3drf - Revision history

OCA at 08:24, 20 March 2024

2024-03-20T08:24:21Z

← Older revision		Revision as of 08:24, 20 March 2024
Line 3:		Line 3:
	<StructureSection load='3drf' size='340' side='right'caption='[[3drf]], [[Resolution\|resolution]] 1.30Å' scene=''>		<StructureSection load='3drf' size='340' side='right'caption='[[3drf]], [[Resolution\|resolution]] 1.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3drf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Laclm Laclm~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRF FirstGlance]. <br>		<table><tr><td colspan='2'>[[3drf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._cremoris_MG1363 Lactococcus lactis subsp. cremoris MG1363]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRF FirstGlance]. <br>
	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[3drg\|3drg]], [[3drh\|3drh]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</div></td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.3Å</td></tr>
	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">oppA, llmg_0701 ([https://www.ncbi.nlm.nih~~.~~gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=416870 LACLM])~~</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [https://pdbe.org/3drf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [https://www.ebi.ac.uk/pdbsum/3drf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [https://pdbe.org/3drf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [https://www.ebi.ac.uk/pdbsum/3drf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drf ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/A2RJ53_LACLM A2RJ53_LACLM]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 18:		Line 19:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3drf ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3drf ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	~~<div style="background-color:#fffaf0;">~~
	~~== Publication Abstract from PubMed ==~~
	Oligopeptide-binding protein A (OppA) from Lactococcus lactis binds peptides of an exceptionally wide range of lengths (4-35 residues), with no apparent sequence preference. Here, we present the crystal structures of OppA in the open- and closed-liganded conformations. The structures directly explain the protein's phenomenal promiscuity. A huge cavity allows binding of very long peptides, and a lack of constraints for the position of the N and C termini of the ligand is compatible with binding of peptides with varying lengths. Unexpectedly, the peptide's amino-acid composition (but not the exact sequence) appears to have a function in selection, with a preference for proline-rich peptides containing at least one isoleucine. These properties can be related to the physiology of the organism: L. lactis is auxotrophic for branched chain amino acids and favours proline-rich caseins as a source of amino acids. We propose a new mechanism for peptide selection based on amino-acid composition rather than sequence.

	The structural basis for peptide selection by the transport receptor OppA.,Berntsson RP, Doeven MK, Fusetti F, Duurkens RH, Sengupta D, Marrink SJ, Thunnissen AM, Poolman B, Slotboom DJ EMBO J. 2009 Mar 19. PMID:19300437<ref>PMID:19300437</ref>

	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~
	~~</div>~~
	~~<div class="pdbe-citations 3drf" style="background-color:#fffaf0;"></div>~~

	==See Also==		==See Also==
	*[[ABC transporter 3D structures\|ABC transporter 3D structures]]		*[[ABC transporter 3D structures\|ABC transporter 3D structures]]
	~~== References ==~~
	~~<references/>~~
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Laclm~~]]		[[Category: Lactococcus lactis subsp. cremoris MG1363]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Berntsson~~, R P.~~A]]		[[Category: Berntsson RP-A]]
	[[Category: Doeven~~, M K~~]]		[[Category: Doeven MK]]
	[[Category: Duurkens~~, R H~~]]		[[Category: Duurkens RH]]
	[[Category: Marrink, S J]]		[[Category: Marrink S-J]]
	[[Category: Poolman, B]]		[[Category: Poolman B]]
	[[Category: Sengupta, D]]		[[Category: Sengupta D]]
	[[Category: Slotboom, D J]]		[[Category: Slotboom D-J]]
	[[Category: Thunnissen, A M]]		[[Category: Thunnissen A-M]]
	~~[[Category: Oligo-peptide binding]]~~
	~~[[Category: Peptide binding protein]]~~
	~~[[Category: Venus fly-trap]]~~
	~~[[Category: Voluminous binding cavity~~]]

OCA at 08:06, 9 February 2022

2022-02-09T08:06:09Z

← Older revision		Revision as of 08:06, 9 February 2022
Line 1:		Line 1:

	==Lactococcal OppA complexed with an endogenous peptide in the closed conformation==		==Lactococcal OppA complexed with an endogenous peptide in the closed conformation==
	<StructureSection load='3drf' size='340' side='right' caption='[[3drf]], [[Resolution\|resolution]] 1.30Å' scene=''>		<StructureSection load='3drf' size='340' side='right'caption='[[3drf]], [[Resolution\|resolution]] 1.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3drf]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3DRF FirstGlance]. <br>		<table><tr><td colspan='2'>[[3drf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRF FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drg\|3drg]], [[3drh\|3drh]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3drg\|3drg]], [[3drh\|3drh]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</div></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [~~http~~://pdbe.org/3drf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3drf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3drf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [https://pdbe.org/3drf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [https://www.ebi.ac.uk/pdbsum/3drf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drf ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 29:		Line 29:

	==See Also==		==See Also==
	*[[~~Oligopeptide-binding protein~~\|~~Oligopeptide-binding protein~~]]		*[[ABC transporter 3D structures\|ABC transporter 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 35:		Line 35:
	</StructureSection>		</StructureSection>
	[[Category: Laclm]]		[[Category: Laclm]]
			[[Category: Large Structures]]
	[[Category: Berntsson, R P.A]]		[[Category: Berntsson, R P.A]]
	[[Category: Doeven, M K]]		[[Category: Doeven, M K]]

OCA at 09:48, 14 November 2018

2018-11-14T09:48:43Z

← Older revision		Revision as of 09:48, 14 November 2018
Line 1:		Line 1:

	==Lactococcal OppA complexed with an endogenous peptide in the closed conformation==		==Lactococcal OppA complexed with an endogenous peptide in the closed conformation==
	<StructureSection load='3drf' size='340' side='right' caption='[[3drf]], [[Resolution\|resolution]] 1.30Å' scene=''>		<StructureSection load='3drf' size='340' side='right' caption='[[3drf]], [[Resolution\|resolution]] 1.30Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drg\|3drg]], [[3drh\|3drh]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drg\|3drg]], [[3drh\|3drh]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [http://pdbe.org/3drf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [http://www.ebi.ac.uk/pdbsum/3drf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [http://pdbe.org/3drf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [http://www.ebi.ac.uk/pdbsum/3drf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3drf ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3drf_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3drf_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 15:27, 7 February 2016

2016-02-07T15:27:18Z

← Older revision		Revision as of 15:27, 7 February 2016
Line 5:		Line 5:
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drg\|3drg]], [[3drh\|3drh]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drg\|3drg]], [[3drh\|3drh]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [http://www.ebi.ac.uk/pdbsum/3drf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [http://pdbe.org/3drf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [http://www.ebi.ac.uk/pdbsum/3drf PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3drf ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 25:		Line 25:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 3drf" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 17:16, 21 December 2014

2014-12-21T17:16:53Z

← Older revision		Revision as of 17:16, 21 December 2014
Line 1:		Line 1:
	~~{{STRUCTURE_3drf\| PDB=3drf \| SCENE= }}~~		==Lactococcal OppA complexed with an endogenous peptide in the closed conformation==
	===Lactococcal OppA complexed with an endogenous peptide in the closed conformation===		<StructureSection load='3drf' size='340' side='right' caption='[[3drf]], [[Resolution\|resolution]] 1.30Å' scene=''>
	~~{{ABSTRACT_PUBMED_19300437}}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[3drf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DRF FirstGlance]. <br>
			</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drg\|3drg]], [[3drh\|3drh]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3drf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3drf RCSB], [http://www.ebi.ac.uk/pdbsum/3drf PDBsum]</span></td></tr>
			</table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3drf_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Oligopeptide-binding protein A (OppA) from Lactococcus lactis binds peptides of an exceptionally wide range of lengths (4-35 residues), with no apparent sequence preference. Here, we present the crystal structures of OppA in the open- and closed-liganded conformations. The structures directly explain the protein's phenomenal promiscuity. A huge cavity allows binding of very long peptides, and a lack of constraints for the position of the N and C termini of the ligand is compatible with binding of peptides with varying lengths. Unexpectedly, the peptide's amino-acid composition (but not the exact sequence) appears to have a function in selection, with a preference for proline-rich peptides containing at least one isoleucine. These properties can be related to the physiology of the organism: L. lactis is auxotrophic for branched chain amino acids and favours proline-rich caseins as a source of amino acids. We propose a new mechanism for peptide selection based on amino-acid composition rather than sequence.

