2uum - Revision history

OCA at 05:30, 17 October 2024

2024-10-17T05:30:57Z

← Older revision		Revision as of 05:30, 17 October 2024
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uu/2uum_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uu/2uum_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>

OCA at 14:55, 13 December 2023

2023-12-13T14:55:09Z

← Older revision		Revision as of 14:55, 13 December 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UUM FirstGlance]. <br>		<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UUM FirstGlance]. <br>
	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>~~, ~~<scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>~~</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3Å</td></tr>
	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height~~: ~~3em;~~'>~~[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]~~</~~div~~></td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [https://pdbe.org/2uum PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [https://www.ebi.ac.uk/pdbsum/2uum PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uum ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [https://pdbe.org/2uum PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [https://www.ebi.ac.uk/pdbsum/2uum PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uum ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/PHCA_ARTPT PHCA_ARTPT~~]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[https://www.uniprot.org/uniprot/PHCB_ARTPT PHCB_ARTPT]~~] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.		[https://www.uniprot.org/uniprot/PHCA_ARTPT PHCA_ARTPT] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Spirulina sp]]		[[Category: Spirulina sp]]
	[[Category: Ghosh, P K]]		[[Category: K Ghosh P]]
	[[Category: Mishra, S]]		[[Category: Mishra S]]
	[[Category: Patel, A]]		[[Category: Patel A]]
	[[Category: Satyanarayana, L]]		[[Category: Satyanarayana L]]
	[[Category: Suresh~~, C G]]~~		[[Category: Suresh CG]]
	~~[[Category: Bile pigment]]~~
	~~[[Category: C-phycocyanin]]~~
	~~[[Category: Chromophore]]~~
	~~[[Category: Electron transport]]~~
	~~[[Category: Fresh water]]~~
	~~[[Category: Lyngbya sp]]~~
	~~[[Category: Marine]]~~
	~~[[Category: Methylation]]~~
	~~[[Category: Phormidium]]~~
	~~[[Category: Photosynthesis]]~~
	~~[[Category: Phycobilisome]]~~
	~~[[Category: Transport~~]]

OCA at 12:29, 23 March 2022

2022-03-23T12:29:44Z

← Older revision		Revision as of 12:29, 23 March 2022
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	<StructureSection load='2uum' size='340' side='right'caption='[[2uum]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='2uum' size='340' side='right'caption='[[2uum]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2UUM FirstGlance]. <br>		<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UUM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</div></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [~~http~~://pdbe.org/2uum PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2uum PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2uum ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [https://pdbe.org/2uum PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [https://www.ebi.ac.uk/pdbsum/2uum PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uum ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/PHCA_ARTPT PHCA_ARTPT]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[~~http~~://www.uniprot.org/uniprot/PHCB_ARTPT PHCB_ARTPT]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.		[[https://www.uniprot.org/uniprot/PHCA_ARTPT PHCA_ARTPT]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[https://www.uniprot.org/uniprot/PHCB_ARTPT PHCB_ARTPT]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 11:09, 17 June 2020

2020-06-17T11:09:50Z

← Older revision		Revision as of 11:09, 17 June 2020
Line 1:		Line 1:

	==Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers.==		==Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers.==
	<StructureSection load='2uum' size='340' side='right' caption='[[2uum]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='2uum' size='340' side='right'caption='[[2uum]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2UUM FirstGlance]. <br>		<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2UUM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://pdbe.org/2uum PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2uum ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://pdbe.org/2uum PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2uum ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Large Structures]]
	[[Category: Spirulina sp]]		[[Category: Spirulina sp]]
	[[Category: Ghosh, P K]]		[[Category: Ghosh, P K]]

OCA at 08:27, 12 September 2018

2018-09-12T08:27:43Z

← Older revision		Revision as of 08:27, 12 September 2018
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	==~~CRYSTAL STRUCTURE OF~~ C-~~PHYCOCYANIN FROM PHORMIDIUM~~, ~~LYNGBYA SPP~~. (~~MARINE~~) ~~AND SPIRULINA SP~~. (~~FRESH WATER~~) ~~SHOWS TWO DIFFERENT WAYS OF ENERGY TRANSFER BETWEEN TWO HEXAMERS~~.==
			==Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers.==
	<StructureSection load='2uum' size='340' side='right' caption='[[2uum]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='2uum' size='340' side='right' caption='[[2uum]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://pdbe.org/2uum PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://pdbe.org/2uum PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2uum ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uu/2uum_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uu/2uum_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 19:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uum ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uum ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

			==See Also==
			*[[Phycocyanin\|Phycocyanin]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 16:45, 7 February 2016

