2i2e - Revision history

OCA: Protected "2i2e" [edit=sysop:move=sysop]

2012-03-08T05:40:44Z

Protected "2i2e" [edit=sysop:move=sysop]

← Older revision	Revision as of 05:40, 8 March 2012
(No difference)

OCA: Redirecting to 4dy6

2012-03-08T05:40:42Z

Redirecting to 4dy6

← Older revision		Revision as of 05:40, 8 March 2012
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	~~{{Seed}}~~		#REDIRECT [[4dy6]] This PDB entry is obsolete and replaced by 4dy6
	[[~~Image:2i2e.png\|left\|200px~~]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2i2e", creates the "Structure Box" on the page.~~
	~~You may change the~~ PDB ~~parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	~~{{STRUCTURE_2i2e\| PDB=2i2e \| SCENE= }}~~

	~~===Crystal structure of LmNADK1===~~


	~~<!--~~
	~~The line below this paragraph, {{ABSTRACT_PUBMED_17686780}}, adds the Publication Abstract to the page~~
	~~(as it appears on PubMed at http://www.pubmed.gov), where 17686780 is the PubMed ID number.~~
	~~-->~~
	~~{{ABSTRACT_PUBMED_17686780}}~~

	~~==About this Structure==~~
	~~2I2E~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].

	~~==Reference==~~
	~~<ref group="xtra">PMID:17686780</ref><references group="xtra"/>~~
	~~[[Category: Listeria monocytogenes]]~~
	~~[[Category: Arold, S.]]~~
	~~[[Category: Assairi, L.]]~~
	~~[[Category: Labesse, G.]]~~
	~~[[Category: Pochet, S.]]~~
	~~[[Category: Poncet-Montange, G.]]~~
	~~[[Category: Crystal structure of lmnadk1 bound to a nad analog]]~~
	~~[[Category: Transferase]]~~

	~~''Page seeded~~ by ~~[http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:55:22 2009''~~

OCA at 16:55, 17 February 2009

2009-02-17T16:55:23Z

← Older revision		Revision as of 16:55, 17 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
	2I2E is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].		2I2E is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].

	==Reference==		==Reference==
	~~NAD kinases use substrate-assisted catalysis for specific recognition of NAD., Poncet-Montange G, Assairi L, Arold S, Pochet S, Labesse G, J Biol Chem. 2007 Nov 23;282(47):33925-34. Epub 2007 Aug 8.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/17686780 17686780]~~		<ref group="xtra">PMID:17686780</ref><references group="xtra"/>
	[[Category: Listeria monocytogenes]]		[[Category: Listeria monocytogenes]]
	~~[[Category: Single protein]]~~
	[[Category: Arold, S.]]		[[Category: Arold, S.]]
	[[Category: Assairi, L.]]		[[Category: Assairi, L.]]
Line 34:		Line 33:
	[[Category: Transferase]]		[[Category: Transferase]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Nov 5 10~~:43:~~01 2008~~''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:55:22 2009''

OCA at 08:43, 5 November 2008

2008-11-05T08:43:01Z

← Older revision		Revision as of 08:43, 5 November 2008
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	[[Image:2i2e.~~jpg~~\|left\|200px]]		{{Seed}}
			[[Image:2i2e.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_2i2e\| PDB=2i2e \| SCENE= }}		{{STRUCTURE_2i2e\| PDB=2i2e \| SCENE= }}

	~~'''~~Crystal structure of LmNADK1~~'''~~		===Crystal structure of LmNADK1===


			<!--
			The line below this paragraph, {{ABSTRACT_PUBMED_17686780}}, adds the Publication Abstract to the page
			(as it appears on PubMed at http://www.pubmed.gov), where 17686780 is the PubMed ID number.
			-->
			{{ABSTRACT_PUBMED_17686780}}

	==About this Structure==		==About this Structure==
	2I2E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].		2I2E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].

