2ift - Revision history

OCA at 09:11, 6 November 2024

2024-11-06T09:11:58Z

← Older revision		Revision as of 09:11, 6 November 2024
Line 15:		Line 15:
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/2ift_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/2ift_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>

OCA at 10:10, 30 August 2023

2023-08-30T10:10:36Z

← Older revision		Revision as of 10:10, 30 August 2023
Line 3:		Line 3:
	<StructureSection load='2ift' size='340' side='right'caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2ift' size='340' side='right'caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacterium_influenzae"_lehmann_and_neumann_1896 "bacterium~~ influenzae~~" lehmann and neumann 1896~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IFT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IFT FirstGlance]. <br>
	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>HI0767 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~727~~ "~~Bacterium influenzae~~" ~~Lehmann and Neumann 1896])~~</td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [https://pdbe.org/2ift PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [https://www.ebi.ac.uk/pdbsum/2ift PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ift ProSAT], [https://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [https://pdbe.org/2ift PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [https://www.ebi.ac.uk/pdbsum/2ift PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ift ProSAT], [https://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/RSMD_HAEIN RSMD_HAEIN]] Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle.		[https://www.uniprot.org/uniprot/RSMD_HAEIN RSMD_HAEIN] Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Bacterium~~ influenzae ~~lehmann and neumann 1896~~]]		[[Category: Haemophilus influenzae]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Acton~~, T B~~]]		[[Category: Acton TB]]
	[[Category: Cunningham, K]]		[[Category: Cunningham K]]
	[[Category: Hunt~~, J F~~]]		[[Category: Hunt JF]]
	[[Category: Janjua, H]]		[[Category: Janjua H]]
	[[Category: Liu, J]]		[[Category: Liu J]]
	[[Category: Ma~~, L C~~]]		[[Category: Ma LC]]
	[[Category: Montelione~~, G T]]~~		[[Category: Montelione GT]]
	~~[[Category: Structural genomic~~]]		[[Category: Seetharaman J]]
	[[Category: Seetharaman, J]]		[[Category: Shastry R]]
	[[Category: Shastry, R]]		[[Category: Su M]]
	[[Category: Su, M]]		[[Category: Tong L]]
	[[Category: Tong, L]]		[[Category: Vorobiev SM]]
	[[Category: Vorobiev~~, S M~~]]		[[Category: Xiao R]]
	[[Category: Xiao, R]]
	~~[[Category: Hi0767]]~~
	~~[[Category: Methylase]]~~
	~~[[Category: Nesg]]~~
	~~[[Category: PSI, Protein structure initiative]]~~
	~~[[Category: Transferase]]~~
	~~[[Category: Y767_haein~~]]

OCA at 11:15, 31 March 2021

2021-03-31T11:15:12Z

← Older revision		Revision as of 11:15, 31 March 2021
Line 1:		Line 1:

	==Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.==		==Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.==
	<StructureSection load='2ift' size='340' side='right' caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2ift' size='340' side='right'caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacterium_influenzae"_lehmann_and_neumann_1896 "bacterium influenzae" lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2IFT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_influenzae"_lehmann_and_neumann_1896 "bacterium influenzae" lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IFT FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 "Bacterium influenzae" Lehmann and Neumann 1896])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 "Bacterium influenzae" Lehmann and Neumann 1896])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [~~http~~://pdbe.org/2ift PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ift PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ift ProSAT], [~~http~~://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [https://pdbe.org/2ift PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [https://www.ebi.ac.uk/pdbsum/2ift PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ift ProSAT], [https://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/RSMD_HAEIN RSMD_HAEIN]] Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle.		[[https://www.uniprot.org/uniprot/RSMD_HAEIN RSMD_HAEIN]] Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Bacterium influenzae lehmann and neumann 1896]]		[[Category: Bacterium influenzae lehmann and neumann 1896]]
			[[Category: Large Structures]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Cunningham, K]]		[[Category: Cunningham, K]]

OCA at 08:38, 4 July 2018

2018-07-04T08:38:38Z

← Older revision		Revision as of 08:38, 4 July 2018
Line 1:		Line 1:

	==Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.==		==Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.==
	<StructureSection load='2ift' size='340' side='right' caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2ift' size='340' side='right' caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 "Bacterium influenzae" Lehmann and Neumann 1896])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 "Bacterium influenzae" Lehmann and Neumann 1896])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [http://pdbe.org/2ift PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [http://www.ebi.ac.uk/pdbsum/2ift PDBsum], [http://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [http://pdbe.org/2ift PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [http://www.ebi.ac.uk/pdbsum/2ift PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ift ProSAT], [http://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/2ift_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/2ift_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ift ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 00:17, 12 September 2015

2015-09-12T00:17:59Z

← Older revision		Revision as of 00:17, 12 September 2015
Line 2:		Line 2:
	<StructureSection load='2ift' size='340' side='right' caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2ift' size='340' side='right' caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Haemophilus_influenzae Haemophilus~~ influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2IFT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacterium_influenzae"_lehmann_and_neumann_1896 "bacterium influenzae" lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2IFT FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 ~~Haemophilus~~ influenzae])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 "Bacterium influenzae" Lehmann and Neumann 1896])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [http://www.ebi.ac.uk/pdbsum/2ift PDBsum], [http://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [http://pdbe.org/2ift PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [http://www.ebi.ac.uk/pdbsum/2ift PDBsum], [http://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>
	</table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/RSMD_HAEIN RSMD_HAEIN]] Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Haemophilus~~ influenzae]]		[[Category: Bacterium influenzae lehmann and neumann 1896]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Cunningham, K]]		[[Category: Cunningham, K]]

