3cfd - Revision history

OCA at 07:54, 9 October 2024

2024-10-09T07:54:09Z

← Older revision		Revision as of 07:54, 9 October 2024
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	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/3cfd_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/3cfd_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>

OCA at 12:27, 30 August 2023

2023-08-30T12:27:29Z

← Older revision		Revision as of 12:27, 30 August 2023
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	<StructureSection load='3cfd' size='340' side='right'caption='[[3cfd]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3cfd' size='340' side='right'caption='[[3cfd]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3cfd]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=3CFD FirstGlance]. <br>		<table><tr><td colspan='2'>[[3cfd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CFD FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene>~~</td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]~~</td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [~~http~~://pdbe.org/3cfd PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3cfd PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3cfd ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [https://pdbe.org/3cfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [https://www.ebi.ac.uk/pdbsum/3cfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cfd ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Debler~~, E W~~]]		[[Category: Debler EW]]
	[[Category: Heine, A]]		[[Category: Heine A]]
	[[Category: Wilson~~, I A]]~~		[[Category: Wilson IA]]
	~~[[Category: Hapten complex]]~~
	~~[[Category: Immune system]]~~
	~~[[Category: Immunoglobulin]]~~
	~~[[Category: Purple-fluorescent antibody~~]]

OCA at 10:26, 12 August 2020

2020-08-12T10:26:34Z

← Older revision		Revision as of 10:26, 12 August 2020
Line 1:		Line 1:

	==Purple-fluorescent antibody EP2-25C10 in complex with its stilbene hapten==		==Purple-fluorescent antibody EP2-25C10 in complex with its stilbene hapten==
	<StructureSection load='3cfd' size='340' side='right' caption='[[3cfd]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3cfd' size='340' side='right'caption='[[3cfd]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3cfd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3CFD FirstGlance]. <br>		<table><tr><td colspan='2'>[[3cfd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3CFD FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://pdbe.org/3cfd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3cfd ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://pdbe.org/3cfd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3cfd ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	==See Also==		==See Also==
	*[[Antibody 3D structures\|Antibody 3D structures]]		*[[Antibody 3D structures\|Antibody 3D structures]]
			*[[3D structures of non-human antibody\|3D structures of non-human antibody]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Large Structures]]
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Debler, E W]]		[[Category: Debler, E W]]

OCA at 13:17, 7 November 2018

2018-11-07T13:17:51Z

← Older revision		Revision as of 13:17, 7 November 2018
Line 1:		Line 1:

	==Purple-fluorescent antibody EP2-25C10 in complex with its stilbene hapten==		==Purple-fluorescent antibody EP2-25C10 in complex with its stilbene hapten==
	<StructureSection load='3cfd' size='340' side='right' caption='[[3cfd]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3cfd' size='340' side='right' caption='[[3cfd]], [[Resolution\|resolution]] 2.50Å' scene=''>
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	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://pdbe.org/3cfd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://pdbe.org/3cfd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3cfd ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/3cfd_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/3cfd_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 28:		Line 29:

	==See Also==		==See Also==
	*[[Antibody\|Antibody]]		*[[Antibody 3D structures\|Antibody 3D structures]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 18:22, 9 February 2016

2016-02-09T18:22:13Z

← Older revision		Revision as of 18:22, 9 February 2016
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	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://pdbe.org/3cfd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cfd ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 3cfd" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 11:07, 20 January 2015

2015-01-20T11:07:52Z

← Older revision		Revision as of 11:07, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3cfd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CFD FirstGlance]. <br>		<table><tr><td colspan='2'>[[3cfd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CFD FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene><br>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene></td></tr>
	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum]</span></td></tr>
	<table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Debler, E W.]]		[[Category: Debler, E W]]
	[[Category: Heine, A.]]		[[Category: Heine, A]]
	[[Category: Wilson, I A.]]		[[Category: Wilson, I A]]
	[[Category: Hapten complex]]		[[Category: Hapten complex]]
	[[Category: Immune system]]		[[Category: Immune system]]
	[[Category: Immunoglobulin]]		[[Category: Immunoglobulin]]
	[[Category: Purple-fluorescent antibody]]		[[Category: Purple-fluorescent antibody]]

