3ksh - Revision history

OCA at 09:21, 30 October 2024

2024-10-30T09:21:26Z

← Older revision		Revision as of 09:21, 30 October 2024
Line 13:		Line 13:
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/3ksh_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/3ksh_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>

OCA at 16:17, 1 November 2023

2023-11-01T16:17:41Z

← Older revision		Revision as of 16:17, 1 November 2023
Line 1:		Line 1:

	==Structure of fRMsr of Staphylococcus aureus (oxidized form)==		==Structure of fRMsr of Staphylococcus aureus (oxidized form)==
	<StructureSection load='3ksh' size='340' side='right' caption='[[3ksh]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='3ksh' size='340' side='right'caption='[[3ksh]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3ksh]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Staar Staar~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3KSH FirstGlance]. <br>		<table><tr><td colspan='2'>[[3ksh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_MRSA252 Staphylococcus aureus subsp. aureus MRSA252]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KSH FirstGlance]. <br>
	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ksf\|3ksf]]~~, [[~~3ksg~~\|~~3ksg]], [[3ksi\|3ksi~~]]</td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>SAR1796 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~282458 STAAR])</td~~><~~/tr>~~		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ksh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ksh OCA], [https://pdbe.org/3ksh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ksh RCSB], [https://www.ebi.ac.uk/pdbsum/3ksh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ksh ProSAT]</span></td></tr>
	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[http://en.wikipedia.org/wiki/L-methionine_(R)-S-oxide_reductase L-methionine (R)-S-oxide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.4.14 1.8.4.14]~~ </~~span~~></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ksh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ksh OCA], [~~http~~://pdbe.org/3ksh PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ksh RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ksh PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ksh ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 22:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Staar~~]]		[[Category: Large Structures]]
	[[Category: ~~Bong, S M~~]]		[[Category: Staphylococcus aureus subsp. aureus MRSA252]]
	[[Category: ~~Chi, Y M~~]]		[[Category: Bong SM]]
	[[Category: ~~Free-met-r-so]]~~		[[Category: Chi YM]]
	~~[[Category: Frmsr]]~~
	~~[[Category: Oxidoreductase~~]]

OCA at 07:10, 2 January 2019

2019-01-02T07:10:03Z

← Older revision		Revision as of 07:10, 2 January 2019
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/3ksh_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/3ksh_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 06:12, 5 August 2016

2016-08-05T06:12:22Z

← Older revision		Revision as of 06:12, 5 August 2016
Line 1:		Line 1:

	==Structure of fRMsr of Staphylococcus aureus (oxidized form)==		==Structure of fRMsr of Staphylococcus aureus (oxidized form)==
	<StructureSection load='3ksh' size='340' side='right' caption='[[3ksh]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='3ksh' size='340' side='right' caption='[[3ksh]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3ksh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Staphylococcus_aureus Staphylococcus aureus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KSH FirstGlance]. <br>		<table><tr><td colspan='2'>[[3ksh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staar Staar]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KSH FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ksf\|3ksf]], [[3ksg\|3ksg]], [[3ksi\|3ksi]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ksf\|3ksf]], [[3ksg\|3ksg]], [[3ksi\|3ksi]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SAR1796 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~1280 Staphylococcus aureus~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SAR1796 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=282458 STAAR])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-methionine_(R)-S-oxide_reductase L-methionine (R)-S-oxide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.4.14 1.8.4.14] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-methionine_(R)-S-oxide_reductase L-methionine (R)-S-oxide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.4.14 1.8.4.14] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ksh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ksh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ksh RCSB], [http://www.ebi.ac.uk/pdbsum/3ksh PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ksh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ksh OCA], [http://pdbe.org/3ksh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ksh RCSB], [http://www.ebi.ac.uk/pdbsum/3ksh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ksh ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ksh ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Staphylococcus aureus~~]]		[[Category: Staar]]
	[[Category: Bong, S M]]		[[Category: Bong, S M]]
	[[Category: Chi, Y M]]		[[Category: Chi, Y M]]