OCA at 08:43, 16 January 2015

2015-01-16T08:43:54Z

← Older revision		Revision as of 08:43, 16 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2IFT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2IFT FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 Haemophilus influenzae])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 Haemophilus influenzae])</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [http://www.ebi.ac.uk/pdbsum/2ift PDBsum], [http://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [http://www.ebi.ac.uk/pdbsum/2ift PDBsum], [http://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Haemophilus influenzae]]		[[Category: Haemophilus influenzae]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B]]
	[[Category: Cunningham, K.]]		[[Category: Cunningham, K]]
	[[Category: Hunt, J F.]]		[[Category: Hunt, J F]]
	[[Category: Janjua, H.]]		[[Category: Janjua, H]]
	[[Category: Liu, J.]]		[[Category: Liu, J]]
	[[Category: Ma, L C.]]		[[Category: Ma, L C]]
	[[Category: Montelione, G T.]]		[[Category: Montelione, G T]]
	[[Category: ~~NESG, Northeast~~ Structural ~~Genomics Consortium.~~]]		[[Category: Structural genomic]]
	[[Category: Seetharaman, J.]]		[[Category: Seetharaman, J]]
	[[Category: Shastry, R.]]		[[Category: Shastry, R]]
	[[Category: Su, M.]]		[[Category: Su, M]]
	[[Category: Tong, L.]]		[[Category: Tong, L]]
	[[Category: Vorobiev, S M.]]		[[Category: Vorobiev, S M]]
	[[Category: Xiao, R.]]		[[Category: Xiao, R]]
	[[Category: Hi0767]]		[[Category: Hi0767]]
	[[Category: Methylase]]		[[Category: Methylase]]
	[[Category: Nesg]]		[[Category: Nesg]]
	[[Category: ~~Northeast structural genomics consortium]]~~		[[Category: PSI, Protein structure initiative]]
	~~[[Category:~~ Protein structure initiative]]
	~~[[Category: Psi-2]]~~
	~~[[Category: Structural genomic~~]]
	[[Category: Transferase]]		[[Category: Transferase]]
	[[Category: Y767_haein]]		[[Category: Y767_haein]]

OCA at 08:20, 30 September 2014

2014-09-30T08:20:58Z

← Older revision		Revision as of 08:20, 30 September 2014
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	~~[[Image:2ift.png\|left\|200px]]~~		==Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.==
			<StructureSection load='2ift' size='340' side='right' caption='[[2ift]], [[Resolution\|resolution]] 2.30Å' scene=''>
	~~{{STRUCTURE_2ift\| PDB=2ift \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[2ift]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2IFT FirstGlance]. <br>
	===Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.===		</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
			<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HI0767 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 Haemophilus influenzae])</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ift FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ift OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ift RCSB], [http://www.ebi.ac.uk/pdbsum/2ift PDBsum], [http://www.topsan.org/Proteins/NESGC/2ift TOPSAN]</span></td></tr>
	==~~About this Structure~~==		<table>
	[[2ift]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA].		== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/2ift_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			__TOC__
			</StructureSection>
	[[Category: Haemophilus influenzae]]		[[Category: Haemophilus influenzae]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]

OCA: Protected "2ift" [edit=sysop:move=sysop]

2013-01-07T13:23:24Z

Protected "2ift" [edit=sysop:move=sysop]

← Older revision	Revision as of 13:23, 7 January 2013
(No difference)

OCA at 13:23, 7 January 2013

2013-01-07T13:23:23Z

← Older revision		Revision as of 13:23, 7 January 2013
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	~~{{Seed}}~~
	[[Image:2ift.png\|left\|200px]]		[[Image:2ift.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2ift", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2ift\| PDB=2ift \| SCENE= }}		{{STRUCTURE_2ift\| PDB=2ift \| SCENE= }}

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	==About this Structure==		==About this Structure==
	~~2IFT~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA].		[[2ift]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA].
	[[Category: Haemophilus influenzae]]		[[Category: Haemophilus influenzae]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
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	[[Category: Psi-2]]		[[Category: Psi-2]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
			[[Category: Transferase]]
	[[Category: Y767_haein]]		[[Category: Y767_haein]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:46:26 2008''~~

OCA at 13:46, 16 November 2008

2008-11-16T13:46:28Z

← Older revision		Revision as of 13:46, 16 November 2008
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	==About this Structure==		==About this Structure==
	2IFT is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA].		2IFT is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFT OCA].
	[[Category: Haemophilus influenzae]]		[[Category: Haemophilus influenzae]]
	~~[[Category: Single protein]]~~
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
	[[Category: Cunningham, K.]]		[[Category: Cunningham, K.]]
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	[[Category: Y767_haein]]		[[Category: Y767_haein]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Sep 29 00~~:54:59 2008''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:46:26 2008''