2yzs - Revision history

OCA at 09:39, 6 November 2024

2024-11-06T09:39:29Z

← Older revision		Revision as of 09:39, 6 November 2024
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	<StructureSection load='2yzs' size='340' side='right'caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2yzs' size='340' side='right'caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex~~ aeolicus~~" huber and stetter 2001~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZS FirstGlance]. <br>		<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZS FirstGlance]. <br>
	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [https://pdbe.org/2yzs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [https://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzs ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [https://pdbe.org/2yzs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [https://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzs ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/CAS1_AQUAE CAS1_AQUAE]] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.[HAMAP-Rule:MF_01470]		[https://www.uniprot.org/uniprot/CAS1_AQUAE CAS1_AQUAE] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.[HAMAP-Rule:MF_01470]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzs_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzs_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Aquifex aeolicus ~~huber and stetter 2001~~]]		[[Category: Aquifex aeolicus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Ebihara, A]]		[[Category: Ebihara A]]
	[[Category: Kuramitsu, S]]		[[Category: Kuramitsu S]]
	~~[[Category: Structural genomic~~]]		[[Category: Yokoyama S]]
	[[Category: Yokoyama, S]]
	~~[[Category: National project on protein structural and functional analyse]]~~
	~~[[Category: Nppsfa]]~~
	~~[[Category: Rsgi]]~~
	~~[[Category: Uncharacterized conserved protein]]~~
	~~[[Category: Unknown function~~]]

OCA at 10:43, 8 December 2021

2021-12-08T10:43:06Z

← Older revision		Revision as of 10:43, 8 December 2021
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	<StructureSection load='2yzs' size='340' side='right'caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2yzs' size='340' side='right'caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2YZS FirstGlance]. <br>		<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZS FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [~~http~~://pdbe.org/2yzs PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzs ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [https://pdbe.org/2yzs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [https://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzs ProSAT], [https://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/CAS1_AQUAE CAS1_AQUAE]] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.[HAMAP-Rule:MF_01470]		[[https://www.uniprot.org/uniprot/CAS1_AQUAE CAS1_AQUAE]] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.[HAMAP-Rule:MF_01470]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 07:29, 31 July 2019

2019-07-31T07:29:57Z

← Older revision		Revision as of 07:29, 31 July 2019
Line 1:		Line 1:

	==Crystal structure of uncharacterized conserved protein from Aquifex aeolicus==		==Crystal structure of uncharacterized conserved protein from Aquifex aeolicus==
	<StructureSection load='2yzs' size='340' side='right' caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2yzs' size='340' side='right'caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZS FirstGlance]. <br>		<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZS FirstGlance]. <br>
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzs_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzs_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Aquifex aeolicus huber and stetter 2001]]		[[Category: Aquifex aeolicus huber and stetter 2001]]
			[[Category: Large Structures]]
	[[Category: Ebihara, A]]		[[Category: Ebihara, A]]
	[[Category: Kuramitsu, S]]		[[Category: Kuramitsu, S]]

OCA at 18:37, 5 August 2016

2016-08-05T18:37:17Z

← Older revision		Revision as of 18:37, 5 August 2016
Line 1:		Line 1:

	==Crystal structure of uncharacterized conserved protein from Aquifex aeolicus==		==Crystal structure of uncharacterized conserved protein from Aquifex aeolicus==
	<StructureSection load='2yzs' size='340' side='right' caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2yzs' size='340' side='right' caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aquifex_aeolicus Aquifex~~ aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZS FirstGlance]. <br>		<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZS FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [http://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [http://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [http://pdbe.org/2yzs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [http://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzs ProSAT], [http://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/~~O66692_AQUAE O66692_AQUAE~~]] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette ~~(By similarity)~~.		[[http://www.uniprot.org/uniprot/CAS1_AQUAE CAS1_AQUAE]] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.[HAMAP-Rule:MF_01470]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yzs ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus huber and stetter 2001]]
	[[Category: Ebihara, A]]		[[Category: Ebihara, A]]
	[[Category: Kuramitsu, S]]		[[Category: Kuramitsu, S]]

