2pcv - Revision history

OCA at 12:53, 20 December 2023

2023-12-20T12:53:38Z

← Older revision		Revision as of 12:53, 20 December 2023
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	==Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA==		==Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA==
	<StructureSection load='2pcv' size='340' side='right'caption='[[2pcv~~]], [[NMR_Ensembles_of_Models \| 10 NMR models~~]]' scene=''>		<StructureSection load='2pcv' size='340' side='right'caption='[[2pcv]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCV FirstGlance]. <br>
	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style~~=~~'overflow: auto; max-height: 3em;'>[[2pcw\|2pcw]]</div~~></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [https://pdbe.org/2pcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [https://www.ebi.ac.uk/pdbsum/2pcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcv ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [https://pdbe.org/2pcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [https://www.ebi.ac.uk/pdbsum/2pcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcv ProSAT]</span></td></tr>
	</table>		</table>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Jin, H]]		[[Category: Jin H]]
	[[Category: Loria~~, J P~~]]		[[Category: Loria JP]]
	[[Category: Moore~~, P B]]~~		[[Category: Moore PB]]
	~~[[Category: Box h/aca snorna]]~~
	~~[[Category: Pseudouridylation]]~~
	~~[[Category: Rna]]~~
	~~[[Category: Rrna~~]]

OCA at 07:44, 9 March 2022

2022-03-09T07:44:47Z

← Older revision		Revision as of 07:44, 9 March 2022
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	<StructureSection load='2pcv' size='340' side='right'caption='[[2pcv]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>		<StructureSection load='2pcv' size='340' side='right'caption='[[2pcv]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2PCV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCV FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pcw\|2pcw]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2pcw\|2pcw]]</div></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [~~http~~://pdbe.org/2pcv PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2pcv PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcv ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [https://pdbe.org/2pcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [https://www.ebi.ac.uk/pdbsum/2pcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcv ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 06:54, 3 June 2020

2020-06-03T06:54:16Z

← Older revision		Revision as of 06:54, 3 June 2020
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	==Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA==		==Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA==
	<StructureSection load='2pcv' size='340' side='right' caption='[[2pcv]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>		<StructureSection load='2pcv' size='340' side='right'caption='[[2pcv]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2PCV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2PCV FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pcw\|2pcw]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pcw\|2pcw]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [http://pdbe.org/2pcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [http://www.ebi.ac.uk/pdbsum/2pcv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcv ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [http://pdbe.org/2pcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [http://www.ebi.ac.uk/pdbsum/2pcv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcv ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Large Structures]]
	[[Category: Jin, H]]		[[Category: Jin, H]]
	[[Category: Loria, J P]]		[[Category: Loria, J P]]

OCA at 09:02, 29 August 2018

2018-08-29T09:02:45Z

← Older revision		Revision as of 09:02, 29 August 2018
Line 1:		Line 1:

	==Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA==		==Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA==
	<StructureSection load='2pcv' size='340' side='right' caption='[[2pcv]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>		<StructureSection load='2pcv' size='340' side='right' caption='[[2pcv]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>
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	<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCV FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pcw\|2pcw]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pcw\|2pcw]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [http://pdbe.org/2pcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [http://www.ebi.ac.uk/pdbsum/2pcv PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [http://pdbe.org/2pcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [http://www.ebi.ac.uk/pdbsum/2pcv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcv ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 00:44, 11 September 2015

2015-09-11T00:44:03Z

← Older revision		Revision as of 00:44, 11 September 2015
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	<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCV FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pcw\|2pcw]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pcw\|2pcw]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [http://www.ebi.ac.uk/pdbsum/2pcv PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [http://pdbe.org/2pcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [http://www.ebi.ac.uk/pdbsum/2pcv PDBsum]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 2pcv" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 06:51, 22 January 2015

2015-01-22T06:51:27Z

← Older revision		Revision as of 06:51, 22 January 2015
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Jin, H.]]		[[Category: Jin, H]]
	[[Category: Loria, J P.]]		[[Category: Loria, J P]]
	[[Category: Moore, P B.]]		[[Category: Moore, P B]]
	[[Category: Box h/aca snorna]]		[[Category: Box h/aca snorna]]
	[[Category: Pseudouridylation]]		[[Category: Pseudouridylation]]
	[[Category: Rna]]		[[Category: Rna]]
	[[Category: Rrna]]		[[Category: Rrna]]