			==Reference==
			NAD kinases use substrate-assisted catalysis for specific recognition of NAD., Poncet-Montange G, Assairi L, Arold S, Pochet S, Labesse G, J Biol Chem. 2007 Nov 23;282(47):33925-34. Epub 2007 Aug 8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17686780 17686780]
	[[Category: Listeria monocytogenes]]		[[Category: Listeria monocytogenes]]
	[[Category: Single protein]]		[[Category: Single protein]]
Line 23:		Line 33:
	[[Category: Crystal structure of lmnadk1 bound to a nad analog]]		[[Category: Crystal structure of lmnadk1 bound to a nad analog]]
	[[Category: Transferase]]		[[Category: Transferase]]
	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sun May~~ ~~4 06~~:59:44 2008''
			''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 5 10:43:01 2008''

OCA at 03:59, 4 May 2008

2008-05-04T03:59:45Z

← Older revision		Revision as of 03:59, 4 May 2008
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	[[Image:2i2e.jpg\|left\|200px]]		[[Image:2i2e.jpg\|left\|200px]]

	~~{{Structure~~		<!--
	~~\|PDB= 2i2e \|SIZE=350\|CAPTION= <scene name='initialview01'>2i2e~~<~~/scene>, resolution 2.200Å~~		The line below this paragraph, containing "STRUCTURE_2i2e", creates the "Structure Box" on the page.
	~~\|SITE=~~		You may change the PDB parameter (which sets the PDB file loaded into the applet)
	~~\|LIGAND= <scene name='pdbligand=A22:[(2R,3S,4R,5R)~~-5-~~(6-AMINO-9H-PURIN-9-YL)-3~~,~~4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+[(2R~~,~~3R,4R,5R)-5-~~(~~6-AMINO-9H-PURIN-9-YL~~)~~-3-HYDROXY-4-~~(~~PHOSPHONOOXY~~)~~TETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>A22</scene>~~, ~~<scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>~~		or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
	~~\|ACTIVITY= <span class='plainlinks'>[http://en~~.~~wikipedia.org/wiki/NAD(+)_kinase NAD(+) kinase], with EC number [http://www.brenda~~-~~enzymes.info/php/result_flat.php4?ecno=2.7.1.23 2.7.1.23] </span~~>		or leave the SCENE parameter empty for the default display.
	\|~~GENE~~= ~~ppnK1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1639 Listeria monocytogenes])~~		-->
	\|~~DOMAIN~~=		{{STRUCTURE_2i2e\| PDB=2i2e \| SCENE= }}
	~~\|RELATEDENTRY=[[2i1w\|2I1W]], [[2i29\|2I29]], [[2i2a\|2I2A]], [[2i2b\|2I2B]], [[2i2c\|2I2C]], [[2i2d\|2I2D]], [[2i2f\|2I2F]]~~
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i2e OCA], [http://www.ebi.ac.uk/pdbsum/2i2e PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2i2e RCSB]</span>
	}}

	'''Crystal structure of LmNADK1'''		'''Crystal structure of LmNADK1'''
Line 18:		Line 15:
	2I2E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].		2I2E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].
	[[Category: Listeria monocytogenes]]		[[Category: Listeria monocytogenes]]
	~~[[Category: NAD(+) kinase]]~~
	[[Category: Single protein]]		[[Category: Single protein]]
	[[Category: Arold, S.]]		[[Category: Arold, S.]]
Line 25:		Line 21:
	[[Category: Pochet, S.]]		[[Category: Pochet, S.]]
	[[Category: Poncet-Montange, G.]]		[[Category: Poncet-Montange, G.]]
	[[Category: ~~crystal~~ structure of lmnadk1 bound to a nad analog]]		[[Category: Crystal structure of lmnadk1 bound to a nad analog]]
	[[Category: ~~transferase~~]]		[[Category: Transferase]]
			''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 06:59:44 2008''
	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Mar 31 03~~:38:55 2008''

OCA at 00:39, 31 March 2008

2008-03-31T00:39:00Z

← Older revision		Revision as of 00:39, 31 March 2008
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	\|PDB= 2i2e \|SIZE=350\|CAPTION= <scene name='initialview01'>2i2e</scene>, resolution 2.200Å		\|PDB= 2i2e \|SIZE=350\|CAPTION= <scene name='initialview01'>2i2e</scene>, resolution 2.200Å
	\|SITE=		\|SITE=
	\|LIGAND= <scene name='pdbligand=A22:[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+[(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>A22</scene> ~~and~~ <scene name='pdbligand=CIT:CITRIC ACID'>CIT</scene>		\|LIGAND= <scene name='pdbligand=A22:[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+[(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>A22</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>
	\|ACTIVITY= [http://en.wikipedia.org/wiki/NAD(+)_kinase NAD(+) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.23 2.7.1.23]		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/NAD(+)_kinase NAD(+) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.23 2.7.1.23] </span>
	\|GENE= ppnK1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1639 Listeria monocytogenes])		\|GENE= ppnK1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1639 Listeria monocytogenes])
			\|DOMAIN=
			\|RELATEDENTRY=[[2i1w\|2I1W]], [[2i29\|2I29]], [[2i2a\|2I2A]], [[2i2b\|2I2B]], [[2i2c\|2I2C]], [[2i2d\|2I2D]], [[2i2f\|2I2F]]
			\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i2e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i2e OCA], [http://www.ebi.ac.uk/pdbsum/2i2e PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2i2e RCSB]</span>
	}}		}}

