2cmp - Revision history

OCA at 09:28, 9 May 2024

2024-05-09T09:28:04Z

← Older revision		Revision as of 09:28, 9 May 2024
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	<StructureSection load='2cmp' size='340' side='right'caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>		<StructureSection load='2cmp' size='340' side='right'caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Bpsf6 Bpsf6~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CMP FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_phage_SF6 Bacillus phage SF6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CMP FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [https://pdbe.org/2cmp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [https://www.ebi.ac.uk/pdbsum/2cmp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cmp ProSAT]</span></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.58Å</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [https://pdbe.org/2cmp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [https://www.ebi.ac.uk/pdbsum/2cmp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cmp ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/TERS_BPSF6 TERS_BPSF6]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	==See Also==		==See Also==
	*[[Terminase\|Terminase]]		*[[Terminase 3D Structures\|Terminase 3D Structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Bpsf6~~]]		[[Category: Bacillus phage SF6]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Alonso~~, J C~~]]		[[Category: Alonso JC]]
	[[Category: Antson~~, A A~~]]		[[Category: Antson AA]]
	[[Category: Benini, S]]		[[Category: Benini S]]
	[[Category: Chechik, M]]		[[Category: Chechik M]]
	[[Category: DeLuchi, D]]		[[Category: DeLuchi D]]
	[[Category: Ortiz-Lombardia, M]]		[[Category: Ortiz-Lombardia M]]
	[[Category: Polier, S]]		[[Category: Polier S]]
	[[Category: Shevtsov~~, M B]]~~		[[Category: Shevtsov MB]]
	~~[[Category: Dna packaging]]~~
	~~[[Category: Sf6]]~~
	~~[[Category: Viral protein~~]]

OCA at 07:12, 24 February 2021

2021-02-24T07:12:28Z

← Older revision		Revision as of 07:12, 24 February 2021
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	<StructureSection load='2cmp' size='340' side='right'caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>		<StructureSection load='2cmp' size='340' side='right'caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bpsf6 Bpsf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2CMP FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpsf6 Bpsf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CMP FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [~~http~~://pdbe.org/2cmp PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2cmp PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2cmp ProSAT]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [https://pdbe.org/2cmp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [https://www.ebi.ac.uk/pdbsum/2cmp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cmp ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 12:00, 10 May 2019

2019-05-10T12:00:48Z

← Older revision		Revision as of 12:00, 10 May 2019
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	==crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6==		==crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6==
	<StructureSection load='2cmp' size='340' side='right' caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>		<StructureSection load='2cmp' size='340' side='right'caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpsf6 Bpsf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMP FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpsf6 Bpsf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMP FirstGlance]. <br>
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	</StructureSection>		</StructureSection>
	[[Category: Bpsf6]]		[[Category: Bpsf6]]
			[[Category: Large Structures]]
	[[Category: Alonso, J C]]		[[Category: Alonso, J C]]
	[[Category: Antson, A A]]		[[Category: Antson, A A]]

OCA at 08:47, 23 May 2018

2018-05-23T08:47:02Z

← Older revision		Revision as of 08:47, 23 May 2018
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	==crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6==		==crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6==
	<StructureSection load='2cmp' size='340' side='right' caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>		<StructureSection load='2cmp' size='340' side='right' caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpsf6 Bpsf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMP FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpsf6 Bpsf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMP FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [http://pdbe.org/2cmp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [http://www.ebi.ac.uk/pdbsum/2cmp PDBsum]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [http://pdbe.org/2cmp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [http://www.ebi.ac.uk/pdbsum/2cmp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2cmp ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/2cmp_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/2cmp_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cmp ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	</div>		</div>
	<div class="pdbe-citations 2cmp" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 2cmp" style="background-color:#fffaf0;"></div>

			==See Also==
			*[[Terminase\|Terminase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:20, 11 September 2015

2015-09-11T07:20:32Z

← Older revision		Revision as of 07:20, 11 September 2015
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	<StructureSection load='2cmp' size='340' side='right' caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>		<StructureSection load='2cmp' size='340' side='right' caption='[[2cmp]], [[Resolution\|resolution]] 1.58Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_phage_sf6 Bacillus phage sf6~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMP FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpsf6 Bpsf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMP FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [http://www.ebi.ac.uk/pdbsum/2cmp PDBsum]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [http://pdbe.org/2cmp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [http://www.ebi.ac.uk/pdbsum/2cmp PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 2cmp" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Bacillus phage sf6~~]]		[[Category: Bpsf6]]
	[[Category: Alonso, J C]]		[[Category: Alonso, J C]]
	[[Category: Antson, A A]]		[[Category: Antson, A A]]

