2fa8 - Revision history

OCA at 07:58, 30 October 2024

2024-10-30T07:58:56Z

← Older revision		Revision as of 07:58, 30 October 2024
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	<StructureSection load='2fa8' size='340' side='right'caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2fa8' size='340' side='right'caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Agrfc Agrfc~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>
	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~atu0228 ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])~~</td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [https://pdbe.org/2fa8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [https://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fa8 ProSAT], [https://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [https://pdbe.org/2fa8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [https://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fa8 ProSAT], [https://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/A9CKJ2_AGRFC A9CKJ2_AGRFC]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/2fa8_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/2fa8_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Agrfc~~]]		[[Category: Agrobacterium fabrum str. C58]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Edwards, A]]		[[Category: Edwards A]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak A]]
	[[Category: Kim, Y]]		[[Category: Kim Y]]
	~~[[Category: Structural genomic~~]]		[[Category: Savchenko A]]
	[[Category: Savchenko, A]]		[[Category: Xu X]]
	[[Category: Xu, X]]		[[Category: Zheng H]]
	[[Category: Zheng, H]]
	~~[[Category: Helix bundle]]~~
	~~[[Category: Alph-beta structure]]~~
	~~[[Category: Mcsg]]~~
	~~[[Category: PSI, Protein structure initiative]]~~
	~~[[Category: Unknown function~~]]

OCA at 07:14, 24 February 2021

2021-02-24T07:14:02Z

← Older revision		Revision as of 07:14, 24 February 2021
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	==Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens==		==Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens==
	<StructureSection load='2fa8' size='340' side='right' caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2fa8' size='340' side='right'caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [~~http~~://pdbe.org/2fa8 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2fa8 ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [https://pdbe.org/2fa8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [https://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fa8 ProSAT], [https://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</StructureSection>		</StructureSection>
	[[Category: Agrfc]]		[[Category: Agrfc]]
			[[Category: Large Structures]]
	[[Category: Edwards, A]]		[[Category: Edwards, A]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]

OCA at 09:21, 14 June 2018

2018-06-14T09:21:38Z

← Older revision		Revision as of 09:21, 14 June 2018
Line 1:		Line 1:

	==Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens==		==Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens==
	<StructureSection load='2fa8' size='340' side='right' caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2fa8' size='340' side='right' caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Agrt5 Agrt5~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 ~~AGRT5~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://pdbe.org/2fa8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://pdbe.org/2fa8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2fa8 ProSAT], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/2fa8_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/2fa8_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 19:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Agrt5~~]]		[[Category: Agrfc]]
	[[Category: Edwards, A]]		[[Category: Edwards, A]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]

OCA at 03:25, 8 February 2016

2016-02-08T03:25:48Z

← Older revision		Revision as of 03:25, 8 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fa8 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 07:24, 10 September 2015

2015-09-10T07:24:51Z

← Older revision		Revision as of 07:24, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2fa8' size='340' side='right' caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2fa8' size='340' side='right' caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 ~~Agrobacterium tumefaciens str. C58~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRT5])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://pdbe.org/2fa8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Agrobacterium tumefaciens str. c58~~]]		[[Category: Agrt5]]
	[[Category: Edwards, A]]		[[Category: Edwards, A]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]

OCA at 20:14, 24 December 2014

2014-12-24T20:14:03Z

← Older revision		Revision as of 20:14, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Agrobacterium tumefaciens str. c58]]		[[Category: Agrobacterium tumefaciens str. c58]]
	[[Category: Edwards, A.]]		[[Category: Edwards, A]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A]]
	[[Category: Kim, Y.]]		[[Category: Kim, Y]]
	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]		[[Category: Structural genomic]]
	[[Category: Savchenko, A.]]		[[Category: Savchenko, A]]
	[[Category: Xu, X.]]		[[Category: Xu, X]]
	[[Category: Zheng, H.]]		[[Category: Zheng, H]]
	[[Category: ~~4 helix~~ bundle]]		[[Category: Helix bundle]]
	[[Category: Alph-beta structure]]		[[Category: Alph-beta structure]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
	[[Category: ~~Midwest center for structural genomic]]~~		[[Category: PSI, Protein structure initiative]]
	~~[[Category:~~ Protein structure initiative]]
	~~[[Category: Psi]]~~
	~~[[Category: Structural genomic~~]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 00:33, 30 September 2014

2014-09-30T00:33:54Z

← Older revision		Revision as of 00:33, 30 September 2014
Line 1:		Line 1:
	~~[[Image:2fa8.png\|left\|200px]]~~		==Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens==
			<StructureSection load='2fa8' size='340' side='right' caption='[[2fa8]], [[Resolution\|resolution]] 1.90Å' scene=''>
	~~{{STRUCTURE_2fa8\| PDB=2fa8 \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FA8 FirstGlance]. <br>
	===Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens===		</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
			<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">atu0228 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fa8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fa8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fa8 RCSB], [http://www.ebi.ac.uk/pdbsum/2fa8 PDBsum], [http://www.topsan.org/Proteins/MCSG/2fa8 TOPSAN]</span></td></tr>
	==~~About this Structure~~==		<table>
	[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA].		== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/2fa8_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			__TOC__
			</StructureSection>
	[[Category: Agrobacterium tumefaciens str. c58]]		[[Category: Agrobacterium tumefaciens str. c58]]
	[[Category: Edwards, A.]]		[[Category: Edwards, A.]]

OCA: Protected "2fa8" [edit=sysop:move=sysop]

2013-01-07T13:22:18Z

Protected "2fa8" [edit=sysop:move=sysop]

← Older revision	Revision as of 13:22, 7 January 2013
(No difference)

OCA at 13:22, 7 January 2013

2013-01-07T13:22:16Z

← Older revision		Revision as of 13:22, 7 January 2013
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	~~{{Seed}}~~
	[[Image:2fa8.png\|left\|200px]]		[[Image:2fa8.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2fa8", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2fa8\| PDB=2fa8 \| SCENE= }}		{{STRUCTURE_2fa8\| PDB=2fa8 \| SCENE= }}

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	==About this Structure==		==About this Structure==
	~~2FA8~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/~~Agrobacterium_tumefaciens~~ Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA].		[[2fa8]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA].
	[[Category: Agrobacterium tumefaciens]]		[[Category: Agrobacterium tumefaciens str. c58]]
	[[Category: Edwards, A.]]		[[Category: Edwards, A.]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]
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	[[Category: Psi]]		[[Category: Psi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
			[[Category: Unknown function]]
	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 15:44:52 2008''~~

OCA at 13:44, 16 November 2008

2008-11-16T13:44:57Z

← Older revision		Revision as of 13:44, 16 November 2008
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	==About this Structure==		==About this Structure==
	2FA8 is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA].		2FA8 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FA8 OCA].
	[[Category: Agrobacterium tumefaciens]]		[[Category: Agrobacterium tumefaciens]]
	~~[[Category: Single protein]]~~
	[[Category: Edwards, A.]]		[[Category: Edwards, A.]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Sep 29 00~~:48:14 2008''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:44:52 2008''