2bb8 - Revision history

OCA at 09:24, 22 May 2024

2024-05-22T09:24:22Z

← Older revision		Revision as of 09:24, 22 May 2024
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	==N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE==		==N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE==
	<StructureSection load='2bb8' size='340' side='right'caption='[[2bb8~~]], [[NMR_Ensembles_of_Models \| 1 NMR models~~]]' scene=''>		<StructureSection load='2bb8' size='340' side='right'caption='[[2bb8]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>
	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style~~=~~'overflow: auto; max-height: 3em;'>[[1bb8\|1bb8]]</div~~></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [https://pdbe.org/2bb8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [https://www.ebi.ac.uk/pdbsum/2bb8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bb8 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [https://pdbe.org/2bb8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [https://www.ebi.ac.uk/pdbsum/2bb8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bb8 ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/TNR6_ENTFL TNR6_ENTFL]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Enterococcus ~~proteiformis thiercelin and jouhaud 1903~~]]		[[Category: Enterococcus faecalis]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Clubb~~, R T~~]]		[[Category: Clubb RT]]
	[[Category: Connolly~~, K M~~]]		[[Category: Connolly KM]]
	[[Category: Wojciak~~, J M]]~~		[[Category: Wojciak JM]]
	~~[[Category: Dna binding]]~~
	~~[[Category: Dna recombination]]~~
	~~[[Category: Integrase]]~~
	~~[[Category: Transposase]]~~
	~~[[Category: Transposition~~]]

OCA at 13:07, 24 November 2021

2021-11-24T13:07:22Z

← Older revision		Revision as of 13:07, 24 November 2021
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	<StructureSection load='2bb8' size='340' side='right'caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>		<StructureSection load='2bb8' size='340' side='right'caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1bb8\|1bb8]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1bb8\|1bb8]]</div></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [~~http~~://pdbe.org/2bb8 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2bb8 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2bb8 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [https://pdbe.org/2bb8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [https://www.ebi.ac.uk/pdbsum/2bb8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bb8 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 08:12, 19 February 2020

2020-02-19T08:12:58Z

← Older revision		Revision as of 08:12, 19 February 2020
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	==N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE==		==N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE==
	<StructureSection load='2bb8' size='340' side='right' caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>		<StructureSection load='2bb8' size='340' side='right'caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>
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	==See Also==		==See Also==
	*[[Retroviral ~~Integrase~~\|Retroviral ~~Integrase~~]]		*[[Retroviral integrase 3D structures\|Retroviral integrase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
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	</StructureSection>		</StructureSection>
	[[Category: Enterococcus proteiformis thiercelin and jouhaud 1903]]		[[Category: Enterococcus proteiformis thiercelin and jouhaud 1903]]
			[[Category: Large Structures]]
	[[Category: Clubb, R T]]		[[Category: Clubb, R T]]
	[[Category: Connolly, K M]]		[[Category: Connolly, K M]]

OCA at 06:41, 16 May 2018

2018-05-16T06:41:40Z

← Older revision		Revision as of 06:41, 16 May 2018
Line 1:		Line 1:

	==N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE==		==N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE==
	<StructureSection load='2bb8' size='340' side='right' caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>		<StructureSection load='2bb8' size='340' side='right' caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
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	<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1bb8\|1bb8]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1bb8\|1bb8]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [http://pdbe.org/2bb8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [http://www.ebi.ac.uk/pdbsum/2bb8 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [http://pdbe.org/2bb8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [http://www.ebi.ac.uk/pdbsum/2bb8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2bb8 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bb/2bb8_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bb/2bb8_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bb8 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 22:25, 11 September 2015

2015-09-11T22:25:05Z

← Older revision		Revision as of 22:25, 11 September 2015
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	<StructureSection load='2bb8' size='340' side='right' caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>		<StructureSection load='2bb8' size='340' side='right' caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Enterococcus_faecalis Enterococcus faecalis~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"enterococcus_proteiformis"_thiercelin_and_jouhaud_1903 "enterococcus proteiformis" thiercelin and jouhaud 1903]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1bb8\|1bb8]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1bb8\|1bb8]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [http://www.ebi.ac.uk/pdbsum/2bb8 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [http://pdbe.org/2bb8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [http://www.ebi.ac.uk/pdbsum/2bb8 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 2bb8" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Enterococcus ~~faecalis~~]]		[[Category: Enterococcus proteiformis thiercelin and jouhaud 1903]]
	[[Category: Clubb, R T]]		[[Category: Clubb, R T]]
	[[Category: Connolly, K M]]		[[Category: Connolly, K M]]

OCA at 09:34, 8 January 2015

2015-01-08T09:34:08Z

← Older revision		Revision as of 09:34, 8 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1bb8\|1bb8]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1bb8\|1bb8]]</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [http://www.ebi.ac.uk/pdbsum/2bb8 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [http://www.ebi.ac.uk/pdbsum/2bb8 PDBsum]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Enterococcus faecalis]]		[[Category: Enterococcus faecalis]]
	[[Category: Clubb, R T.]]		[[Category: Clubb, R T]]
	[[Category: Connolly, K M.]]		[[Category: Connolly, K M]]
	[[Category: Wojciak, J M.]]		[[Category: Wojciak, J M]]
	[[Category: Dna binding]]		[[Category: Dna binding]]
	[[Category: Dna recombination]]		[[Category: Dna recombination]]

