1vb2 - Revision history

OCA at 07:29, 9 October 2024

2024-10-09T07:29:07Z

← Older revision		Revision as of 07:29, 9 October 2024
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vb2_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vb2_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>

OCA at 00:00, 28 December 2023

2023-12-28T00:00:52Z

← Older revision		Revision as of 00:00, 28 December 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>
	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~<div style='overflow: auto; max~~-~~height: 3em;'>[[1smv\|1smv]]~~, [[~~1vb4~~\|~~1vb4~~]]~~</div>~~</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.4Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [https://pdbe.org/1vb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [https://www.ebi.ac.uk/pdbsum/1vb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vb2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [https://pdbe.org/1vb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [https://www.ebi.ac.uk/pdbsum/1vb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vb2 ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/Q9EB06_9VIRU Q9EB06_9VIRU]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Sesbania mosaic virus]]		[[Category: Sesbania mosaic virus]]
	[[Category: Lokesh~~, G L~~]]		[[Category: Lokesh GL]]
	[[Category: Murthy~~, M R~~]]		[[Category: Murthy MR]]
	[[Category: Sangita, V]]		[[Category: Sangita V]]
	[[Category: Saravanan, V]]		[[Category: Saravanan V]]
	[[Category: Satheshkumar~~, P S~~]]		[[Category: Satheshkumar PS]]
	[[Category: Savithri~~, H S~~]]		[[Category: Savithri HS]]
	[[Category: Vijay~~, C S]]~~		[[Category: Vijay CS]]
	~~[[Category: Calcium mutant]]~~
	~~[[Category: Icosahedral virus]]~~
	~~[[Category: T=1 capsid]]~~
	~~[[Category: Virus~~]]

OCA at 13:19, 13 October 2021

2021-10-13T13:19:10Z

← Older revision		Revision as of 13:19, 13 October 2021
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	<StructureSection load='1vb2' size='340' side='right'caption='[[1vb2]], [[Resolution\|resolution]] 3.40Å' scene=''>		<StructureSection load='1vb2' size='340' side='right'caption='[[1vb2]], [[Resolution\|resolution]] 3.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1smv\|1smv]], [[1vb4\|1vb4]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1smv\|1smv]], [[1vb4\|1vb4]]</div></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [~~http~~://pdbe.org/1vb2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1vb2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1vb2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [https://pdbe.org/1vb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [https://www.ebi.ac.uk/pdbsum/1vb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vb2 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</div>		</div>
	<div class="pdbe-citations 1vb2" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1vb2" style="background-color:#fffaf0;"></div>

			==See Also==
			*[[Virus coat proteins 3D structures\|Virus coat proteins 3D structures]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 10:08, 8 January 2020

2020-01-08T10:08:20Z

← Older revision		Revision as of 10:08, 8 January 2020
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	==T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N==		==T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N==
	<StructureSection load='1vb2' size='340' side='right' caption='[[1vb2]], [[Resolution\|resolution]] 3.40Å' scene=''>		<StructureSection load='1vb2' size='340' side='right'caption='[[1vb2]], [[Resolution\|resolution]] 3.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Large Structures]]
	[[Category: Sesbania mosaic virus]]		[[Category: Sesbania mosaic virus]]
	[[Category: Lokesh, G L]]		[[Category: Lokesh, G L]]

OCA at 07:14, 4 April 2018

2018-04-04T07:14:58Z

← Older revision		Revision as of 07:14, 4 April 2018
Line 1:		Line 1:

	==T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N==		==T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N==
	<StructureSection load='1vb2' size='340' side='right' caption='[[1vb2]], [[Resolution\|resolution]] 3.40Å' scene=''>		<StructureSection load='1vb2' size='340' side='right' caption='[[1vb2]], [[Resolution\|resolution]] 3.40Å' scene=''>
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	<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1smv\|1smv]], [[1vb4\|1vb4]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1smv\|1smv]], [[1vb4\|1vb4]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [http://pdbe.org/1vb2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [http://www.ebi.ac.uk/pdbsum/1vb2 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [http://pdbe.org/1vb2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [http://www.ebi.ac.uk/pdbsum/1vb2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vb2 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vb2_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vb2_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 02:15, 9 February 2016

2016-02-09T02:15:38Z

← Older revision		Revision as of 02:15, 9 February 2016
Line 14:		Line 14:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vb2 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 17:37, 10 September 2015

2015-09-10T17:37:36Z

← Older revision		Revision as of 17:37, 10 September 2015
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	<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1smv\|1smv]], [[1vb4\|1vb4]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1smv\|1smv]], [[1vb4\|1vb4]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [http://www.ebi.ac.uk/pdbsum/1vb2 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [http://pdbe.org/1vb2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [http://www.ebi.ac.uk/pdbsum/1vb2 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 1vb2" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 12:21, 6 January 2015