OCA at 11:34, 20 October 2014

2014-10-20T11:34:51Z

← Older revision		Revision as of 11:34, 20 October 2014
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	[[~~Image~~:~~2pcv~~.~~png~~\|~~left~~\|~~200px~~]]		==Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA==
			<StructureSection load='2pcv' size='340' side='right' caption='[[2pcv]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCV FirstGlance]. <br>
			</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pcw\|2pcw]]</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pcv RCSB], [http://www.ebi.ac.uk/pdbsum/2pcv PDBsum]</span></td></tr>
			</table>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Base pairing between the RNA components of box H/ACA small nucleolar ribonucleoproteins (snoRNPs) and sequences in other eukaryotic RNAs target specific uridines for pseudouridylation. An RNA called HJ1 has been developed that interacts with the rRNA sequence targeted by the 5' pseudouridylation pocket of human U65 snoRNA the same way as intact U65 snoRNA. Sequences on both strands of the analog of the U65 snoRNP pseudouridylation pocket in HJ1 pair with its substrate sequence, and the resulting complex, called HJ3, is strongly stabilized by Mg(2+). The solution structure of HJ3 reveals an Omega-shaped RNA interaction motif that has not previously been described, which is likely to be common to all box H/ACA snoRNP-substrate complexes. The topology of the complex explains why the access of substrate sequences to snoRNPs is facile and how uridine selection may occur when these complexes form.

	~~{{STRUCTURE_2pcv\| PDB=2pcv \| SCENE= }}~~		Solution structure of an rRNA substrate bound to the pseudouridylation pocket of a box H/ACA snoRNA.,Jin H, Loria JP, Moore PB Mol Cell. 2007 Apr 27;26(2):205-15. PMID:17466623<ref>PMID:17466623</ref>

	~~===Solution Structure~~ of ~~an rRNA Substrate Bound to~~ the ~~Pseudouridylation Pocket~~ of ~~a Box H~~/~~ACA snoRNA===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
	~~{{ABSTRACT_PUBMED_17466623}}~~		== References ==
			<references/>
	==~~About this Structure~~==		__TOC__
	~~[[2pcv]] is a 1 chain structure. Full experimental information is available from [http:~~//~~oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA].~~		</StructureSection>
	[[Category: Jin, H.]]		[[Category: Jin, H.]]
	[[Category: Loria, J P.]]		[[Category: Loria, J P.]]

OCA: Protected "2pcv" [edit=sysop:move=sysop]

2013-01-07T12:09:42Z

Protected "2pcv" [edit=sysop:move=sysop]

← Older revision	Revision as of 12:09, 7 January 2013
(No difference)

OCA at 12:09, 7 January 2013

2013-01-07T12:09:38Z

← Older revision		Revision as of 12:09, 7 January 2013
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	~~{{Seed}}~~
	[[Image:2pcv.png\|left\|200px]]		[[Image:2pcv.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2pcv", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2pcv\| PDB=2pcv \| SCENE= }}		{{STRUCTURE_2pcv\| PDB=2pcv \| SCENE= }}

	===Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA===		===Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA===

			{{ABSTRACT_PUBMED_17466623}}

	==About this Structure==		==About this Structure==
	~~2PCV~~ is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA].		[[2pcv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA].
	[[Category: Jin, H.]]		[[Category: Jin, H.]]
	[[Category: Loria, J P.]]		[[Category: Loria, J P.]]
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	[[Category: Box h/aca snorna]]		[[Category: Box h/aca snorna]]
	[[Category: Pseudouridylation]]		[[Category: Pseudouridylation]]
			[[Category: Rna]]
	[[Category: Rrna]]		[[Category: Rrna]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 22 11:38:35 2009''~~

OCA at 09:38, 22 March 2009

2009-03-22T09:38:35Z

← Older revision		Revision as of 09:38, 22 March 2009
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	[[Image:2pcv.~~gif~~\|left\|200px]]		{{Seed}}
			[[Image:2pcv.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_2pcv\| PDB=2pcv \| SCENE= }}		{{STRUCTURE_2pcv\| PDB=2pcv \| SCENE= }}

	~~'''~~Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA~~'''~~		===Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA===


	==About this Structure==		==About this Structure==
	Full ~~crystallographic~~ information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA].		2PCV is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCV OCA].
	[[Category: Jin, H.]]		[[Category: Jin, H.]]
	[[Category: Loria, J P.]]		[[Category: Loria, J P.]]
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	[[Category: Pseudouridylation]]		[[Category: Pseudouridylation]]
	[[Category: Rrna]]		[[Category: Rrna]]
	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~May 4 12~~:52:~~30 2008~~''
			''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 22 11:38:35 2009''