Line 22:		Line 25:
	[[Category: Pochet, S.]]		[[Category: Pochet, S.]]
	[[Category: Poncet-Montange, G.]]		[[Category: Poncet-Montange, G.]]
	~~[[Category: A22]]~~
	~~[[Category: CIT]]~~
	[[Category: crystal structure of lmnadk1 bound to a nad analog]]		[[Category: crystal structure of lmnadk1 bound to a nad analog]]
	[[Category: transferase]]		[[Category: transferase]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu~~ Mar ~~20 17~~:24:37 2008''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:38:55 2008''

OCA at 15:24, 20 March 2008

2008-03-20T15:24:40Z

← Older revision		Revision as of 15:24, 20 March 2008
Line 1:		Line 1:
	[[Image:2i2e.jpg\|left\|200px]]~~<br /><applet load~~="2i2e~~" size~~="350~~" color~~=~~"white" frame~~=~~"true" align="right" spinBox="true"~~		[[Image:2i2e.jpg\|left\|200px]]
	~~caption="~~2i2e, resolution 2.200Å" />
	'''Crystal structure of LmNADK1'''~~<br />~~		{{Structure
			\|PDB= 2i2e \|SIZE=350\|CAPTION= <scene name='initialview01'>2i2e</scene>, resolution 2.200Å
			\|SITE=
			\|LIGAND= <scene name='pdbligand=A22:[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+[(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>A22</scene> and <scene name='pdbligand=CIT:CITRIC ACID'>CIT</scene>
			\|ACTIVITY= [http://en.wikipedia.org/wiki/NAD(+)_kinase NAD(+) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.23 2.7.1.23]
			\|GENE= ppnK1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1639 Listeria monocytogenes])
			}}

			'''Crystal structure of LmNADK1'''


	==About this Structure==		==About this Structure==
	2I2E is a [~~http://en.wikipedia.org/wiki/Single_protein~~ Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes~~] with <scene name='pdbligand=A22:'>A22</scene> and <scene name='pdbligand=CIT:'>CIT</scene> as [http://en.wikipedia.org/wiki/ligands ligands~~]. ~~Active as [http://en.wikipedia.org/wiki/NAD(+)_kinase NAD(+) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.23 2.7.1.23]~~ Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].		2I2E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].
	[[Category: Listeria monocytogenes]]		[[Category: Listeria monocytogenes]]
	[[Category: NAD(+) kinase]]		[[Category: NAD(+) kinase]]
Line 18:		Line 27:
	[[Category: transferase]]		[[Category: transferase]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu ~~Feb 21~~ 17:48:24 2008''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:24:37 2008''

OCA at 15:48, 21 February 2008

2008-02-21T15:48:25Z

← Older revision		Revision as of 15:48, 21 February 2008
Line 18:		Line 18:
	[[Category: transferase]]		[[Category: transferase]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Jan 23 14~~:16:07 2008''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:48:24 2008''

OCA: New page: 200px
'''Crystal structure o...
2008-01-23T12:16:08Z

New page: left|200px<br /><applet load="2i2e" size="350" color="white" frame="true" align="right" spinBox="true" caption="2i2e, resolution 2.200Å" /> '''Crystal structure o...

New page
[[Image:2i2e.jpg|left|200px]]<br /><applet load="2i2e" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2i2e, resolution 2.200Å" />
'''Crystal structure of LmNADK1'''<br />

==About this Structure==
2I2E is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes] with <scene name='pdbligand=A22:'>A22</scene> and <scene name='pdbligand=CIT:'>CIT</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/NAD(+)_kinase NAD(+) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.23 2.7.1.23] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2E OCA].
[[Category: Listeria monocytogenes]]
[[Category: NAD(+) kinase]]
[[Category: Single protein]]
[[Category: Arold, S.]]
[[Category: Assairi, L.]]
[[Category: Labesse, G.]]
[[Category: Pochet, S.]]
[[Category: Poncet-Montange, G.]]
[[Category: A22]]
[[Category: CIT]]
[[Category: crystal structure of lmnadk1 bound to a nad analog]]
[[Category: transferase]]

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 14:16:07 2008''