1jdl - Revision history

OCA at 06:16, 13 August 2026

2026-08-13T06:16:46Z

← Older revision		Revision as of 06:16, 13 August 2026
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jd/1jdl_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jd/1jdl_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>

OCA at 08:39, 16 August 2023

2023-08-16T08:39:20Z

← Older revision		Revision as of 08:39, 16 August 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JDL FirstGlance]. <br>		<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JDL FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7Å</td></tr>
			<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [https://pdbe.org/1jdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [https://www.ebi.ac.uk/pdbsum/1jdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jdl ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [https://pdbe.org/1jdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [https://www.ebi.ac.uk/pdbsum/1jdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jdl ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/CYC22_RHOCE CYC22_RHOCE]] Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria.		[https://www.uniprot.org/uniprot/CYC22_RHOCE CYC22_RHOCE] Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Rhodospirillum centenum]]		[[Category: Rhodospirillum centenum]]
	[[Category: Allen~~, J P~~]]		[[Category: Allen JP]]
	[[Category: Camara-Artigas, A]]		[[Category: Camara-Artigas A]]
	[[Category: Williams~~, J C]]~~		[[Category: Williams JC]]
	~~[[Category: Alpha helix]]~~
	~~[[Category: Electron transport~~]]

OCA at 13:14, 13 October 2021

2021-10-13T13:14:39Z

← Older revision		Revision as of 13:14, 13 October 2021
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	<StructureSection load='1jdl' size='340' side='right'caption='[[1jdl]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='1jdl' size='340' side='right'caption='[[1jdl]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1JDL FirstGlance]. <br>		<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JDL FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [~~http~~://pdbe.org/1jdl PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1jdl PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1jdl ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [https://pdbe.org/1jdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [https://www.ebi.ac.uk/pdbsum/1jdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jdl ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/CYC22_RHOCE CYC22_RHOCE]] Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria.		[[https://www.uniprot.org/uniprot/CYC22_RHOCE CYC22_RHOCE]] Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 10:45, 8 January 2020

2020-01-08T10:45:53Z

← Older revision		Revision as of 10:45, 8 January 2020
Line 1:		Line 1:

	==Structure of cytochrome c2 from Rhodospirillum Centenum==		==Structure of cytochrome c2 from Rhodospirillum Centenum==
	<StructureSection load='1jdl' size='340' side='right' caption='[[1jdl]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='1jdl' size='340' side='right'caption='[[1jdl]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>		<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>
Line 30:		Line 30:

	==See Also==		==See Also==
	*[[Cytochrome c\|Cytochrome c]]		*[[Cytochrome C 3D structures\|Cytochrome C 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Large Structures]]
	[[Category: Rhodospirillum centenum]]		[[Category: Rhodospirillum centenum]]
	[[Category: Allen, J P]]		[[Category: Allen, J P]]

OCA at 06:15, 4 April 2018

2018-04-04T06:15:07Z

← Older revision		Revision as of 06:15, 4 April 2018
Line 28:		Line 28:
	</div>		</div>
	<div class="pdbe-citations 1jdl" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1jdl" style="background-color:#fffaf0;"></div>

			==See Also==
			*[[Cytochrome c\|Cytochrome c]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 09:17, 17 January 2018

2018-01-17T09:17:14Z

← Older revision		Revision as of 09:17, 17 January 2018
Line 1:		Line 1:

	==Structure of cytochrome c2 from Rhodospirillum Centenum==		==Structure of cytochrome c2 from Rhodospirillum Centenum==
	<StructureSection load='1jdl' size='340' side='right' caption='[[1jdl]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='1jdl' size='340' side='right' caption='[[1jdl]], [[Resolution\|resolution]] 1.70Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>		<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [http://pdbe.org/1jdl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [http://www.ebi.ac.uk/pdbsum/1jdl PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [http://pdbe.org/1jdl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [http://www.ebi.ac.uk/pdbsum/1jdl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1jdl ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jd/1jdl_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jd/1jdl_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 27:		Line 28:
	</div>		</div>
	<div class="pdbe-citations 1jdl" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1jdl" style="background-color:#fffaf0;"></div>

