2ott - Revision history

OCA at 08:25, 30 October 2024

2024-10-30T08:25:45Z

← Older revision		Revision as of 08:25, 30 October 2024
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	<StructureSection load='2ott' size='340' side='right'caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2ott' size='340' side='right'caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Human Human~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OTT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OTT FirstGlance]. <br>
	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[2ja4\|2ja4]]</div></td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">CD5, LEU1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax~~.~~cgi?mode=Info&srchmode=~~5&~~id=9606 HUMAN])~~</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [https://pdbe.org/2ott PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [https://www.ebi.ac.uk/pdbsum/2ott PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ott ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [https://pdbe.org/2ott PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [https://www.ebi.ac.uk/pdbsum/2ott PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ott ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/CD5_HUMAN CD5_HUMAN]] May act as a receptor in regulating T-cell proliferation.		[https://www.uniprot.org/uniprot/CD5_HUMAN CD5_HUMAN] May act as a receptor in regulating T-cell proliferation.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/2ott_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/2ott_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Human~~]]		[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Rodamilans, B]]		[[Category: Rodamilans B]]
	~~[[Category: Immune system]]~~
	~~[[Category: Srcr group b domain~~]]

OCA at 10:34, 31 March 2021

2021-03-31T10:34:53Z

← Older revision		Revision as of 10:34, 31 March 2021
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	==Crystal structure of CD5_DIII==		==Crystal structure of CD5_DIII==
	<StructureSection load='2ott' size='340' side='right' caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2ott' size='340' side='right'caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2OTT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OTT FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ja4\|2ja4]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2ja4\|2ja4]]</div></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [~~http~~://pdbe.org/2ott PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ott PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ott ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [https://pdbe.org/2ott PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [https://www.ebi.ac.uk/pdbsum/2ott PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ott ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/CD5_HUMAN CD5_HUMAN]] May act as a receptor in regulating T-cell proliferation.		[[https://www.uniprot.org/uniprot/CD5_HUMAN CD5_HUMAN]] May act as a receptor in regulating T-cell proliferation.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/2ott_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/2ott_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
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	</StructureSection>		</StructureSection>
	[[Category: Human]]		[[Category: Human]]
			[[Category: Large Structures]]
	[[Category: Rodamilans, B]]		[[Category: Rodamilans, B]]
	[[Category: Immune system]]		[[Category: Immune system]]
	[[Category: Srcr group b domain]]		[[Category: Srcr group b domain]]

OCA at 09:08, 18 October 2017

2017-10-18T09:08:57Z

← Older revision		Revision as of 09:08, 18 October 2017
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	==Crystal structure of CD5_DIII==		==Crystal structure of CD5_DIII==
	<StructureSection load='2ott' size='340' side='right' caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2ott' size='340' side='right' caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>
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	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ja4\|2ja4]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ja4\|2ja4]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [http://pdbe.org/2ott PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [http://www.ebi.ac.uk/pdbsum/2ott PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [http://pdbe.org/2ott PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [http://www.ebi.ac.uk/pdbsum/2ott PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ott ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ott ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 22:42, 11 September 2015

2015-09-11T22:42:43Z

← Older revision		Revision as of 22:42, 11 September 2015
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	<StructureSection load='2ott' size='340' side='right' caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2ott' size='340' side='right' caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Homo_sapiens Homo sapiens~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OTT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OTT FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ja4\|2ja4]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ja4\|2ja4]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 ~~Homo sapiens~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [http://www.ebi.ac.uk/pdbsum/2ott PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [http://pdbe.org/2ott PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [http://www.ebi.ac.uk/pdbsum/2ott PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 2ott" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Homo sapiens~~]]		[[Category: Human]]
	[[Category: Rodamilans, B]]		[[Category: Rodamilans, B]]
	[[Category: Immune system]]		[[Category: Immune system]]
	[[Category: Srcr group b domain]]		[[Category: Srcr group b domain]]

OCA at 20:25, 25 December 2014

2014-12-25T20:25:23Z

← Older revision		Revision as of 20:25, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OTT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OTT FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ja4\|2ja4]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ja4\|2ja4]]</td></tr>
	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [http://www.ebi.ac.uk/pdbsum/2ott PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [http://www.ebi.ac.uk/pdbsum/2ott PDBsum]</span></td></tr>
	<table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/CD5_HUMAN CD5_HUMAN]] May act as a receptor in regulating T-cell proliferation.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Rodamilans, B.]]		[[Category: Rodamilans, B]]
	[[Category: Immune system]]		[[Category: Immune system]]
	[[Category: Srcr group b domain]]		[[Category: Srcr group b domain]]