OCA at 21:01, 25 December 2014

2014-12-25T21:01:37Z

← Older revision		Revision as of 21:01, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZS FirstGlance]. <br>		<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZS FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [http://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [http://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [http://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [http://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>
	<table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/O66692_AQUAE O66692_AQUAE]] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
	[[Category: Ebihara, A.]]		[[Category: Ebihara, A]]
	[[Category: Kuramitsu, S.]]		[[Category: Kuramitsu, S]]
	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]		[[Category: Structural genomic]]
	[[Category: Yokoyama, S.]]		[[Category: Yokoyama, S]]
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
	~~[[Category: Riken structural genomics/proteomics initiative]]~~
	[[Category: Rsgi]]		[[Category: Rsgi]]
	~~[[Category: Structural genomic]]~~
	[[Category: Uncharacterized conserved protein]]		[[Category: Uncharacterized conserved protein]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 04:53, 2 October 2014

2014-10-02T04:53:56Z

← Older revision		Revision as of 04:53, 2 October 2014
Line 1:		Line 1:
	~~[[Image:2yzs.png\|left\|200px]]~~		==Crystal structure of uncharacterized conserved protein from Aquifex aeolicus==
			<StructureSection load='2yzs' size='340' side='right' caption='[[2yzs]], [[Resolution\|resolution]] 2.00Å' scene=''>
	~~{{STRUCTURE_2yzs\| PDB=2yzs \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YZS FirstGlance]. <br>
	===Crystal structure of uncharacterized conserved protein from Aquifex aeolicus===		</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
			<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yzs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzs OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yzs RCSB], [http://www.ebi.ac.uk/pdbsum/2yzs PDBsum], [http://www.topsan.org/Proteins/RSGI/2yzs TOPSAN]</span></td></tr>
	==~~About this Structure~~==		<table>
	[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA].		== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzs_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			__TOC__
			</StructureSection>
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
	[[Category: Ebihara, A.]]		[[Category: Ebihara, A.]]

OCA: Protected "2yzs" [edit=sysop:move=sysop]

2013-01-07T20:46:24Z

Protected "2yzs" [edit=sysop:move=sysop]

← Older revision	Revision as of 20:46, 7 January 2013
(No difference)

OCA at 20:46, 7 January 2013

2013-01-07T20:46:22Z

← Older revision		Revision as of 20:46, 7 January 2013
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	~~{{Seed}}~~
	[[Image:2yzs.png\|left\|200px]]		[[Image:2yzs.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_2yzs", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
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	{{STRUCTURE_2yzs\| PDB=2yzs \| SCENE= }}		{{STRUCTURE_2yzs\| PDB=2yzs \| SCENE= }}

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	==About this Structure==		==About this Structure==
	~~2YZS~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA].		[[2yzs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA].
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
	[[Category: Ebihara, A.]]		[[Category: Ebihara, A.]]
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	[[Category: Uncharacterized conserved protein]]		[[Category: Uncharacterized conserved protein]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:03:40 2008''~~

OCA at 13:03, 16 November 2008

2008-11-16T13:03:42Z

← Older revision		Revision as of 13:03, 16 November 2008
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	==About this Structure==		==About this Structure==
	2YZS is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA].		2YZS is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZS OCA].
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
	~~[[Category: Single protein]]~~
	[[Category: Ebihara, A.]]		[[Category: Ebihara, A.]]
	[[Category: Kuramitsu, S.]]		[[Category: Kuramitsu, S.]]
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	[[Category: Unknown function]]		[[Category: Unknown function]]

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OCA at 20:17, 28 September 2008

2008-09-28T20:17:53Z

← Older revision		Revision as of 20:17, 28 September 2008
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	[[Image:2yzs.~~jpg~~\|left\|200px]]		{{Seed}}
			[[Image:2yzs.png\|left\|200px]]

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	{{STRUCTURE_2yzs\| PDB=2yzs \| SCENE= }}		{{STRUCTURE_2yzs\| PDB=2yzs \| SCENE= }}

	~~'''~~Crystal structure of uncharacterized conserved protein from Aquifex aeolicus~~'''~~		===Crystal structure of uncharacterized conserved protein from Aquifex aeolicus===


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	[[Category: Uncharacterized conserved protein]]		[[Category: Uncharacterized conserved protein]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~May 4 19~~:44:56 2008''
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