OCA at 17:10, 18 December 2014

2014-12-18T17:10:30Z

← Older revision		Revision as of 17:10, 18 December 2014
Line 1:		Line 1:
	~~{{STRUCTURE_3ksh\| PDB=3ksh \| SCENE= }}~~		==Structure of fRMsr of Staphylococcus aureus (oxidized form)==
	===Structure of fRMsr of Staphylococcus aureus (oxidized form)===		<StructureSection load='3ksh' size='340' side='right' caption='[[3ksh]], [[Resolution\|resolution]] 1.50Å' scene=''>
	~~{{ABSTRACT_PUBMED_020504774}}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[3ksh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KSH FirstGlance]. <br>
	==~~About this Structure~~==		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	[[3ksh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA].		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ksf\|3ksf]], [[3ksg\|3ksg]], [[3ksi\|3ksi]]</td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SAR1796 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
			<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-methionine_(R)-S-oxide_reductase L-methionine (R)-S-oxide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.4.14 1.8.4.14] </span></td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ksh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ksh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ksh RCSB], [http://www.ebi.ac.uk/pdbsum/3ksh PDBsum]</span></td></tr>
			</table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/3ksh_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>
			__TOC__
			</StructureSection>
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Bong, S M.]]		[[Category: Bong, S M]]
	[[Category: Chi, Y M.]]		[[Category: Chi, Y M]]
	[[Category: Free-met-r-so]]		[[Category: Free-met-r-so]]
	[[Category: Frmsr]]		[[Category: Frmsr]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA: Protected "3ksh" [edit=sysop:move=sysop]

2013-04-04T20:20:02Z

Protected "3ksh" [edit=sysop:move=sysop]

← Older revision	Revision as of 20:20, 4 April 2013
(No difference)

OCA at 20:19, 4 April 2013

2013-04-04T20:19:55Z

← Older revision		Revision as of 20:19, 4 April 2013
Line 1:		Line 1:
	~~{{Seed}}~~
	~~[[Image:3ksh.png\|left\|200px]]~~

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_3ksh", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_3ksh\| PDB=3ksh \| SCENE= }}		{{STRUCTURE_3ksh\| PDB=3ksh \| SCENE= }}

	===Structure of fRMsr of Staphylococcus aureus (oxidized form)===		===Structure of fRMsr of Staphylococcus aureus (oxidized form)===
			{{ABSTRACT_PUBMED_020504774}}

	==About this Structure==		==About this Structure==
	~~3KSH~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA].		[[3ksh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA].
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Bong, S M.]]		[[Category: Bong, S M.]]
Line 21:		Line 11:
	[[Category: Frmsr]]		[[Category: Frmsr]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 2 08:25:47 2010''~~

OCA at 04:21, 2 June 2010

2010-06-02T04:21:20Z

← Older revision		Revision as of 04:21, 2 June 2010
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
	[[Image:3ksh.~~jpg~~\|left\|200px]]		[[Image:3ksh.png\|left\|200px]]

	<!--		<!--
Line 22:		Line 22:
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~May 26~~ 08:32:31 2010''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 2 08:25:47 2010''

OCA at 04:28, 26 May 2010

2010-05-26T04:28:21Z

← Older revision		Revision as of 04:28, 26 May 2010
Line 1:		Line 1:
	~~'''Unreleased structure'''~~		{{Seed}}
			[[Image:3ksh.jpg\|left\|200px]]

	The ~~entry~~ 3ksh ~~is ON HOLD~~ ~~until May 23 2011~~		<!--
			The line below this paragraph, containing "STRUCTURE_3ksh", creates the "Structure Box" on the page.
			You may change the PDB parameter (which sets the PDB file loaded into the applet)
			or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
			or leave the SCENE parameter empty for the default display.
			-->
			{{STRUCTURE_3ksh\| PDB=3ksh \| SCENE= }}

	~~Authors: Bong, S.M., Chi, Y.M.~~		===Structure of fRMsr of Staphylococcus aureus (oxidized form)===

	~~Description: Structure of fRMsr of Staphylococcus aureus (oxidized form)~~

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Dec 9 14~~:44:~~18 2009~~''		==About this Structure==
			3KSH is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KSH OCA].
			[[Category: Staphylococcus aureus]]
			[[Category: Bong, S M.]]
			[[Category: Chi, Y M.]]
			[[Category: Free-met-r-so]]
			[[Category: Frmsr]]
			[[Category: Oxidoreductase]]

			''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 26 08:32:31 2010''

OCA at 12:44, 9 December 2009

2009-12-09T12:44:19Z

← Older revision		Revision as of 12:44, 9 December 2009
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 3ksh is ON HOLD		The entry 3ksh is ON HOLD until May 23 2011

	Authors: Bong, S.M., Chi, Y.M.		Authors: Bong, S.M., Chi, Y.M.
Line 7:		Line 7:
	Description: Structure of fRMsr of Staphylococcus aureus (oxidized form)		Description: Structure of fRMsr of Staphylococcus aureus (oxidized form)

	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec ~~2 09~~:39:32 2009''		''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 9 14:44:18 2009''