2fdr - Revision history

OCA at 00:55, 21 November 2024

2024-11-21T00:55:45Z

← Older revision		Revision as of 00:55, 21 November 2024
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	<StructureSection load='2fdr' size='340' side='right'caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2fdr' size='340' side='right'caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Agrt5 Agrt5~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FDR FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene><~~/td></tr>~~		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;~~'>~~[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]~~</~~div~~></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [https://pdbe.org/2fdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [https://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdr ProSAT], [https://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [https://pdbe.org/2fdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [https://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdr ProSAT], [https://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
	</table>		</table>
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdr_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdr_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Agrt5~~]]		[[Category: Agrobacterium fabrum str. C58]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Edwards, A]]		[[Category: Edwards A]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak A]]
	~~[[Category: Structural genomic~~]]		[[Category: Nocek B]]
	[[Category: Nocek, B]]		[[Category: Savchenko A]]
	[[Category: Savchenko, A]]		[[Category: Xu X]]
	[[Category: Xu, X]]		[[Category: Zheng H]]
	[[Category: Zheng, H]]
	~~[[Category: Agrobacterium tumefacien]]~~
	~~[[Category: Conserved hypothetical]]~~
	~~[[Category: Had-superfamily hydrolase]]~~
	~~[[Category: Mcsg]]~~
	~~[[Category: PSI, Protein structure initiative]]~~
	~~[[Category: Putative b-phosphoglucomutase]]~~
	~~[[Category: Sad]]~~
	~~[[Category: Unknown function~~]]

OCA at 09:54, 5 May 2021

2021-05-05T09:54:09Z

← Older revision		Revision as of 09:54, 5 May 2021
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	<StructureSection load='2fdr' size='340' side='right'caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2fdr' size='340' side='right'caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2FDR FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</div></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [~~http~~://pdbe.org/2fdr PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdr ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [https://pdbe.org/2fdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [https://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdr ProSAT], [https://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 09:38, 24 July 2019

2019-07-24T09:38:38Z

← Older revision		Revision as of 09:38, 24 July 2019
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	==Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58==		==Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58==
	<StructureSection load='2fdr' size='340' side='right' caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2fdr' size='340' side='right'caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FDR FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdr_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdr_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
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	</StructureSection>		</StructureSection>
	[[Category: Agrt5]]		[[Category: Agrt5]]
			[[Category: Large Structures]]
	[[Category: Edwards, A]]		[[Category: Edwards, A]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]

OCA at 07:37, 18 October 2017

2017-10-18T07:37:14Z

← Older revision		Revision as of 07:37, 18 October 2017
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	==Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58==		==Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58==
	<StructureSection load='2fdr' size='340' side='right' caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2fdr' size='340' side='right' caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>
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	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [http://pdbe.org/2fdr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [http://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [http://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [http://pdbe.org/2fdr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [http://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdr ProSAT], [http://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 14:02, 7 February 2016

2016-02-07T14:02:26Z

← Older revision		Revision as of 14:02, 7 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fdr ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 02:11, 10 September 2015

2015-09-10T02:11:18Z

← Older revision		Revision as of 02:11, 10 September 2015
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	<StructureSection load='2fdr' size='340' side='right' caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2fdr' size='340' side='right' caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FDR FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [http://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [http://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [http://pdbe.org/2fdr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [http://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [http://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Agrobacterium tumefaciens str. c58~~]]		[[Category: Agrt5]]
	[[Category: Edwards, A]]		[[Category: Edwards, A]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]

OCA at 15:45, 24 December 2014

2014-12-24T15:45:23Z

← Older revision		Revision as of 15:45, 24 December 2014
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FDR FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [http://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [http://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [http://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [http://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Agrobacterium tumefaciens str. c58]]		[[Category: Agrobacterium tumefaciens str. c58]]
	[[Category: Edwards, A.]]		[[Category: Edwards, A]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A]]
	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]		[[Category: Structural genomic]]
	[[Category: Nocek, B.]]		[[Category: Nocek, B]]
	[[Category: Savchenko, A.]]		[[Category: Savchenko, A]]
	[[Category: Xu, X.]]		[[Category: Xu, X]]
	[[Category: Zheng, H.]]		[[Category: Zheng, H]]
	[[Category: Agrobacterium tumefacien]]		[[Category: Agrobacterium tumefacien]]
	[[Category: Conserved hypothetical]]		[[Category: Conserved hypothetical]]
	[[Category: Had-superfamily hydrolase]]		[[Category: Had-superfamily hydrolase]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
	[[Category: ~~Midwest center for structural genomic]]~~		[[Category: PSI, Protein structure initiative]]
	~~[[Category:~~ Protein structure initiative]]
	~~[[Category: Psi~~]]
	[[Category: Putative b-phosphoglucomutase]]		[[Category: Putative b-phosphoglucomutase]]
	[[Category: Sad]]		[[Category: Sad]]
	~~[[Category: Structural genomic]]~~
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 01:27, 30 September 2014

2014-09-30T01:27:32Z

← Older revision		Revision as of 01:27, 30 September 2014
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	~~[[Image:2fdr.png\|left\|200px]]~~		==Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58==
			<StructureSection load='2fdr' size='340' side='right' caption='[[2fdr]], [[Resolution\|resolution]] 2.00Å' scene=''>
	~~{{STRUCTURE_2fdr\| PDB=2fdr \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FDR FirstGlance]. <br>
	===Crystal Structure of Conserved Haloacid Dehalogenase-like Protein of Unknown Function ATU0790 from Agrobacterium tumefaciens str. C58===		</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
			<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
			<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1o03\|1o03]], [[2ah5\|2ah5]], [[1fez\|1fez]]</td></tr>
	==~~About this Structure~~==		<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fdr RCSB], [http://www.ebi.ac.uk/pdbsum/2fdr PDBsum], [http://www.topsan.org/Proteins/MCSG/2fdr TOPSAN]</span></td></tr>
	[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA].		<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdr_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			__TOC__
			</StructureSection>
	[[Category: Agrobacterium tumefaciens str. c58]]		[[Category: Agrobacterium tumefaciens str. c58]]
	[[Category: Edwards, A.]]		[[Category: Edwards, A.]]

OCA: Protected "2fdr" [edit=sysop:move=sysop]

2013-01-07T14:03:42Z

Protected "2fdr" [edit=sysop:move=sysop]

← Older revision	Revision as of 14:03, 7 January 2013
(No difference)

OCA at 14:03, 7 January 2013

2013-01-07T14:03:37Z

← Older revision		Revision as of 14:03, 7 January 2013
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	~~{{Seed}}~~
	[[Image:2fdr.png\|left\|200px]]		[[Image:2fdr.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2fdr", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2fdr\| PDB=2fdr \| SCENE= }}		{{STRUCTURE_2fdr\| PDB=2fdr \| SCENE= }}

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	==About this Structure==		==About this Structure==
	~~2FDR~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/~~Agrobacterium_tumefaciens~~ Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA].		[[2fdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDR OCA].
	[[Category: Agrobacterium tumefaciens]]		[[Category: Agrobacterium tumefaciens str. c58]]
	[[Category: Edwards, A.]]		[[Category: Edwards, A.]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]
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	[[Category: Sad]]		[[Category: Sad]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
			[[Category: Unknown function]]
	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 16:47:17 2008''~~