1tkf - Revision history

OCA at 07:28, 30 October 2024

2024-10-30T07:28:29Z

← Older revision		Revision as of 07:28, 30 October 2024
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tkf_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tkf_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>

OCA at 08:41, 1 May 2024

2024-05-01T08:41:52Z

← Older revision		Revision as of 08:41, 1 May 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TKF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TKF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene~~></td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.2Å</td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</div></td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [https://pdbe.org/1tkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [https://www.ebi.ac.uk/pdbsum/1tkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tkf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [https://pdbe.org/1tkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [https://www.ebi.ac.uk/pdbsum/1tkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tkf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/~~APX_STRGR APX_STRGR~~]~~] Specific~~ for larger hydrophobic acids, especially leucine~~. No~~ cleavage occurs if the next residue is proline.		[https://www.uniprot.org/uniprot/APX_STRGG APX_STRGG] An exopeptidase specific for larger hydrophobic amino acids (especially leucine), no cleavage occurs if the next residue is proline (PubMed:8444149).<ref>PMID:2503378</ref> <ref>PMID:8444149</ref> <ref>PMID:8665903</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	*[[Aminopeptidase 3D structures\|Aminopeptidase 3D structures]]		*[[Aminopeptidase 3D structures\|Aminopeptidase 3D structures]]
	*[[Streptomyces griseus Aminopeptidase (SGAP)\|Streptomyces griseus Aminopeptidase (SGAP)]]		*[[Streptomyces griseus Aminopeptidase (SGAP)\|Streptomyces griseus Aminopeptidase (SGAP)]]
			== References ==
			<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Streptomyces griseus]]		[[Category: Streptomyces griseus]]
	[[Category: Blumberg, S]]		[[Category: Blumberg S]]
	[[Category: Gilboa, R]]		[[Category: Gilboa R]]
	[[Category: Reiland, V]]		[[Category: Reiland V]]
	[[Category: Schomburg, D]]		[[Category: Schomburg D]]
	[[Category: Shoham, G]]		[[Category: Shoham G]]
	[[Category: Shoham, Y]]		[[Category: Shoham Y]]
	[[Category: Spungin-Bialik, A]]		[[Category: Spungin-Bialik A]]
	~~[[Category: Calcium activation]]~~
	~~[[Category: Double-zinc metalloproteinase]]~~
	~~[[Category: Hydrolase]]~~
	~~[[Category: Protein-inhibitor complex~~]]

OCA at 09:29, 29 September 2021

2021-09-29T09:29:02Z

← Older revision		Revision as of 09:29, 29 September 2021
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	<StructureSection load='1tkf' size='340' side='right'caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='1tkf' size='340' side='right'caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1TKF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TKF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</div></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [~~http~~://pdbe.org/1tkf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1tkf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1tkf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [https://pdbe.org/1tkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [https://www.ebi.ac.uk/pdbsum/1tkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tkf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/APX_STRGR APX_STRGR]] Specific for larger hydrophobic acids, especially leucine. No cleavage occurs if the next residue is proline.		[[https://www.uniprot.org/uniprot/APX_STRGR APX_STRGR]] Specific for larger hydrophobic acids, especially leucine. No cleavage occurs if the next residue is proline.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 14:15, 25 December 2019

2019-12-25T14:15:34Z

← Older revision		Revision as of 14:15, 25 December 2019
Line 1:		Line 1:

	==Streptomyces griseus aminopeptidase complexed with D-tryptophan==		==Streptomyces griseus aminopeptidase complexed with D-tryptophan==
	<StructureSection load='1tkf' size='340' side='right' caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='1tkf' size='340' side='right'caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>
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	==See Also==		==See Also==
	*[[Aminopeptidase\|Aminopeptidase]]		*[[Aminopeptidase 3D structures\|Aminopeptidase 3D structures]]
	*[[Streptomyces griseus Aminopeptidase (SGAP)\|Streptomyces griseus Aminopeptidase (SGAP)]]		*[[Streptomyces griseus Aminopeptidase (SGAP)\|Streptomyces griseus Aminopeptidase (SGAP)]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Large Structures]]
	[[Category: Streptomyces griseus]]		[[Category: Streptomyces griseus]]
	[[Category: Blumberg, S]]		[[Category: Blumberg, S]]

OCA at 09:03, 21 March 2018

2018-03-21T09:03:30Z

← Older revision		Revision as of 09:03, 21 March 2018
Line 1:		Line 1:

	==Streptomyces griseus aminopeptidase complexed with D-tryptophan==		==Streptomyces griseus aminopeptidase complexed with D-tryptophan==
	<StructureSection load='1tkf' size='340' side='right' caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='1tkf' size='340' side='right' caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~"actinomyces_griseus"_krainsky_1914 "actinomyces~~ griseus~~" krainsky 1914~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [http://pdbe.org/1tkf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [http://www.ebi.ac.uk/pdbsum/1tkf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [http://pdbe.org/1tkf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [http://www.ebi.ac.uk/pdbsum/1tkf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1tkf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tkf_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tkf_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 25:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Actinomyces~~ griseus ~~krainsky 1914~~]]		[[Category: Streptomyces griseus]]
	[[Category: Blumberg, S]]		[[Category: Blumberg, S]]
	[[Category: Gilboa, R]]		[[Category: Gilboa, R]]

