2w4e - Revision history

OCA at 10:07, 9 May 2024

2024-05-09T10:07:42Z

← Older revision		Revision as of 10:07, 9 May 2024
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	<StructureSection load='2w4e' size='340' side='right'caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2w4e' size='340' side='right'caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Deira Deira~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W4E FirstGlance]. <br>		<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W4E FirstGlance]. <br>
	</td></tr><tr id='~~activity~~'><td class="sblockLbl"><b>~~Activity~~:</b></td><td class="sblockDat"~~><span class~~=~~'plainlinks'~~>~~[https://en.wikipedia.org/wiki/ADP~~-~~ribose_diphosphatase ADP-ribose diphosphatase]~~, ~~with EC number~~ [~~https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13~~] ~~</span>~~</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [https://pdbe.org/2w4e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [https://www.ebi.ac.uk/pdbsum/2w4e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4e ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [https://pdbe.org/2w4e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [https://www.ebi.ac.uk/pdbsum/2w4e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4e ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/Q9RSC1_DEIRA Q9RSC1_DEIRA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~ADP-ribose diphosphatase]]~~		[[Category: Deinococcus radiodurans R1]]
	~~[[Category: Deira~~]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Fioravanti, E]]		[[Category: Fioravanti E]]
	[[Category: Goncalves~~, A M.D~~]]		[[Category: Goncalves AMD]]
	[[Category: McSweeney, S]]		[[Category: McSweeney S]]
	[[Category: Stelter, M]]		[[Category: Stelter M]]
	~~[[Category: Adp-ribose pyrophosphatase]]~~
	~~[[Category: Hydrolase~~]]

OCA at 11:52, 30 March 2022

2022-03-30T11:52:44Z

← Older revision		Revision as of 11:52, 30 March 2022
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	<StructureSection load='2w4e' size='340' side='right'caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2w4e' size='340' side='right'caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2W4E FirstGlance]. <br>		<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W4E FirstGlance]. <br>
	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [~~http~~://pdbe.org/2w4e PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2w4e PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4e ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [https://pdbe.org/2w4e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [https://www.ebi.ac.uk/pdbsum/2w4e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4e ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 08:55, 25 June 2020

2020-06-25T08:55:42Z

← Older revision		Revision as of 08:55, 25 June 2020
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	==Structure of an N-terminally truncated Nudix hydrolase DR2204 from Deinococcus radiodurans==		==Structure of an N-terminally truncated Nudix hydrolase DR2204 from Deinococcus radiodurans==
	<StructureSection load='2w4e' size='340' side='right' caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2w4e' size='340' side='right'caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2W4E FirstGlance]. <br>		<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2W4E FirstGlance]. <br>
	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://pdbe.org/2w4e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4e ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://pdbe.org/2w4e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4e ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	==See Also==		==See Also==
	*[[ADP-ribose pyrophosphatase\|ADP-ribose pyrophosphatase]]		*[[ADP-ribose pyrophosphatase 3D structures\|ADP-ribose pyrophosphatase 3D structures]]
			*[[Nudix hydrolase 3D structures\|Nudix hydrolase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
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	[[Category: ADP-ribose diphosphatase]]		[[Category: ADP-ribose diphosphatase]]
	[[Category: Deira]]		[[Category: Deira]]
			[[Category: Large Structures]]
	[[Category: Fioravanti, E]]		[[Category: Fioravanti, E]]
	[[Category: Goncalves, A M.D]]		[[Category: Goncalves, A M.D]]

