3kl2 - Revision history

OCA at 10:17, 21 February 2024

2024-02-21T10:17:20Z

← Older revision		Revision as of 10:17, 21 February 2024
Line 1:		Line 1:

	==Crystal structure of a putative isochorismatase from Streptomyces avermitilis==		==Crystal structure of a putative isochorismatase from Streptomyces avermitilis==
	<StructureSection load='3kl2' size='340' side='right' caption='[[3kl2]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='3kl2' size='340' side='right'caption='[[3kl2]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3kl2]] is a 12 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"streptomyces_avermitilis"_burg_et_al._1979 "streptomyces~~ avermitilis~~" burg et al. 1979~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KL2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3KL2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3kl2]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avermitilis Streptomyces avermitilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KL2 FirstGlance]. <br>
	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=SO4:SULFATE+ION'>SO4</scene~~></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>dhbB1, SAV1388, SAV_1388 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~33903~~ "~~Streptomyces avermitilis~~" ~~Burg et al. 1979])~~</td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3kl2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kl2 OCA], [~~http~~://pdbe.org/3kl2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3kl2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3kl2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3kl2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kl2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kl2 OCA], [https://pdbe.org/3kl2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kl2 RCSB], [https://www.ebi.ac.uk/pdbsum/3kl2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kl2 ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/Q82NB5_STRAW Q82NB5_STRAW]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kl/3kl2_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kl/3kl2_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 20:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Streptomyces avermitilis ~~burg et al. 1979~~]]		[[Category: Large Structures]]
	[[Category: Almo~~, S C~~]]		[[Category: Streptomyces avermitilis]]
	[[Category: Bain~~, K T~~]]		[[Category: Almo SC]]
	[[Category: Bonanno~~, J B~~]]		[[Category: Bain KT]]
	[[Category: Burley~~, S K~~]]		[[Category: Bonanno JB]]
	[[Category: Chang, S]]		[[Category: Burley SK]]
	[[Category: Dickey, M]]		[[Category: Chang S]]
	~~[[Category: Structural genomic~~]]		[[Category: Dickey M]]
	[[Category: Ozyurt, S]]		[[Category: Ozyurt S]]
	[[Category: Sauder~~, J M~~]]		[[Category: Sauder JM]]
	[[Category: Wasserman, S]]		[[Category: Wasserman S]]
	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]~~
	~~[[Category: PSI, Protein structure initiative]]~~
	~~[[Category: Unknown function~~]]

OCA at 07:47, 11 August 2016

2016-08-11T07:47:35Z

← Older revision		Revision as of 07:47, 11 August 2016
Line 1:		Line 1:

	==Crystal structure of a putative isochorismatase from Streptomyces avermitilis==		==Crystal structure of a putative isochorismatase from Streptomyces avermitilis==
	<StructureSection load='3kl2' size='340' side='right' caption='[[3kl2]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='3kl2' size='340' side='right' caption='[[3kl2]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3kl2]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Streptomyces_avermitilis Streptomyces~~ avermitilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KL2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KL2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3kl2]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/"streptomyces_avermitilis"_burg_et_al._1979 "streptomyces avermitilis" burg et al. 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KL2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KL2 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dhbB1, SAV1388, SAV_1388 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33903 Streptomyces avermitilis])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dhbB1, SAV1388, SAV_1388 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33903 "Streptomyces avermitilis" Burg et al. 1979])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kl2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kl2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kl2 RCSB], [http://www.ebi.ac.uk/pdbsum/3kl2 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kl2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kl2 OCA], [http://pdbe.org/3kl2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3kl2 RCSB], [http://www.ebi.ac.uk/pdbsum/3kl2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3kl2 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kl2 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Streptomyces avermitilis]]		[[Category: Streptomyces avermitilis burg et al. 1979]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Bain, K T]]		[[Category: Bain, K T]]