2015-01-06T12:21:10Z

← Older revision		Revision as of 12:21, 6 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1smv\|1smv]], [[1vb4\|1vb4]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1smv\|1smv]], [[1vb4\|1vb4]]</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [http://www.ebi.ac.uk/pdbsum/1vb2 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [http://www.ebi.ac.uk/pdbsum/1vb2 PDBsum]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Sesbania mosaic virus]]		[[Category: Sesbania mosaic virus]]
	[[Category: Lokesh, G L.]]		[[Category: Lokesh, G L]]
	[[Category: Murthy, M R.]]		[[Category: Murthy, M R]]
	[[Category: Sangita, V.]]		[[Category: Sangita, V]]
	[[Category: Saravanan, V.]]		[[Category: Saravanan, V]]
	[[Category: Satheshkumar, P S.]]		[[Category: Satheshkumar, P S]]
	[[Category: Savithri, H S.]]		[[Category: Savithri, H S]]
	[[Category: Vijay, C S.]]		[[Category: Vijay, C S]]
	[[Category: Calcium mutant]]		[[Category: Calcium mutant]]
	[[Category: Icosahedral virus]]		[[Category: Icosahedral virus]]
	[[Category: T=1 capsid]]		[[Category: T=1 capsid]]
	[[Category: Virus]]		[[Category: Virus]]

OCA at 19:23, 29 September 2014

2014-09-29T19:23:57Z

← Older revision		Revision as of 19:23, 29 September 2014
Line 1:		Line 1:
	[[Image:~~1vb2~~.~~png~~\|~~left~~\|~~200px~~]]		==T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N==
			<StructureSection load='1vb2' size='340' side='right' caption='[[1vb2]], [[Resolution\|resolution]] 3.40Å' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[1vb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VB2 FirstGlance]. <br>
			</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1smv\|1smv]], [[1vb4\|1vb4]]</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vb2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vb2 RCSB], [http://www.ebi.ac.uk/pdbsum/1vb2 PDBsum]</span></td></tr>
			<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vb2_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Sesbania mosaic virus particles consist of 180 coat protein subunits of 29kDa organized on a T=3 icosahedral lattice. N-terminal deletion mutants of coat protein that lack 36 (CP-NDelta36) and 65 (CP-NDelta65) residues from the N terminus, when expressed in Escherichia coli, produced similar T=1 capsids of approximate diameter 20nm. In contrast to the wild-type particles, these contain only 60 copies of the truncated protein subunits (T=1). CP-NDelta65 lacks the "beta-annulus" believed to be responsible for the error-free assembly of T=3 particles. Though the CP-NDelta36 mutant has the beta-annulus segment, it does not form a T=3 capsid, presumably because it lacks an arginine-rich motif found close to the amino terminus. Both CP-NDelta36 and CP-NDelta65 T=1 capsids retain many key features of the T=3 quaternary structure. Calcium binding geometries at the coat protein interfaces in these two particles are also nearly identical. When the conserved aspartate residues that coordinate the calcium, D146 and D149 in the CP-NDelta65, were mutated to asparagine (CP-NDelta65-D146N-D149N), the subunits assembled into T=1 particles but failed to bind calcium ions. The structure of this mutant revealed particles that were slightly expanded. The analysis of the structures of these mutant capsids suggests that although calcium binding contributes substantially to the stability of T=1 particles, it is not mandatory for their assembly. In contrast, the presence of a large fraction of the amino-terminal arm including sequences that precede the beta-annulus and the conserved D149 appear to be indispensable for the error-free assembly of T=3 particles.

	~~{{STRUCTURE_1vb2\| PDB~~=~~1vb2 \| SCENE~~= }}		T=1 capsid structures of Sesbania mosaic virus coat protein mutants: determinants of T=3 and T=1 capsid assembly.,Sangita V, Lokesh GL, Satheshkumar PS, Vijay CS, Saravanan V, Savithri HS, Murthy MR J Mol Biol. 2004 Sep 17;342(3):987-99. PMID:15342251<ref>PMID:15342251</ref>

	~~===T=1 capsid structure~~ of ~~Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
	~~{{ABSTRACT_PUBMED_15342251}}~~		== References ==
			<references/>
	~~==About this Structure==~~		__TOC__
	~~[[1vb2]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Sesbania_mosaic_virus Sesbania mosaic virus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1VB2 OCA].~~		</StructureSection>

	==~~Reference~~==
	<~~ref group="xtra">PMID:015342251<~~/~~ref~~><~~references group="xtra"~~/>
	[[Category: Sesbania mosaic virus]]		[[Category: Sesbania mosaic virus]]
	[[Category: Lokesh, G L.]]		[[Category: Lokesh, G L.]]

OCA: Protected "1vb2" [edit=sysop:move=sysop]

2013-01-05T12:25:59Z

Protected "1vb2" [edit=sysop:move=sysop]

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