2bej - Revision history

OCA at 09:15, 9 May 2024

2024-05-09T09:15:05Z

← Older revision		Revision as of 09:15, 9 May 2024
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	<StructureSection load='2bej' size='340' side='right'caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2bej' size='340' side='right'caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Thet2 Thet2~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>
	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ADP:ADENOSINE~~-~~5-DIPHOSPHATE'>ADP</scene>~~, ~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height~~: ~~3em;~~'>~~[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]~~</~~div~~></td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [https://pdbe.org/2bej PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [https://www.ebi.ac.uk/pdbsum/2bej PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bej ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [https://pdbe.org/2bej PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [https://www.ebi.ac.uk/pdbsum/2bej PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bej ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/SOJ_THET2 SOJ_THET2]] ATPase probably involved in chromosome partitioning. Cooperatively binds dsDNA, forming nucleoprotein filaments in a strictly ATP-dependent fashion. Can also bind ssDNA with lower affinity.<ref>PMID:15635448</ref>		[https://www.uniprot.org/uniprot/SOJ_THET2 SOJ_THET2] ATPase probably involved in chromosome partitioning. Cooperatively binds dsDNA, forming nucleoprotein filaments in a strictly ATP-dependent fashion. Can also bind ssDNA with lower affinity.<ref>PMID:15635448</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: ~~Thet2~~]]		[[Category: Thermus thermophilus HB27]]
	[[Category: Butler~~, P J.G~~]]		[[Category: Butler PJG]]
	[[Category: Leonard~~, T A~~]]		[[Category: Leonard TA]]
	[[Category: Lowe, J]]		[[Category: Lowe J]]
	~~[[Category: Atpase]]~~
	~~[[Category: Bacterial]]~~
	~~[[Category: Chromosome segregation]]~~
	~~[[Category: Soj~~]]

OCA at 13:37, 13 October 2021

2021-10-13T13:37:29Z

← Older revision		Revision as of 13:37, 13 October 2021
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	<StructureSection load='2bej' size='340' side='right'caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2bej' size='340' side='right'caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</div></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [~~http~~://pdbe.org/2bej PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2bej PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2bej ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [https://pdbe.org/2bej PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [https://www.ebi.ac.uk/pdbsum/2bej PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bej ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/SOJ_THET2 SOJ_THET2]] ATPase probably involved in chromosome partitioning. Cooperatively binds dsDNA, forming nucleoprotein filaments in a strictly ATP-dependent fashion. Can also bind ssDNA with lower affinity.<ref>PMID:15635448</ref>		[[https://www.uniprot.org/uniprot/SOJ_THET2 SOJ_THET2]] ATPase probably involved in chromosome partitioning. Cooperatively binds dsDNA, forming nucleoprotein filaments in a strictly ATP-dependent fashion. Can also bind ssDNA with lower affinity.<ref>PMID:15635448</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 19:18, 11 December 2019

2019-12-11T19:18:41Z

← Older revision		Revision as of 19:18, 11 December 2019
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	==Structure of the bacterial chromosome segregation protein Soj==		==Structure of the bacterial chromosome segregation protein Soj==
	<StructureSection load='2bej' size='340' side='right' caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2bej' size='340' side='right'caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Large Structures]]
	[[Category: Thet2]]		[[Category: Thet2]]
	[[Category: Butler, P J.G]]		[[Category: Butler, P J.G]]

OCA at 18:44, 24 January 2018

2018-01-24T18:44:24Z

← Older revision		Revision as of 18:44, 24 January 2018
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	==~~STRUCTURE OF THE BACTERIAL CHROMOSOME SEGREGATION PROTEIN SOJ~~==
			==Structure of the bacterial chromosome segregation protein Soj==
	<StructureSection load='2bej' size='340' side='right' caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2bej' size='340' side='right' caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
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	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [http://pdbe.org/2bej PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [http://www.ebi.ac.uk/pdbsum/2bej PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [http://pdbe.org/2bej PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [http://www.ebi.ac.uk/pdbsum/2bej PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2bej ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/2bej_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/2bej_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 22:46, 7 February 2016

2016-02-07T22:46:04Z

← Older revision		Revision as of 22:46, 7 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bej ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 05:34, 10 September 2015

2015-09-10T05:34:27Z

← Older revision		Revision as of 05:34, 10 September 2015
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	<StructureSection load='2bej' size='340' side='right' caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2bej' size='340' side='right' caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermus_thermophilus Thermus thermophilus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [http://www.ebi.ac.uk/pdbsum/2bej PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [http://pdbe.org/2bej PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [http://www.ebi.ac.uk/pdbsum/2bej PDBsum]</span></td></tr>
	</table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/SOJ_THET2 SOJ_THET2]] ATPase probably involved in chromosome partitioning. Cooperatively binds dsDNA, forming nucleoprotein filaments in a strictly ATP-dependent fashion. Can also bind ssDNA with lower affinity.<ref>PMID:15635448</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 2bej" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Thermus thermophilus~~]]		[[Category: Thet2]]
	[[Category: Butler, P J.G]]		[[Category: Butler, P J.G]]
	[[Category: Leonard, T A]]		[[Category: Leonard, T A]]