OCA at 21:27, 19 September 2018

2018-09-19T21:27:19Z

← Older revision		Revision as of 21:27, 19 September 2018
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	==~~STRUCTURE OF AN~~ N-~~TERMINALLY TRUNCATED NUDIX HYDROLASE~~ DR2204 ~~FROM DEINOCOCCUS RADIODURANS~~==
			==Structure of an N-terminally truncated Nudix hydrolase DR2204 from Deinococcus radiodurans==
	<StructureSection load='2w4e' size='340' side='right' caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2w4e' size='340' side='right' caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W4E FirstGlance]. <br>		<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W4E FirstGlance]. <br>
	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://pdbe.org/2w4e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://pdbe.org/2w4e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4e ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w4/2w4e_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w4/2w4e_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
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	[[Category: Fioravanti, E]]		[[Category: Fioravanti, E]]
	[[Category: Goncalves, A M.D]]		[[Category: Goncalves, A M.D]]
	[[Category: ~~Mcsweeney~~, S]]		[[Category: McSweeney, S]]
	[[Category: Stelter, M]]		[[Category: Stelter, M]]
	[[Category: Adp-ribose pyrophosphatase]]		[[Category: Adp-ribose pyrophosphatase]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 07:01, 9 February 2016

2016-02-09T07:01:55Z

← Older revision		Revision as of 07:01, 9 February 2016
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	<StructureSection load='2w4e' size='340' side='right' caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2w4e' size='340' side='right' caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Deinococcus_radiodurans Deinococcus radiodurans~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W4E FirstGlance]. <br>		<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W4E FirstGlance]. <br>
	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://pdbe.org/2w4e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w4e ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 2w4e" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
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	</StructureSection>		</StructureSection>
	[[Category: ADP-ribose diphosphatase]]		[[Category: ADP-ribose diphosphatase]]
	[[Category: ~~Deinococcus radiodurans~~]]		[[Category: Deira]]
	[[Category: Fioravanti, E]]		[[Category: Fioravanti, E]]
	[[Category: Goncalves, A M.D]]		[[Category: Goncalves, A M.D]]

OCA at 14:34, 19 January 2015

2015-01-19T14:34:29Z

← Older revision		Revision as of 14:34, 19 January 2015
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W4E FirstGlance]. <br>		<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W4E FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	[[Category: ADP-ribose diphosphatase]]		[[Category: ADP-ribose diphosphatase]]
	[[Category: Deinococcus radiodurans]]		[[Category: Deinococcus radiodurans]]
	[[Category: Fioravanti, E.]]		[[Category: Fioravanti, E]]
	[[Category: Goncalves, A M.D.]]		[[Category: Goncalves, A M.D]]
	[[Category: Mcsweeney, S.]]		[[Category: Mcsweeney, S]]
	[[Category: Stelter, M.]]		[[Category: Stelter, M]]
	[[Category: Adp-ribose pyrophosphatase]]		[[Category: Adp-ribose pyrophosphatase]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 07:12, 29 September 2014

2014-09-29T07:12:40Z

← Older revision		Revision as of 07:12, 29 September 2014
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	[[Image:~~2w4e~~.~~png~~\|~~left~~\|~~200px~~]]		==STRUCTURE OF AN N-TERMINALLY TRUNCATED NUDIX HYDROLASE DR2204 FROM DEINOCOCCUS RADIODURANS==
			<StructureSection load='2w4e' size='340' side='right' caption='[[2w4e]], [[Resolution\|resolution]] 2.00Å' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W4E FirstGlance]. <br>
			</td></tr><tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ADP-ribose_diphosphatase ADP-ribose diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.13 3.6.1.13] </span></td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2w4e RCSB], [http://www.ebi.ac.uk/pdbsum/2w4e PDBsum]</span></td></tr>
			<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w4/2w4e_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Nudix pyrophosphatases are a well represented protein family in the Deinococcus radiodurans genome. These hydrolases, which are known to be enzymatically active towards nucleoside diphosphate derivatives, play a role in cleansing the cell pool of potentially deleterious damage products. Here, the structure of DR2204, the only ADP-ribose pyrophosphatase in the D. radiodurans genome that is known to be active towards flavin adenosine dinucleotide (FAD), is presented at 2.0 angstrom resolution.