OCA at 19:45, 30 September 2014

2014-09-30T19:45:09Z

← Older revision		Revision as of 19:45, 30 September 2014
Line 1:		Line 1:
	[[Image:~~2ott~~.~~png~~\|~~left~~\|~~200px~~]]		==Crystal structure of CD5_DIII==
			<StructureSection load='2ott' size='340' side='right' caption='[[2ott]], [[Resolution\|resolution]] 2.50Å' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[2ott]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OTT FirstGlance]. <br>
			</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ja4\|2ja4]]</td></tr>
			<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CD5, LEU1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ott FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ott OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ott RCSB], [http://www.ebi.ac.uk/pdbsum/2ott PDBsum]</span></td></tr>
			<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ot/2ott_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Scavenger receptor cysteine-rich (SRCR) domains are ancient protein modules widely found among cell surface and secreted proteins of the innate and adaptive immune system, where they mediate ligand binding. We have solved the crystal structure at 2.2 A of resolution of the SRCR CD5 domain III, a human lymphocyte receptor involved in the modulation of antigen specific receptor-mediated T cell activation and differentiation signals. The first structure of a member of a group B SRCR domain reveals the fold of this ancient protein module into a central core formed by two antiparallel beta-sheets and one alpha-helix, illustrating the conserved core at the protein level of genes coding for group A and B members of the SRCR superfamily. The novel SRCR group B structure permits the interpretation of site-directed mutagenesis data on the binding of activated leukocyte cell adhesion molecule (ALCAM/CD166) binding to CD6, a closely related lymphocyte receptor homologue to CD5.

	~~{{STRUCTURE_2ott\| PDB=2ott \| SCENE= }}~~		Crystal structure of the third extracellular domain of CD5 reveals the fold of a group B scavenger cysteine-rich receptor domain.,Rodamilans B, Munoz IG, Bragado-Nilsson E, Sarrias MR, Padilla O, Blanco FJ, Lozano F, Montoya G J Biol Chem. 2007 Apr 27;282(17):12669-77. Epub 2007 Feb 23. PMID:17322294<ref>PMID:17322294</ref>

	~~===Crystal structure~~ of ~~CD5_DIII===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
	~~{{ABSTRACT_PUBMED_17322294}}~~		== References ==
			<references/>
	~~==About this Structure==~~		__TOC__
	~~[[2ott]] is a 2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Homo_sapiens Homo sapiens]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA].~~		</StructureSection>

	==~~Reference~~==
	<~~ref group="xtra">PMID:017322294<~~/~~ref~~><~~references group="xtra"~~/>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Rodamilans, B.]]		[[Category: Rodamilans, B.]]
	[[Category: Immune system]]		[[Category: Immune system]]
	[[Category: Srcr group b domain]]		[[Category: Srcr group b domain]]

OCA: Protected "2ott" [edit=sysop:move=sysop]

2013-01-07T12:08:27Z

Protected "2ott" [edit=sysop:move=sysop]

← Older revision	Revision as of 12:08, 7 January 2013
(No difference)

OCA at 12:08, 7 January 2013

2013-01-07T12:08:25Z

← Older revision		Revision as of 12:08, 7 January 2013
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	~~{{Seed}}~~
	[[Image:2ott.png\|left\|200px]]		[[Image:2ott.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2ott", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2ott\| PDB=2ott \| SCENE= }}		{{STRUCTURE_2ott\| PDB=2ott \| SCENE= }}

	===Crystal structure of CD5_DIII===		===Crystal structure of CD5_DIII===


	~~<!--~~
	~~The line below this paragraph, {{ABSTRACT_PUBMED_17322294}}, adds the Publication Abstract to the page~~
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	~~-->~~
	{{ABSTRACT_PUBMED_17322294}}		{{ABSTRACT_PUBMED_17322294}}

	==About this Structure==		==About this Structure==
	~~2OTT~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA].		[[2ott]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA].

	==Reference==		==Reference==
	<ref group="xtra">PMID:~~17322294~~</ref><references group="xtra"/>		<ref group="xtra">PMID:017322294</ref><references group="xtra"/>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Rodamilans, B.]]		[[Category: Rodamilans, B.]]
	[[Category: Immune system]]		[[Category: Immune system]]
	[[Category: Srcr group b domain]]		[[Category: Srcr group b domain]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Apr 19 08:49:22 2009''~~

OCA at 05:49, 19 April 2009

2009-04-19T05:49:23Z

← Older revision		Revision as of 05:49, 19 April 2009
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	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Rodamilans, B.]]		[[Category: Rodamilans, B.]]
			[[Category: Immune system]]
	[[Category: Srcr group b domain]]		[[Category: Srcr group b domain]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Feb 18 06~~:10:17 2009''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Apr 19 08:49:22 2009''

OCA at 04:10, 18 February 2009

2009-02-18T04:10:19Z

← Older revision		Revision as of 04:10, 18 February 2009
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	==About this Structure==		==About this Structure==
	2OTT is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA].		2OTT is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OTT OCA].

	==Reference==		==Reference==
	~~Crystal structure of the third extracellular domain of CD5 reveals the fold of a~~ group B scavenger cysteine-rich receptor domain., Rodamilans B, Munoz IG, Bragado-Nilsson E, Sarrias MR, Padilla O, Blanco FJ, Lozano F, Montoya G, J Biol Chem. 2007 Apr 27;282(17):12669-77. Epub 2007 Feb 23. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/17322294 17322294]~~		<ref group="xtra">PMID:17322294</ref><references group="xtra"/>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	~~[[Category: Single protein]]~~
	[[Category: Rodamilans, B.]]		[[Category: Rodamilans, B.]]
	[[Category: Srcr group b domain]]		[[Category: Srcr group b domain]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Tue Jul 29 12~~:52:~~38 2008~~''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 06:10:17 2009''