OCA at 09:13, 8 January 2015

2015-01-08T09:13:49Z

← Older revision		Revision as of 09:13, 8 January 2015
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [http://www.ebi.ac.uk/pdbsum/2bej PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [http://www.ebi.ac.uk/pdbsum/2bej PDBsum]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Butler, P J.G.]]		[[Category: Butler, P J.G]]
	[[Category: Leonard, T A.]]		[[Category: Leonard, T A]]
	[[Category: Lowe, J.]]		[[Category: Lowe, J]]
	[[Category: Atpase]]		[[Category: Atpase]]
	[[Category: Bacterial]]		[[Category: Bacterial]]
	[[Category: Chromosome segregation]]		[[Category: Chromosome segregation]]
	[[Category: Soj]]		[[Category: Soj]]

OCA at 01:46, 30 September 2014

2014-09-30T01:46:09Z

← Older revision		Revision as of 01:46, 30 September 2014
Line 1:		Line 1:
	[[Image:~~2bej~~.~~png~~\|~~left~~\|~~200px~~]]		==STRUCTURE OF THE BACTERIAL CHROMOSOME SEGREGATION PROTEIN SOJ==
			<StructureSection load='2bej' size='340' side='right' caption='[[2bej]], [[Resolution\|resolution]] 2.10Å' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[2bej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BEJ FirstGlance]. <br>
			</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
			<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1vz0\|1vz0]], [[1wcv\|1wcv]], [[2bek\|2bek]]</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bej OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bej RCSB], [http://www.ebi.ac.uk/pdbsum/2bej PDBsum]</span></td></tr>
			<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/2bej_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Soj and Spo0J of the Gram-negative hyperthermophile Thermus thermophilus belong to the conserved ParAB family of bacterial proteins implicated in plasmid and chromosome partitioning. Spo0J binds to DNA near the replication origin and localises at the poles following initiation of replication. Soj oscillates in the nucleoid region in an ATP- and Spo0J-dependent fashion. Here, we show that Soj undergoes ATP-dependent dimerisation in solution and forms nucleoprotein filaments with DNA. Crystal structures of Soj in three nucleotide states demonstrate that the empty and ADP-bound states are monomeric, while a hydrolysis-deficient mutant, D44A, is capable of forming a nucleotide 'sandwich' dimer. Soj ATPase activity is stimulated by Spo0J or the N-terminal 20 amino-acid peptide of Spo0J. Our analysis shows that dimerisation and activation involving a peptide containing a Lys/Arg is conserved for Soj, ParA and MinD and their modulators Spo0J, ParB and MinE, respectively. By homology to the nitrogenase iron protein and the GTPases Ffh/FtsY, we suggest that Soj dimerisation and regulation represent a conserved biological switch.

	~~{{STRUCTURE_2bej\| PDB=2bej \| SCENE= }}~~		Bacterial chromosome segregation: structure and DNA binding of the Soj dimer--a conserved biological switch.,Leonard TA, Butler PJ, Lowe J EMBO J. 2005 Jan 26;24(2):270-82. Epub 2005 Jan 6. PMID:15635448<ref>PMID:15635448</ref>

	~~===STRUCTURE OF THE BACTERIAL CHROMOSOME SEGREGATION PROTEIN SOJ===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
	~~{{ABSTRACT_PUBMED_15635448}}~~		== References ==
			<references/>
	~~==About this Structure==~~		__TOC__
	~~[[2bej]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Thermus_thermophilus Thermus thermophilus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA].~~		</StructureSection>

	==~~Reference~~==
	<~~ref group="xtra">PMID:015635448<~~/~~ref~~><~~references group="xtra"~~/>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Butler, P J.G.]]		[[Category: Butler, P J.G.]]

OCA: Protected "2bej" [edit=sysop:move=sysop]

2013-01-06T11:00:38Z

Protected "2bej" [edit=sysop:move=sysop]

← Older revision	Revision as of 11:00, 6 January 2013
(No difference)

OCA at 11:00, 6 January 2013

2013-01-06T11:00:34Z

← Older revision		Revision as of 11:00, 6 January 2013
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	~~{{Seed}}~~
	[[Image:2bej.png\|left\|200px]]		[[Image:2bej.png\|left\|200px]]

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	{{STRUCTURE_2bej\| PDB=2bej \| SCENE= }}		{{STRUCTURE_2bej\| PDB=2bej \| SCENE= }}

	===STRUCTURE OF THE BACTERIAL CHROMOSOME SEGREGATION PROTEIN SOJ===		===STRUCTURE OF THE BACTERIAL CHROMOSOME SEGREGATION PROTEIN SOJ===


	~~<!--~~
	~~The line below this paragraph, {{ABSTRACT_PUBMED_15635448}}, adds the Publication Abstract to the page~~
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	{{ABSTRACT_PUBMED_15635448}}		{{ABSTRACT_PUBMED_15635448}}

	==About this Structure==		==About this Structure==
	~~2BEJ~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA].		[[2bej]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEJ OCA].

	==Reference==		==Reference==
	<ref group="xtra">PMID:~~15635448~~</ref><references group="xtra"/>		<ref group="xtra">PMID:015635448</ref><references group="xtra"/>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Butler, P J.G.]]		[[Category: Butler, P J.G.]]
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	[[Category: Chromosome segregation]]		[[Category: Chromosome segregation]]
	[[Category: Soj]]		[[Category: Soj]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 16:59:02 2009''~~