OCA at 20:50, 2 October 2014

2014-10-02T20:50:43Z

← Older revision		Revision as of 20:50, 2 October 2014
Line 1:		Line 1:
	[[Image:~~3cfd~~.~~png~~\|~~left~~\|~~200px~~]]		==Purple-fluorescent antibody EP2-25C10 in complex with its stilbene hapten==
			<StructureSection load='3cfd' size='340' side='right' caption='[[3cfd]], [[Resolution\|resolution]] 2.50Å' scene=''>
			== Structural highlights ==
			<table><tr><td colspan='2'>[[3cfd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CFD FirstGlance]. <br>
			</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SPB:4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC+ACID'>SPB</scene><br>
			<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fl3\|1fl3]], [[1ub5\|1ub5]], [[1ub6\|1ub6]], [[3cfb\|3cfb]], [[3cfc\|3cfc]], [[3cfe\|3cfe]]</td></tr>
			<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cfd RCSB], [http://www.ebi.ac.uk/pdbsum/3cfd PDBsum]</span></td></tr>
			<table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/3cfd_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			The blue-emissive antibody EP2-19G2 that has been elicited against trans-stilbene has unprecedented ability to produce bright luminescence and has been used as a biosensor in various applications. We show that the prolonged luminescence is not stilbene fluorescence. Instead, the emissive species is a charge-transfer excited complex of an anionic stilbene and a cationic, parallel pi-stacked tryptophan. Upon charge recombination, this complex generates exceptionally bright blue light. Complex formation is enabled by a deeply penetrating ligand-binding pocket, which in turn results from a noncanonical interface between the two variable domains of the antibody.

	~~{{STRUCTURE_3cfd\| PDB=3cfd \| SCENE= }}~~		Deeply inverted electron-hole recombination in a luminescent antibody-stilbene complex.,Debler EW, Kaufmann GF, Meijler MM, Heine A, Mee JM, Pljevaljcic G, Di Bilio AJ, Schultz PG, Millar DP, Janda KD, Wilson IA, Gray HB, Lerner RA Science. 2008 Feb 29;319(5867):1232-5. PMID:18309081<ref>PMID:18309081</ref>

	~~===Purple-fluorescent antibody EP2-25C10 in complex with its stilbene hapten===~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>

	~~{{ABSTRACT_PUBMED_18309081}}~~		==See Also==
			*[[Antibody\|Antibody]]
	==~~About this Structure~~==		== References ==
	[[~~3cfd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus~~]~~. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA~~].		<references/>
			__TOC__
	==~~Reference~~==		</StructureSection>
	<~~ref group="xtra">PMID:018309081<~~/~~ref~~><~~references group="xtra"~~/>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Debler, E W.]]		[[Category: Debler, E W.]]

OCA: Protected "3cfd" [edit=sysop:move=sysop]

2013-01-07T19:57:47Z

Protected "3cfd" [edit=sysop:move=sysop]

← Older revision	Revision as of 19:57, 7 January 2013
(No difference)

OCA at 19:57, 7 January 2013

2013-01-07T19:57:43Z

← Older revision		Revision as of 19:57, 7 January 2013
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	~~{{Seed}}~~
	[[Image:3cfd.png\|left\|200px]]		[[Image:3cfd.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_3cfd", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_3cfd\| PDB=3cfd \| SCENE= }}		{{STRUCTURE_3cfd\| PDB=3cfd \| SCENE= }}

	===Purple-fluorescent antibody EP2-25C10 in complex with its stilbene hapten===		===Purple-fluorescent antibody EP2-25C10 in complex with its stilbene hapten===


	~~<!--~~
	~~The line below this paragraph, {{ABSTRACT_PUBMED_18309081}}, adds the Publication Abstract to the page~~
	~~(as it appears on PubMed at http://www.pubmed.gov), where 18309081 is the PubMed ID number.~~
	~~-->~~
	{{ABSTRACT_PUBMED_18309081}}		{{ABSTRACT_PUBMED_18309081}}

	==About this Structure==		==About this Structure==
	~~3CFD~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA].		[[3cfd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA].

	==Reference==		==Reference==
	<ref group="xtra">PMID:~~18309081~~</ref><references group="xtra"/>		<ref group="xtra">PMID:018309081</ref><references group="xtra"/>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Debler, E W.]]		[[Category: Debler, E W.]]
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	[[Category: Immunoglobulin]]		[[Category: Immunoglobulin]]
	[[Category: Purple-fluorescent antibody]]		[[Category: Purple-fluorescent antibody]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:46:56 2009''~~

OCA at 09:46, 17 February 2009

2009-02-17T09:46:59Z

← Older revision		Revision as of 09:46, 17 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
	3CFD is a ~~[[Protein complex]]~~ structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA].		3CFD is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFD OCA].

	==Reference==		==Reference==
	Deeply inverted electron-hole recombination in a luminescent antibody-stilbene complex., Debler EW, Kaufmann GF, Meijler MM, Heine A, Mee JM, Pljevaljcic G, Di Bilio AJ, Schultz PG, Millar DP, Janda KD, Wilson IA, Gray HB, Lerner RA, Science. 2008 Feb 29;319(5867):1232-5. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/18309081 18309081]~~		<ref group="xtra">PMID:18309081</ref><references group="xtra"/>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	~~[[Category: Protein complex]]~~
	[[Category: Debler, E W.]]		[[Category: Debler, E W.]]
	[[Category: Heine, A.]]		[[Category: Heine, A.]]
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	[[Category: Purple-fluorescent antibody]]		[[Category: Purple-fluorescent antibody]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Jul 28 15~~:57:~~26 2008~~''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:46:56 2009''