	~~{{STRUCTURE_2w4e\| PDB=2w4e \| SCENE= }}~~		Structure of an N-terminally truncated Nudix hydrolase DR2204 from Deinococcus radiodurans.,Goncalves AM, Fioravanti E, Stelter M, McSweeney S Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Nov 1;65(Pt, 11):1083-7. Epub 2009 Oct 13. PMID:19923723<ref>PMID:19923723</ref>

	~~===STRUCTURE OF AN N-TERMINALLY TRUNCATED NUDIX HYDROLASE DR2204 FROM DEINOCOCCUS RADIODURANS===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
	~~{{ABSTRACT_PUBMED_19923723}}~~

	~~==About this Structure==~~
	~~[[2w4e]] is~~ a ~~2 chain structure with sequence from [http://en.wikipedia~~.~~org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]~~. ~~Full crystallographic information is available from [http://oca~~.~~weizmann.ac.il/oca-bin~~/~~ocashort?id=2W4E OCA].~~

	==See Also==		==See Also==
	*[[ADP-ribose pyrophosphatase\|ADP-ribose pyrophosphatase]]		*[[ADP-ribose pyrophosphatase\|ADP-ribose pyrophosphatase]]
			== References ==
	==~~Reference~~==		<references/>
	<~~ref group="xtra">PMID:019923723<~~/~~ref~~><~~references group="xtra"~~/>		__TOC__
			</StructureSection>
	[[Category: ADP-ribose diphosphatase]]		[[Category: ADP-ribose diphosphatase]]
	[[Category: Deinococcus radiodurans]]		[[Category: Deinococcus radiodurans]]

OCA at 13:03, 20 October 2012

2012-10-20T13:03:04Z

← Older revision		Revision as of 13:03, 20 October 2012
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	==About this Structure==		==About this Structure==
	[[2w4e]] is a 2 chain structure ~~of [[ADP-ribose pyrophosphatase]]~~ with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA].		[[2w4e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA].

	==See Also==		==See Also==

OCA: Protected "2w4e" [edit=sysop:move=sysop]

2012-07-26T10:45:26Z

Protected "2w4e" [edit=sysop:move=sysop]

← Older revision	Revision as of 10:45, 26 July 2012
(No difference)

OCA at 10:45, 26 July 2012

2012-07-26T10:45:24Z

← Older revision		Revision as of 10:45, 26 July 2012
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	~~{{Seed}}~~		[[Image:2w4e.png\|left\|200px]]
	[[Image:2w4e.~~jpg~~\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2w4e", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_2w4e\| PDB=2w4e \| SCENE= }}		{{STRUCTURE_2w4e\| PDB=2w4e \| SCENE= }}

	===STRUCTURE OF AN N-TERMINALLY TRUNCATED NUDIX HYDROLASE DR2204 FROM DEINOCOCCUS RADIODURANS===		===STRUCTURE OF AN N-TERMINALLY TRUNCATED NUDIX HYDROLASE DR2204 FROM DEINOCOCCUS RADIODURANS===


	~~<!--~~
	~~The line below this paragraph, {{ABSTRACT_PUBMED_19923723}}, adds the Publication Abstract to the page~~
	~~(as it appears on PubMed at http://www.pubmed.gov), where 19923723 is the PubMed ID number.~~
	~~-->~~
	{{ABSTRACT_PUBMED_19923723}}		{{ABSTRACT_PUBMED_19923723}}

	==About this Structure==		==About this Structure==
	~~2W4E~~ is a 2 ~~chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA].		[[2w4e]] is a 2 chain structure of [[ADP-ribose pyrophosphatase]] with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4E OCA].

			==See Also==
			*[[ADP-ribose pyrophosphatase\|ADP-ribose pyrophosphatase]]

	==Reference==		==Reference==
	<ref group="xtra">PMID:~~19923723~~</ref><references group="xtra"/>		<ref group="xtra">PMID:019923723</ref><references group="xtra"/>
	[[Category: ADP-ribose diphosphatase]]		[[Category: ADP-ribose diphosphatase]]
	[[Category: Deinococcus radiodurans]]		[[Category: Deinococcus radiodurans]]
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	[[Category: Adp-ribose pyrophosphatase]]		[[Category: Adp-ribose pyrophosphatase]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 2 10:09:06 2009''~~