	~~==See Also==~~
	*[[Cytochrome c\|Cytochrome c]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:05, 10 February 2016

2016-02-10T07:05:29Z

← Older revision		Revision as of 07:05, 10 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jdl ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 06:31, 11 September 2015

2015-09-11T06:31:50Z

← Older revision		Revision as of 06:31, 11 September 2015
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>		<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [http://www.ebi.ac.uk/pdbsum/1jdl PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [http://pdbe.org/1jdl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [http://www.ebi.ac.uk/pdbsum/1jdl PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 1jdl" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 12:37, 25 December 2014

2014-12-25T12:37:37Z

← Older revision		Revision as of 12:37, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>		<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [http://www.ebi.ac.uk/pdbsum/1jdl PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [http://www.ebi.ac.uk/pdbsum/1jdl PDBsum]</span></td></tr>
	<table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/CYC22_RHOCE CYC22_RHOCE]] Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: Rhodospirillum centenum]]		[[Category: Rhodospirillum centenum]]
	[[Category: Allen, J P.]]		[[Category: Allen, J P]]
	[[Category: Camara-Artigas, A.]]		[[Category: Camara-Artigas, A]]
	[[Category: Williams, J C.]]		[[Category: Williams, J C]]
	[[Category: Alpha helix]]		[[Category: Alpha helix]]
	[[Category: Electron transport]]		[[Category: Electron transport]]

OCA at 10:38, 28 September 2014

2014-09-28T10:38:47Z

← Older revision		Revision as of 10:38, 28 September 2014
Line 1:		Line 1:
	[[Image:~~1jdl~~.~~png~~\|~~left~~\|~~200px~~]]		==Structure of cytochrome c2 from Rhodospirillum Centenum==
			<StructureSection load='1jdl' size='340' side='right' caption='[[1jdl]], [[Resolution\|resolution]] 1.70Å' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[1jdl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JDL FirstGlance]. <br>
			</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jdl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1jdl RCSB], [http://www.ebi.ac.uk/pdbsum/1jdl PDBsum]</span></td></tr>
			<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jd/1jdl_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Cytochrome c(2) from the purple photosynthetic bacterium Rhodospirillum centenum has been crystallized by the sitting-drop vapour-diffusion method. The crystals belong to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 29.7, b = 59.9, c = 65.4 A, and diffract to a resolution limit of 1.7 A. The Fe-atom position was determined from its anomalous scattering contribution and a molecular-replacement solution was calculated. The correctness of the solution was confirmed by parallel isomorphous replacement studies. The resulting model has a type I cytochrome fold with two features, an extended alpha-helix and a surface-charge distribution, that are distinctive to this protein. The implications of these structural features for the ability of the cytochrome to serve as an electron carrier are discussed.

	~~{{STRUCTURE_1jdl\| PDB=1jdl \| SCENE= }}~~		Structure of cytochrome c2 from Rhodospirillum centenum.,Camara-Artigas A, Williams JC, Allen JP Acta Crystallogr D Biol Crystallogr. 2001 Nov;57(Pt 11):1498-505. Epub, 2001 Oct 25. PMID:11679712<ref>PMID:11679712</ref>

	~~===Structure~~ of ~~cytochrome c2 from Rhodospirillum Centenum===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
	~~{{ABSTRACT_PUBMED_11679712}}~~

	~~==About this Structure==~~
	~~[[1jdl]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Rhodospirillum_centenum Rhodospirillum centenum]~~. ~~Full crystallographic information is available from [http://oca.weizmann.ac.il~~/~~oca-bin/ocashort?id=1JDL OCA].~~

	==See Also==		==See Also==
	*[[Cytochrome c\|Cytochrome c]]		*[[Cytochrome c\|Cytochrome c]]
			== References ==
	==~~Reference~~==		<references/>
	<~~ref group="xtra">PMID:011679712<~~/~~ref~~><~~references group="xtra"~~/>		__TOC__
			</StructureSection>
	[[Category: Rhodospirillum centenum]]		[[Category: Rhodospirillum centenum]]
	[[Category: Allen, J P.]]		[[Category: Allen, J P.]]