2016-02-07T16:45:07Z

← Older revision		Revision as of 16:45, 7 February 2016
Line 5:		Line 5:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://pdbe.org/2uum PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/~~PHCA_SPIPL PHCA_SPIPL~~]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[http://www.uniprot.org/uniprot/~~PHCB_SPIPL PHCB_SPIPL~~]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.		[[http://www.uniprot.org/uniprot/PHCA_ARTPT PHCA_ARTPT]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[http://www.uniprot.org/uniprot/PHCB_ARTPT PHCB_ARTPT]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uum ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 16:47, 24 December 2014

2014-12-24T16:47:40Z

← Older revision		Revision as of 16:47, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2UUM FirstGlance]. <br>		<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2UUM FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene><br>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum]</span></td></tr>
	<table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/PHCA_SPIPL PHCA_SPIPL]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[http://www.uniprot.org/uniprot/PHCB_SPIPL PHCB_SPIPL]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Spirulina sp.]]		[[Category: Spirulina sp]]
	[[Category: Ghosh, P K.]]		[[Category: Ghosh, P K]]
	[[Category: Mishra, S.]]		[[Category: Mishra, S]]
	[[Category: Patel, A.]]		[[Category: Patel, A]]
	[[Category: Satyanarayana, L.]]		[[Category: Satyanarayana, L]]
	[[Category: Suresh, C G.]]		[[Category: Suresh, C G]]
	[[Category: Bile pigment]]		[[Category: Bile pigment]]
	[[Category: C-phycocyanin]]		[[Category: C-phycocyanin]]
Line 36:		Line 38:
	[[Category: Photosynthesis]]		[[Category: Photosynthesis]]
	[[Category: Phycobilisome]]		[[Category: Phycobilisome]]
	~~[[Category: Spirulina sp]]~~
	[[Category: Transport]]		[[Category: Transport]]

OCA at 01:59, 1 October 2014

2014-10-01T01:59:25Z

← Older revision		Revision as of 01:59, 1 October 2014
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	~~[[Image:2uum.png\|left\|200px]]~~		==CRYSTAL STRUCTURE OF C-PHYCOCYANIN FROM PHORMIDIUM, LYNGBYA SPP. (MARINE) AND SPIRULINA SP. (FRESH WATER) SHOWS TWO DIFFERENT WAYS OF ENERGY TRANSFER BETWEEN TWO HEXAMERS.==
			<StructureSection load='2uum' size='340' side='right' caption='[[2uum]], [[Resolution\|resolution]] 3.00Å' scene=''>
	~~{{STRUCTURE_2uum\| PDB=2uum \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[2uum]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2UUM FirstGlance]. <br>
	===CRYSTAL STRUCTURE OF C-PHYCOCYANIN FROM PHORMIDIUM, LYNGBYA SPP. (MARINE) AND SPIRULINA SP. (FRESH WATER) SHOWS TWO DIFFERENT WAYS OF ENERGY TRANSFER BETWEEN TWO HEXAMERS.===		</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene><br>
			<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1gh0\|1gh0]], [[2uul\|2uul]], [[2uun\|2uun]]</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2uum FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uum OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2uum RCSB], [http://www.ebi.ac.uk/pdbsum/2uum PDBsum]</span></td></tr>
	==~~About this Structure~~==		<table>
	[[2uum]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA].		== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uu/2uum_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			__TOC__
			</StructureSection>
	[[Category: Spirulina sp.]]		[[Category: Spirulina sp.]]
	[[Category: Ghosh, P K.]]		[[Category: Ghosh, P K.]]

OCA: Protected "2uum" [edit=sysop:move=sysop]

2013-01-07T22:54:38Z

Protected "2uum" [edit=sysop:move=sysop]

← Older revision	Revision as of 22:54, 7 January 2013
(No difference)

OCA at 22:54, 7 January 2013

2013-01-07T22:54:35Z

← Older revision		Revision as of 22:54, 7 January 2013
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	~~{{Seed}}~~
	[[Image:2uum.png\|left\|200px]]		[[Image:2uum.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2uum", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2uum\| PDB=2uum \| SCENE= }}		{{STRUCTURE_2uum\| PDB=2uum \| SCENE= }}

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	==About this Structure==		==About this Structure==
	~~2UUM~~ is a 24 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA].		[[2uum]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Spirulina_sp. Spirulina sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UUM OCA].
	[[Category: Spirulina sp.]]		[[Category: Spirulina sp.]]
	[[Category: Ghosh, P K.]]		[[Category: Ghosh, P K.]]
Line 34:		Line 27:
	[[Category: Spirulina sp]]		[[Category: Spirulina sp]]
	[[Category: Transport]]		[[Category: Transport]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:12:33 2009''~~