.M]]		[[Category: Uitdehaag, J C.M]]

OCA at 07:03, 20 December 2017

2017-12-20T07:03:54Z

← Older revision		Revision as of 07:03, 20 December 2017
Line 1:		Line 1:

	==BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEXAOSE==		==BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEXAOSE==
	<StructureSection load='1eo7' size='340' side='right' caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>		<StructureSection load='1eo7' size='340' side='right' caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>
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	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [http://pdbe.org/1eo7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [http://www.ebi.ac.uk/pdbsum/1eo7 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [http://pdbe.org/1eo7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [http://www.ebi.ac.uk/pdbsum/1eo7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1eo7 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/1eo7_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/1eo7_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 27:		Line 28:
	</div>		</div>
	<div class="pdbe-citations 1eo7" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1eo7" style="background-color:#fffaf0;"></div>

	~~==See Also==~~
	*[[Glycosyltransferase\|Glycosyltransferase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:18, 10 February 2016

2016-02-10T07:18:07Z

← Older revision		Revision as of 07:18, 10 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1eo7 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 06:37, 11 September 2015

2015-09-11T06:37:28Z

← Older revision		Revision as of 06:37, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1eo7' size='340' side='right' caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>		<StructureSection load='1eo7' size='340' side='right' caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_circulans Bacillus circulans~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_24 Atcc 24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [http://www.ebi.ac.uk/pdbsum/1eo7 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [http://pdbe.org/1eo7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [http://www.ebi.ac.uk/pdbsum/1eo7 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 1eo7" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 33:		Line 34:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Bacillus circulans~~]]		[[Category: Atcc 24]]
	[[Category: Cyclomaltodextrin glucanotransferase]]		[[Category: Cyclomaltodextrin glucanotransferase]]
	[[Category: Dijkstra, B W]]		[[Category: Dijkstra, B W]]

OCA at 20:55, 22 December 2014

2014-12-22T20:55:11Z

← Older revision		Revision as of 20:55, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_circulans Bacillus circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_circulans Bacillus circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene><br>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</td></tr>
	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [http://www.ebi.ac.uk/pdbsum/1eo7 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [http://www.ebi.ac.uk/pdbsum/1eo7 PDBsum]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 35:		Line 35:
	[[Category: Bacillus circulans]]		[[Category: Bacillus circulans]]
	[[Category: Cyclomaltodextrin glucanotransferase]]		[[Category: Cyclomaltodextrin glucanotransferase]]
	[[Category: Dijkstra, B W.]]		[[Category: Dijkstra, B W]]
	[[Category: Uitdehaag, J C.M.]]		[[Category: Uitdehaag, J C.M]]
	[[Category: Alpha-amylase]]		[[Category: Alpha-amylase]]
	[[Category: Catalysis]]		[[Category: Catalysis]]

OCA at 11:12, 24 September 2014

2014-09-24T11:12:57Z

← Older revision		Revision as of 11:12, 24 September 2014
Line 1:		Line 1:
	[[Image:~~1eo7~~.~~png~~\|~~left~~\|~~200px~~]]		==BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEXAOSE==
			<StructureSection load='1eo7' size='340' side='right' caption='[[1eo7]], [[Resolution\|resolution]] 2.48Å' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[1eo7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_circulans Bacillus circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1EO7 FirstGlance]. <br>
			</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene><br>
			<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cdg\|1cdg]], [[1eo5\|1eo5]], [[1cxf\|1cxf]], [[1cxk\|1cxk]], [[1cxl\|1cxl]], [[1d3c\|1d3c]]</td></tr>
			<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclomaltodextrin_glucanotransferase Cyclomaltodextrin glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.19 2.4.1.19] </span></td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1eo7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eo7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1eo7 RCSB], [http://www.ebi.ac.uk/pdbsum/1eo7 PDBsum]</span></td></tr>
			<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/1eo7_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			The enzymes from the alpha-amylase family all share a similar alpha-retaining catalytic mechanism but can have different reaction and product specificities. One family member, cyclodextrin glycosyltransferase (CGTase), has an uncommonly high transglycosylation activity and is able to form cyclodextrins. We have determined the 2.0 and 2.5 A X-ray structures of E257A/D229A CGTase in complex with maltoheptaose and maltohexaose. Both sugars are bound at the donor subsites of the active site and the acceptor subsites are empty. These structures mimic a reaction stage in which a covalent enzyme-sugar intermediate awaits binding of an acceptor molecule. Comparison of these structures with CGTase-substrate and CGTase-product complexes reveals three different conformational states for the CGTase active site that are characterized by different orientations of the centrally located residue Tyr 195. In the maltoheptaose and maltohexaose-complexed conformation, CGTase hinders binding of an acceptor sugar at subsite +1, which suggests an induced-fit mechanism that could explain the transglycosylation activity of CGTase. In addition, the maltoheptaose and maltohexaose complexes give insight into the cyclodextrin size specificity of CGTases, since they precede alpha-cyclodextrin (six glucoses) and beta-cyclodextrin (seven glucoses) formation, respectively. Both ligands show conformational differences at specific sugar binding subsites, suggesting that these determine cyclodextrin product size specificity, which is confirmed by site-directed mutagenesis experiments.

	~~{{STRUCTURE_1eo7\| PDB=1eo7 \| SCENE= }}~~		Structures of maltohexaose and maltoheptaose bound at the donor sites of cyclodextrin glycosyltransferase give insight into the mechanisms of transglycosylation activity and cyclodextrin size specificity.,Uitdehaag JC, van Alebeek GJ, van Der Veen BA, Dijkhuizen L, Dijkstra BW Biochemistry. 2000 Jul 4;39(26):7772-80. PMID:10869182<ref>PMID:10869182</ref>

	~~===BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEXAOSE===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
	~~{{ABSTRACT_PUBMED_10869182}}~~

	~~==About this Structure==~~
	~~[[1eo7]] is~~ a ~~1 chain structure with sequence from [http://en.wikipedia~~.~~org/wiki/Bacillus_circulans Bacillus circulans]~~. ~~Full crystallographic information is available from [http://oca~~.~~weizmann.ac.il/oca-bin~~/~~ocashort?id=1EO7 OCA].~~

	==See Also==		==See Also==
	*[[Glycosyltransferase\|Glycosyltransferase]]		*[[Glycosyltransferase\|Glycosyltransferase]]
			== References ==
	==~~Reference~~==		<references/>
	<~~ref group="xtra">PMID:010869182<~~/~~ref~~><~~references group="xtra"~~/>		__TOC__
			</StructureSection>
	[[Category: Bacillus circulans]]		[[Category: Bacillus circulans]]
	[[Category: Cyclomaltodextrin glucanotransferase]]		[[Category: Cyclomaltodextrin glucanotransferase]]

OCA at 16:47, 20 October 2012

2012-10-20T16:47:12Z

← Older revision		Revision as of 16:47, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
	[[1eo7]] is a 1 chain structure ~~of [[Glycosyltransferase]]~~ with sequence from [http://en.wikipedia.org/wiki/Bacillus_circulans Bacillus circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA].		[[1eo7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_circulans Bacillus circulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EO7 OCA].

	==See Also==		==See Also==