	~~==About this Structure==~~		The structural basis for peptide selection by the transport receptor OppA.,Berntsson RP, Doeven MK, Fusetti F, Duurkens RH, Sengupta D, Marrink SJ, Thunnissen AM, Poolman B, Slotboom DJ EMBO J. 2009 Mar 19. PMID:19300437<ref>PMID:19300437</ref>
	~~[[3drf]] is a 2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Laclm Laclm]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=3DRF OCA].~~
			From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>

	==See Also==		==See Also==
	*[[Oligopeptide-binding protein\|Oligopeptide-binding protein]]		*[[Oligopeptide-binding protein\|Oligopeptide-binding protein]]
			== References ==
	==~~Reference~~==		<references/>
	~~<ref group="xtra">PMID:019300437</ref>~~<references ~~group="xtra"~~/><~~references~~/>		__TOC__
			</StructureSection>
	[[Category: Laclm]]		[[Category: Laclm]]
	[[Category: Berntsson, R P.A.]]		[[Category: Berntsson, R P.A]]
	[[Category: Doeven, M K.]]		[[Category: Doeven, M K]]
	[[Category: Duurkens, R H.]]		[[Category: Duurkens, R H]]
	[[Category: Marrink, S J.]]		[[Category: Marrink, S J]]
	[[Category: Poolman, B.]]		[[Category: Poolman, B]]
	[[Category: Sengupta, D.]]		[[Category: Sengupta, D]]
	[[Category: Slotboom, D J.]]		[[Category: Slotboom, D J]]
	[[Category: Thunnissen, A M.]]		[[Category: Thunnissen, A M]]
	[[Category: Oligo-peptide binding]]		[[Category: Oligo-peptide binding]]
	[[Category: Peptide binding protein]]		[[Category: Peptide binding protein]]
	[[Category: Venus fly-trap]]		[[Category: Venus fly-trap]]
	[[Category: Voluminous binding cavity]]		[[Category: Voluminous binding cavity]]

OCA at 08:26, 5 February 2014

2014-02-05T08:26:52Z

← Older revision		Revision as of 08:26, 5 February 2014
Line 1:		Line 1:
	~~[[Image:3drf.png\|left\|200px]]~~

	{{STRUCTURE_3drf\| PDB=3drf \| SCENE= }}		{{STRUCTURE_3drf\| PDB=3drf \| SCENE= }}

	===Lactococcal OppA complexed with an endogenous peptide in the closed conformation===		===Lactococcal OppA complexed with an endogenous peptide in the closed conformation===

	{{ABSTRACT_PUBMED_19300437}}		{{ABSTRACT_PUBMED_19300437}}

	==About this Structure==		==About this Structure==
	[[3drf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Lactococcus_lactis Lactococcus lactis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA].		[[3drf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA].

	==See Also==		==See Also==
Line 14:		Line 10:

	==Reference==		==Reference==
	<ref group="xtra">PMID:019300437</ref><references group="xtra"/>		<ref group="xtra">PMID:019300437</ref><references group="xtra"/><references/>
	[[Category: ~~Lactococcus lactis~~]]		[[Category: Laclm]]
	[[Category: Berntsson, R P.A.]]		[[Category: Berntsson, R P.A.]]
	[[Category: Doeven, M K.]]		[[Category: Doeven, M K.]]

OCA at 07:03, 20 October 2012

2012-10-20T07:03:58Z

← Older revision		Revision as of 07:03, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
	[[3drf]] is a 2 chain structure ~~of [[Oligopeptide-binding protein]]~~ with sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA].		[[3drf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRF OCA].

	==See Also==		==See Also==

OCA: Protected "3drf" [edit=sysop:move=sysop]

2012-07-25T15:10:10Z

Protected "3drf" [edit=sysop:move=sysop]

← Older revision	Revision as of 15:10, 25 July 2012
(No difference)

OCA at 15:10, 25 July 2012

2012-07-25T15:10:07Z

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
+[[Image:3drf.png|left|200px]]
-The entry 3drf is ON HOLD  until Paper Publication
+{{STRUCTURE_3drf|  PDB=3drf  |  SCENE=  }}
-Authors: Berntsson, R.P.-A., Doeven, M.K., Duurkens, R., Sengupta, D., Marrink, S.-J., Thunnissen, A.-M., Poolman, B., Slotboom, D.-J.
+===Lactococcal OppA complexed with an endogenous peptide in the closed conformation===
-Description: Lactococcal OppA complexed with an endogenous peptide in the closed conformation
+{{ABSTRACT_PUBMED_19300437}}
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr  9 12:15:43 2009''
+==About this Structure==

OCA at 09:15, 9 April 2009

2009-04-09T09:15:44Z

@@ Line 1: / Line 1: @@
-{{Seed}}
+'''Unreleased structure'''
-<!--
+The entry 3drf is ON HOLD  until Paper Publication
-===Lactococcal OppA complexed with an endogenous peptide in the closed conformation===
+Authors: Berntsson, R.P.-A., Doeven, M.K., Duurkens, R., Sengupta, D., Marrink, S.-J., Thunnissen, A.-M., Poolman, B., Slotboom, D.-J.
-<!--
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr  9 12:15:43 2009''