OCA at 18:41, 15 January 2015

2015-01-15T18:41:31Z

← Older revision		Revision as of 18:41, 15 January 2015
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_phage_sf6 Bacillus phage sf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMP FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_phage_sf6 Bacillus phage sf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMP FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [http://www.ebi.ac.uk/pdbsum/2cmp PDBsum]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cmp RCSB], [http://www.ebi.ac.uk/pdbsum/2cmp PDBsum]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Bacillus phage sf6]]		[[Category: Bacillus phage sf6]]
	[[Category: Alonso, J C.]]		[[Category: Alonso, J C]]
	[[Category: Antson, A A.]]		[[Category: Antson, A A]]
	[[Category: Benini, S.]]		[[Category: Benini, S]]
	[[Category: Chechik, M.]]		[[Category: Chechik, M]]
	[[Category: DeLuchi, D.]]		[[Category: DeLuchi, D]]
	[[Category: Ortiz-Lombardia, M.]]		[[Category: Ortiz-Lombardia, M]]
	[[Category: Polier, S.]]		[[Category: Polier, S]]
	[[Category: Shevtsov, M B.]]		[[Category: Shevtsov, M B]]
	[[Category: Dna packaging]]		[[Category: Dna packaging]]
	[[Category: Sf6]]		[[Category: Sf6]]
	[[Category: Viral protein]]		[[Category: Viral protein]]

OCA at 04:29, 3 October 2014

2014-10-03T04:29:53Z

@@ Line 1: / Line 1: @@
-{{STRUCTURE_2cmp|  PDB=2cmp  |  SCENE=  }}
+==crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6==
-===crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6===
+<StructureSection load='2cmp' size='340' side='right' caption='[[2cmp]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
-{{ABSTRACT_PUBMED_23545641}}
+== Structural highlights ==
-==About this Structure==
+The 1.58 A resolution structure of the DNA-binding domain of bacteriophage SF6 small terminase provides new hints on DNA binding.,Benini S, Chechik M, Ortiz Lombardia M, Polier S, Leech A, Shevtsov MB, Alonso JC Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Apr 1;69(Pt 4):376-81., doi: 10.1107/S1744309113004399. Epub 2013 Mar 28. PMID:23545641<ref>PMID:23545641</ref>
-[[2cmp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_phage_sf6 Bacillus phage sf6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMP OCA].
 [[Category: Bacillus phage sf6]]
 [[Category: Alonso, J C.]]

OCA at 19:29, 17 April 2013

2013-04-17T19:29:45Z

← Older revision		Revision as of 19:29, 17 April 2013
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	{{STRUCTURE_2cmp\| PDB=2cmp \| SCENE= }}		{{STRUCTURE_2cmp\| PDB=2cmp \| SCENE= }}
	===crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6===		===crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6===
			{{ABSTRACT_PUBMED_23545641}}

	==About this Structure==		==About this Structure==

OCA at 21:56, 10 April 2013

2013-04-10T21:56:36Z

← Older revision		Revision as of 21:56, 10 April 2013
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	~~[[Image:2cmp.png\|left\|200px]]~~

	{{STRUCTURE_2cmp\| PDB=2cmp \| SCENE= }}		{{STRUCTURE_2cmp\| PDB=2cmp \| SCENE= }}
			===crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6===
	===~~CRYSTAL STRUCTURE OF THE~~ DNA ~~BINDING DOMAIN OF~~ G1P SMALL TERMINASE SUBUNIT ~~FROM BACTERIOPHAGE~~ SF6===


	==About this Structure==		==About this Structure==
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	[[Category: Benini, S.]]		[[Category: Benini, S.]]
	[[Category: Chechik, M.]]		[[Category: Chechik, M.]]
	[[Category: ~~Deluchi~~, D.]]		[[Category: DeLuchi, D.]]
	[[Category: Ortiz-Lombardia, M.]]		[[Category: Ortiz-Lombardia, M.]]
	[[Category: Polier, S.]]		[[Category: Polier, S.]]
	[[Category: Shevtsov, M B.]]		[[Category: Shevtsov, M B.]]
	~~[[Category: Bacteriophage]]~~
	~~[[Category: Dna binding domain]]~~
	[[Category: Dna packaging]]		[[Category: Dna packaging]]
	[[Category: Sf6]]		[[Category: Sf6]]
	[[Category: ~~Terminase~~]]		[[Category: Viral protein]]

OCA: Protected "2cmp" [edit=sysop:move=sysop]

2013-01-06T12:16:01Z

Protected "2cmp" [edit=sysop:move=sysop]

← Older revision	Revision as of 12:16, 6 January 2013
(No difference)