OCA at 12:50, 6 November 2014

2014-11-06T12:50:18Z

← Older revision		Revision as of 12:50, 6 November 2014
Line 1:		Line 1:
	~~{{STRUCTURE_3kl2\| PDB=3kl2 \| SCENE= }}~~		==Crystal structure of a putative isochorismatase from Streptomyces avermitilis==
	===Crystal structure of a putative isochorismatase from Streptomyces avermitilis===		<StructureSection load='3kl2' size='340' side='right' caption='[[3kl2]], [[Resolution\|resolution]] 2.30Å' scene=''>
			== Structural highlights ==
	==~~About this Structure~~==		<table><tr><td colspan='2'>[[3kl2]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_avermitilis Streptomyces avermitilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KL2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KL2 FirstGlance]. <br>
	[[3kl2]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_avermitilis Streptomyces avermitilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KL2 OCA].		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">dhbB1, SAV1388, SAV_1388 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33903 Streptomyces avermitilis])</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kl2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kl2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kl2 RCSB], [http://www.ebi.ac.uk/pdbsum/3kl2 PDBsum]</span></td></tr>
			</table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kl/3kl2_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			__TOC__
			</StructureSection>
	[[Category: Streptomyces avermitilis]]		[[Category: Streptomyces avermitilis]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C]]
	[[Category: Bain, K T.]]		[[Category: Bain, K T]]
	[[Category: Bonanno, J B.]]		[[Category: Bonanno, J B]]
	[[Category: Burley, S K.]]		[[Category: Burley, S K]]
	[[Category: Chang, S.]]		[[Category: Chang, S]]
	[[Category: Dickey, M~~.]]~~		[[Category: Dickey, M]]
	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]~~
	~~[[Category: Ozyurt, S.]]~~
	~~[[Category: Sauder, J M.]]~~
	~~[[Category: Wasserman, S.]]~~
	~~[[Category: New york sgx research center for structural genomic]]~~
	~~[[Category: Nysgxrc]]~~
	~~[[Category: Protein structure initiative]]~~
	~~[[Category: Psi-2~~]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
			[[Category: Ozyurt, S]]
			[[Category: Sauder, J M]]
			[[Category: Wasserman, S]]
			[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
			[[Category: PSI, Protein structure initiative]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA: Protected "3kl2" [edit=sysop:move=sysop]

2013-04-04T02:17:09Z

Protected "3kl2" [edit=sysop:move=sysop]

← Older revision	Revision as of 02:17, 4 April 2013
(No difference)

OCA at 02:17, 4 April 2013

2013-04-04T02:17:07Z

← Older revision		Revision as of 02:17, 4 April 2013
Line 1:		Line 1:
	~~{{Seed}}~~
	~~[[Image:3kl2.jpg\|left\|200px]]~~

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_3kl2", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_3kl2\| PDB=3kl2 \| SCENE= }}		{{STRUCTURE_3kl2\| PDB=3kl2 \| SCENE= }}

	===Crystal structure of a putative isochorismatase from Streptomyces avermitilis===		===Crystal structure of a putative isochorismatase from Streptomyces avermitilis===


	==About this Structure==		==About this Structure==
	~~3KL2~~ is a 12 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Streptomyces_avermitilis Streptomyces avermitilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KL2 OCA].		[[3kl2]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_avermitilis Streptomyces avermitilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KL2 OCA].
	[[Category: Streptomyces avermitilis]]		[[Category: Streptomyces avermitilis]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
Line 32:		Line 21:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 25 10:21:39 2009''~~

OCA at 08:21, 25 November 2009

2009-11-25T08:21:39Z

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
+{{Seed}}
-The entry 3kl2 is ON HOLD
+<!--
-Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Chang, S., Ozyurt, S., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
+===Crystal structure of a putative isochorismatase from Streptomyces avermitilis===
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 18 18:58:16 2009''
+==About this Structure==

OCA: New page: '''Unreleased structure''' The entry 3kl2 is ON HOLD Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Chang, S., Ozyurt, S., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New Yo...

2009-11-18T16:58:16Z

New page: '''Unreleased structure''' The entry 3kl2 is ON HOLD Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Chang, S., Ozyurt, S., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New Yo...

New page

'''Unreleased structure'''

The entry 3kl2 is ON HOLD

Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Chang, S., Ozyurt, S., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

Description: Crystal structure of a putative isochorismatase from Streptomyces avermitilis

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 18 18:58:16 2009''