2db5 - Revision history

OCA at 11:37, 22 May 2024

2024-05-22T11:37:15Z

← Older revision		Revision as of 11:37, 22 May 2024
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	==Solution structure of the first PDZ domain of InaD-like protein==		==Solution structure of the first PDZ domain of InaD-like protein==
	<StructureSection load='2db5' size='340' side='right'caption='[[2db5~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>		<StructureSection load='2db5' size='340' side='right'caption='[[2db5]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Human Human~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>
	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>INADL, PATJ ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~9606 HUMAN])~~</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [https://pdbe.org/2db5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [https://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2db5 ProSAT], [https://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [https://pdbe.org/2db5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [https://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2db5 ProSAT], [https://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/INADL_HUMAN INADL_HUMAN]] Scaffolding protein that may bring different proteins into adjacent positions at the cell membrane. May regulate protein targeting, cell polarity and integrity of tight junctions. May regulate the surface expression and/or function of ASIC3 in sensory neurons.<ref>PMID:11927608</ref>		[https://www.uniprot.org/uniprot/INADL_HUMAN INADL_HUMAN] Scaffolding protein that may bring different proteins into adjacent positions at the cell membrane. May regulate protein targeting, cell polarity and integrity of tight junctions. May regulate the surface expression and/or function of ASIC3 in sensory neurons.<ref>PMID:11927608</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Human~~]]		[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Hayashi, F]]		[[Category: Hayashi F]]
	[[Category: Inoue, K]]		[[Category: Inoue K]]
	[[Category: Kurosaki, C]]		[[Category: Kurosaki C]]
	~~[[Category: Structural genomic~~]]		[[Category: Yokoyama S]]
	[[Category: Yokoyama, S]]
	~~[[Category: Hinadl]]~~
	~~[[Category: Inad-like protein]]~~
	~~[[Category: Inadl]]~~
	~~[[Category: Inadl protein]]~~
	~~[[Category: National project on protein structural and functional analyse]]~~
	~~[[Category: Nppsfa]]~~
	~~[[Category: Pals1-associated tight junction protein]]~~
	~~[[Category: Patj]]~~
	~~[[Category: Pdz domain]]~~
	~~[[Category: Protein associated to tight junction]]~~
	~~[[Category: Protein binding]]~~
	~~[[Category: Rsgi~~]]

OCA at 11:59, 3 February 2021

2021-02-03T11:59:11Z

← Older revision		Revision as of 11:59, 3 February 2021
Line 1:		Line 1:

	==Solution structure of the first PDZ domain of InaD-like protein==		==Solution structure of the first PDZ domain of InaD-like protein==
	<StructureSection load='2db5' size='340' side='right' caption='[[2db5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2db5' size='340' side='right'caption='[[2db5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [~~http~~://pdbe.org/2db5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2db5 ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [https://pdbe.org/2db5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [https://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2db5 ProSAT], [https://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/INADL_HUMAN INADL_HUMAN]] Scaffolding protein that may bring different proteins into adjacent positions at the cell membrane. May regulate protein targeting, cell polarity and integrity of tight junctions. May regulate the surface expression and/or function of ASIC3 in sensory neurons.<ref>PMID:11927608</ref>		[[https://www.uniprot.org/uniprot/INADL_HUMAN INADL_HUMAN]] Scaffolding protein that may bring different proteins into adjacent positions at the cell membrane. May regulate protein targeting, cell polarity and integrity of tight junctions. May regulate the surface expression and/or function of ASIC3 in sensory neurons.<ref>PMID:11927608</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Human]]		[[Category: Human]]
			[[Category: Large Structures]]
	[[Category: Hayashi, F]]		[[Category: Hayashi, F]]
	[[Category: Inoue, K]]		[[Category: Inoue, K]]

OCA at 06:23, 30 May 2018

2018-05-30T06:23:23Z

← Older revision		Revision as of 06:23, 30 May 2018
Line 1:		Line 1:

	==Solution structure of the first PDZ domain of InaD-like protein==		==Solution structure of the first PDZ domain of InaD-like protein==
	<StructureSection load='2db5' size='340' side='right' caption='[[2db5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2db5' size='340' side='right' caption='[[2db5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
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	<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [http://pdbe.org/2db5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [http://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [http://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [http://pdbe.org/2db5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [http://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2db5 ProSAT], [http://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/2db5_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/2db5_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 07:40, 9 February 2016

2016-02-09T07:40:31Z

← Older revision		Revision as of 07:40, 9 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2db5 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	== References ==		== References ==