OCA at 06:58, 9 February 2016

2016-02-09T06:58:46Z

← Older revision		Revision as of 06:58, 9 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tkf ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 19:44, 10 September 2015

2015-09-10T19:44:49Z

← Older revision		Revision as of 19:44, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1tkf' size='340' side='right' caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='1tkf' size='340' side='right' caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Streptomyces_griseus Streptomyces~~ griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"actinomyces_griseus"_krainsky_1914 "actinomyces griseus" krainsky 1914]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [http://www.ebi.ac.uk/pdbsum/1tkf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [http://pdbe.org/1tkf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [http://www.ebi.ac.uk/pdbsum/1tkf PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Streptomyces~~ griseus]]		[[Category: Actinomyces griseus krainsky 1914]]
	[[Category: Blumberg, S]]		[[Category: Blumberg, S]]
	[[Category: Gilboa, R]]		[[Category: Gilboa, R]]

OCA at 05:12, 25 December 2014

2014-12-25T05:12:20Z

← Older revision		Revision as of 05:12, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [http://www.ebi.ac.uk/pdbsum/1tkf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [http://www.ebi.ac.uk/pdbsum/1tkf PDBsum]</span></td></tr>
	<table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/APX_STRGR APX_STRGR]] Specific for larger hydrophobic acids, especially leucine. No cleavage occurs if the next residue is proline.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Streptomyces griseus]]		[[Category: Streptomyces griseus]]
	[[Category: Blumberg, S.]]		[[Category: Blumberg, S]]
	[[Category: Gilboa, R.]]		[[Category: Gilboa, R]]
	[[Category: Reiland, V.]]		[[Category: Reiland, V]]
	[[Category: Schomburg, D.]]		[[Category: Schomburg, D]]
	[[Category: Shoham, G.]]		[[Category: Shoham, G]]
	[[Category: Shoham, Y.]]		[[Category: Shoham, Y]]
	[[Category: Spungin-Bialik, A.]]		[[Category: Spungin-Bialik, A]]
	[[Category: Calcium activation]]		[[Category: Calcium activation]]
	[[Category: Double-zinc metalloproteinase]]		[[Category: Double-zinc metalloproteinase]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Protein-inhibitor complex]]		[[Category: Protein-inhibitor complex]]

OCA at 22:37, 28 September 2014

2014-09-28T22:37:19Z

← Older revision		Revision as of 22:37, 28 September 2014
Line 1:		Line 1:
	~~[[Image:1tkf.png\|left\|200px]]~~		==Streptomyces griseus aminopeptidase complexed with D-tryptophan==
			<StructureSection load='1tkf' size='340' side='right' caption='[[1tkf]], [[Resolution\|resolution]] 1.20Å' scene=''>
	~~{{STRUCTURE_1tkf\| PDB=1tkf \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKF FirstGlance]. <br>
	===Streptomyces griseus aminopeptidase complexed with D-tryptophan===		</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DTR:D-TRYPTOPHAN'>DTR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
			<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1xjo\|1xjo]], [[1cp7\|1cp7]], [[1qq9\|1qq9]], [[1f2p\|1f2p]], [[1f2o\|1f2o]], [[1tf8\|1tf8]], [[1tf9\|1tf9]], [[1tkh\|1tkh]], [[1tkj\|1tkj]]</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tkf RCSB], [http://www.ebi.ac.uk/pdbsum/1tkf PDBsum]</span></td></tr>
	==~~About this Structure~~==		<table>
	[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA].		== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tk/1tkf_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Aminopeptidase\|Aminopeptidase]]		*[[Aminopeptidase\|Aminopeptidase]]
	*[[Streptomyces griseus Aminopeptidase (SGAP)\|Streptomyces griseus Aminopeptidase (SGAP)]]		*[[Streptomyces griseus Aminopeptidase (SGAP)\|Streptomyces griseus Aminopeptidase (SGAP)]]
			__TOC__
			</StructureSection>
	[[Category: Streptomyces griseus]]		[[Category: Streptomyces griseus]]
	[[Category: Blumberg, S.]]		[[Category: Blumberg, S.]]

OCA at 13:02, 20 October 2012

2012-10-20T13:02:33Z

← Older revision		Revision as of 13:02, 20 October 2012
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
	[[1tkf]] is a 1 chain structure ~~of [[Aminopeptidase]] and [[Streptomyces griseus Aminopeptidase (SGAP)]]~~ with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA].		[[1tkf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKF OCA].

	==See Also==		==See Also==