OCA at 03:38, 29 September 2014

2014-09-29T03:38:18Z

← Older revision		Revision as of 03:38, 29 September 2014
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	[[Image:~~2bb8~~.~~png~~\|~~left~~\|~~200px~~]]		==N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE==
			<StructureSection load='2bb8' size='340' side='right' caption='[[2bb8]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BB8 FirstGlance]. <br>
			</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1bb8\|1bb8]]</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bb8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bb8 RCSB], [http://www.ebi.ac.uk/pdbsum/2bb8 PDBsum]</span></td></tr>
			<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bb/2bb8_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			The integrase family of site-specific recombinases catalyze a diverse array of DNA rearrangements in archaebacteria, eubacteria and yeast. The solution structure of the DNA binding domain of the integrase protein from the conjugative transposon Tn916 has been determined using NMR spectroscopy. The structure provides the first insights into distal site DNA binding by a site-specific integrase and reveals that the N-terminal domain is structurally similar to the double stranded RNA binding domain (dsRBD). The results of chemical shift mapping experiments suggest that the integrase protein interacts with DNA using residues located on the face of its three stranded beta-sheet. This surface differs from the proposed RNA binding surface in dsRBDs, suggesting that different surfaces on the same protein fold can be used to bind DNA and RNA.

	~~{{STRUCTURE_2bb8\| PDB=2bb8 \| SCENE= }}~~		Site-specific DNA binding using a variation of the double stranded RNA binding motif.,Connolly KM, Wojciak JM, Clubb RT Nat Struct Biol. 1998 Jul;5(7):546-50. PMID:9665166<ref>PMID:9665166</ref>

	~~===N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE~~, ~~NMR, MINIMIZED AVERAGE STRUCTURE===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
	~~{{ABSTRACT_PUBMED_9665166}}~~

	~~==About this Structure==~~
	~~[[2bb8]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Enterococcus_faecalis Enterococcus faecalis]~~. ~~Full experimental information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA].~~

	==See Also==		==See Also==
	*[[Retroviral Integrase\|Retroviral Integrase]]		*[[Retroviral Integrase\|Retroviral Integrase]]
			== References ==
	==~~Reference~~==		<references/>
	<~~ref group="xtra">PMID:009665166<~~/~~ref~~><~~references group="xtra"~~/>		__TOC__
			</StructureSection>
	[[Category: Enterococcus faecalis]]		[[Category: Enterococcus faecalis]]
	[[Category: Clubb, R T.]]		[[Category: Clubb, R T.]]

OCA at 21:00, 20 October 2012

2012-10-20T21:00:49Z

← Older revision		Revision as of 21:00, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
	[[2bb8]] is a 1 chain structure ~~of [[Retroviral Integrase]]~~ with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA].		[[2bb8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA].

	==See Also==		==See Also==

OCA: Protected "2bb8" [edit=sysop:move=sysop]

2012-07-27T12:18:40Z

Protected "2bb8" [edit=sysop:move=sysop]

← Older revision	Revision as of 12:18, 27 July 2012
(No difference)

OCA at 12:18, 27 July 2012

2012-07-27T12:18:38Z

← Older revision		Revision as of 12:18, 27 July 2012
Line 1:		Line 1:
	~~{{Seed}}~~
	[[Image:2bb8.png\|left\|200px]]		[[Image:2bb8.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2bb8", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2bb8\| PDB=2bb8 \| SCENE= }}		{{STRUCTURE_2bb8\| PDB=2bb8 \| SCENE= }}

	===N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE===		===N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE===


	~~<!--~~
	~~The line below this paragraph, {{ABSTRACT_PUBMED_9665166}}, adds the Publication Abstract to the page~~
	~~(as it appears on PubMed at http://www.pubmed.gov), where 9665166 is the PubMed ID number.~~
	~~-->~~
	{{ABSTRACT_PUBMED_9665166}}		{{ABSTRACT_PUBMED_9665166}}

	==About this Structure==		==About this Structure==
	~~2BB8~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA].		[[2bb8]] is a 1 chain structure of [[Retroviral Integrase]] with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BB8 OCA].

			==See Also==
			*[[Retroviral Integrase\|Retroviral Integrase]]

	==Reference==		==Reference==
	<ref group="xtra">PMID:~~9665166~~</ref><references group="xtra"/>		<ref group="xtra">PMID:009665166</ref><references group="xtra"/>
	[[Category: Enterococcus faecalis]]		[[Category: Enterococcus faecalis]]
	[[Category: Clubb, R T.]]		[[Category: Clubb, R T.]]
Line 33:		Line 24:
	[[Category: Transposase]]		[[Category: Transposase]]
	[[Category: Transposition]]		[[Category: Transposition]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:54:18 2009''~~