OCA at 20:04, 10 September 2015

2015-09-10T20:04:06Z

← Older revision		Revision as of 20:04, 10 September 2015
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	<StructureSection load='2db5' size='340' side='right' caption='[[2db5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2db5' size='340' side='right' caption='[[2db5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Homo_sapiens Homo sapiens~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 ~~Homo sapiens~~])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [http://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [http://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [http://pdbe.org/2db5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [http://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [http://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Homo sapiens~~]]		[[Category: Human]]
	[[Category: Hayashi, F]]		[[Category: Hayashi, F]]
	[[Category: Inoue, K]]		[[Category: Inoue, K]]

OCA at 05:26, 25 December 2014

2014-12-25T05:26:21Z

← Older revision		Revision as of 05:26, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [http://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [http://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [http://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [http://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>
	<table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/INADL_HUMAN INADL_HUMAN]] Scaffolding protein that may bring different proteins into adjacent positions at the cell membrane. May regulate protein targeting, cell polarity and integrity of tight junctions. May regulate the surface expression and/or function of ASIC3 in sensory neurons.<ref>PMID:11927608</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 16:		Line 18:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
			== References ==
			<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Hayashi, F.]]		[[Category: Hayashi, F]]
	[[Category: Inoue, K.]]		[[Category: Inoue, K]]
	[[Category: Kurosaki, C.]]		[[Category: Kurosaki, C]]
	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]		[[Category: Structural genomic]]
	[[Category: Yokoyama, S.]]		[[Category: Yokoyama, S]]
	[[Category: Hinadl]]		[[Category: Hinadl]]
	[[Category: Inad-like protein]]		[[Category: Inad-like protein]]
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	[[Category: Protein associated to tight junction]]		[[Category: Protein associated to tight junction]]
	[[Category: Protein binding]]		[[Category: Protein binding]]
	~~[[Category: Riken structural genomics/proteomics initiative]]~~
	[[Category: Rsgi]]		[[Category: Rsgi]]
	~~[[Category: Structural genomic]]~~

OCA at 00:55, 30 September 2014

2014-09-30T00:55:38Z

← Older revision		Revision as of 00:55, 30 September 2014
Line 1:		Line 1:
	~~[[Image:2db5.png\|left\|200px]]~~		==Solution structure of the first PDZ domain of InaD-like protein==
			<StructureSection load='2db5' size='340' side='right' caption='[[2db5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	~~{{STRUCTURE_2db5\| PDB=2db5 \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DB5 FirstGlance]. <br>
	===Solution structure of the first PDZ domain of InaD-like protein===		</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">INADL, PATJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2db5 RCSB], [http://www.ebi.ac.uk/pdbsum/2db5 PDBsum], [http://www.topsan.org/Proteins/RSGI/2db5 TOPSAN]</span></td></tr>
			<table>
	==~~About this Structure~~==		== Evolutionary Conservation ==
	[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA].		[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/2db5_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			__TOC__
			</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Hayashi, F.]]		[[Category: Hayashi, F.]]

OCA: Protected "2db5" [edit=sysop:move=sysop]

2013-01-06T10:14:13Z

Protected "2db5" [edit=sysop:move=sysop]

← Older revision	Revision as of 10:14, 6 January 2013
(No difference)

OCA at 10:14, 6 January 2013

2013-01-06T10:14:11Z

← Older revision		Revision as of 10:14, 6 January 2013
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	~~{{Seed}}~~
	[[Image:2db5.png\|left\|200px]]		[[Image:2db5.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2db5", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2db5\| PDB=2db5 \| SCENE= }}		{{STRUCTURE_2db5\| PDB=2db5 \| SCENE= }}

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	==About this Structure==		==About this Structure==
	~~2DB5~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA].		[[2db5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA].
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Hayashi, F.]]		[[Category: Hayashi, F.]]
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	[[Category: Yokoyama, S.]]		[[Category: Yokoyama, S.]]
	[[Category: Hinadl]]		[[Category: Hinadl]]
	[[Category: Inad-like ~~protein,inadl~~ protein]]		[[Category: Inad-like protein]]
	[[Category: Inadl]]		[[Category: Inadl]]
			[[Category: Inadl protein]]
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
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	[[Category: Pdz domain]]		[[Category: Pdz domain]]
	[[Category: Protein associated to tight junction]]		[[Category: Protein associated to tight junction]]
			[[Category: Protein binding]]
	[[Category: Riken structural genomics/proteomics initiative]]		[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:04:47 2008''~~

OCA at 14:04, 16 November 2008

2008-11-16T14:04:48Z

← Older revision		Revision as of 14:04, 16 November 2008
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
	2DB5 is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA].		2DB5 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB5 OCA].
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	~~[[Category: Single protein]]~~
	[[Category: Hayashi, F.]]		[[Category: Hayashi, F.]]
	[[Category: Inoue, K.]]		[[Category: Inoue, K.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Sep 29 02~~:13:31 2008''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:04:47 2008''