3ocr - Revision history

OCA at 08:05, 9 October 2024

2024-10-09T08:05:26Z

← Older revision		Revision as of 08:05, 9 October 2024
Line 1:		Line 1:

	==Crystal structure of aldolase II superfamily protein from Pseudomonas syringae==		==Crystal structure of aldolase II superfamily protein from Pseudomonas syringae==
	<StructureSection load='3ocr' size='340' side='right' caption='[[3ocr]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='3ocr' size='340' side='right'caption='[[3ocr]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3ocr]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Pse14 Pse14~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3OCR FirstGlance]. <br>		<table><tr><td colspan='2'>[[3ocr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_savastanoi_pv._phaseolicola_1448A Pseudomonas savastanoi pv. phaseolicola 1448A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OCR FirstGlance]. <br>
	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=SO4:SULFATE+ION'>SO4</scene~~></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.95Å</td></tr>
	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene><~~/td></tr>~~		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">PSPPH_2884 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264730 PSE14])~~</td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ocr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ocr OCA], [https://pdbe.org/3ocr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ocr RCSB], [https://www.ebi.ac.uk/pdbsum/3ocr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ocr ProSAT]</span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ocr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ocr OCA], [~~http~~://pdbe.org/3ocr PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ocr RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ocr PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ocr ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/Q48HR6_PSE14 Q48HR6_PSE14]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/3ocr_consurf.spt"</scriptWhenChecked>		<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/3ocr_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/~~initialview01~~.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ocr ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ocr ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

			==See Also==
			*[[Aldolase 3D structures\|Aldolase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Pse14~~]]		[[Category: Large Structures]]
	[[Category: Chang, C]]		[[Category: Pseudomonas savastanoi pv. phaseolicola 1448A]]
	[[Category: Edwards, A]]		[[Category: Chang C]]
	[[Category: Joachimiak, A]]		[[Category: Edwards A]]
	[[Category: Kagan, O]]		[[Category: Joachimiak A]]
	~~[[Category: Structural genomic~~]]		[[Category: Kagan O]]
	[[Category: Savchenko, A]]		[[Category: Savchenko A]]
	~~[[Category: Lyase]]~~
	~~[[Category: Mcsg]]~~
	~~[[Category: PSI, Protein structure initiative~~]]

OCA at 08:43, 8 November 2017

2017-11-08T08:43:10Z

← Older revision		Revision as of 08:43, 8 November 2017
Line 19:		Line 19:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ocr ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ocr ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

	~~==See Also==~~
	*[[Aldolase\|Aldolase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 03:52, 10 December 2016

2016-12-10T03:52:51Z

← Older revision		Revision as of 03:52, 10 December 2016
Line 1:		Line 1:

	==Crystal structure of aldolase II superfamily protein from Pseudomonas syringae==		==Crystal structure of aldolase II superfamily protein from Pseudomonas syringae==
	<StructureSection load='3ocr' size='340' side='right' caption='[[3ocr]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='3ocr' size='340' side='right' caption='[[3ocr]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3ocr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OCR FirstGlance]. <br>		<table><tr><td colspan='2'>[[3ocr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pse14 Pse14]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OCR FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PSPPH_2884 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264730 ~~Pseudomonas syringae pv. phaseolicola 1448A~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PSPPH_2884 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264730 PSE14])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ocr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ocr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ocr RCSB], [http://www.ebi.ac.uk/pdbsum/3ocr PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ocr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ocr OCA], [http://pdbe.org/3ocr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ocr RCSB], [http://www.ebi.ac.uk/pdbsum/3ocr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ocr ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ocr ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

Line 23:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Pseudomonas syringae pv. phaseolicola 1448a~~]]		[[Category: Pse14]]
	[[Category: Chang, C]]		[[Category: Chang, C]]
	[[Category: Edwards, A]]		[[Category: Edwards, A]]

OCA at 11:41, 9 December 2014

2014-12-09T11:41:53Z

← Older revision		Revision as of 11:41, 9 December 2014
Line 1:		Line 1:
	~~[[Image:3ocr.png\|left\|200px]]~~		==Crystal structure of aldolase II superfamily protein from Pseudomonas syringae==
			<StructureSection load='3ocr' size='340' side='right' caption='[[3ocr]], [[Resolution\|resolution]] 1.95Å' scene=''>
	~~{{STRUCTURE_3ocr\| PDB=3ocr \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[3ocr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OCR FirstGlance]. <br>
	===Crystal structure of aldolase II superfamily protein from Pseudomonas syringae===		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
			<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PSPPH_2884 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264730 Pseudomonas syringae pv. phaseolicola 1448A])</td></tr>
	==~~About this Structure~~==		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ocr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ocr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ocr RCSB], [http://www.ebi.ac.uk/pdbsum/3ocr PDBsum]</span></td></tr>
	[[3ocr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA].		</table>
			== Evolutionary Conservation ==
			[[Image:Consurf_key_small.gif\|200px\|right]]
			Check<jmol>
			<jmolCheckbox>
			<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oc/3ocr_consurf.spt"</scriptWhenChecked>
			<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
			<text>to colour the structure by Evolutionary Conservation</text>
			</jmolCheckbox>
			</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
			<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Aldolase\|Aldolase]]		*[[Aldolase\|Aldolase]]
			__TOC__
			</StructureSection>
	[[Category: Pseudomonas syringae pv. phaseolicola 1448a]]		[[Category: Pseudomonas syringae pv. phaseolicola 1448a]]
	[[Category: Chang, C.]]		[[Category: Chang, C]]
	[[Category: Edwards, A.]]		[[Category: Edwards, A]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A]]
	[[Category: Kagan, O.]]		[[Category: Kagan, O]]
	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]		[[Category: Structural genomic]]
	[[Category: Savchenko, A.]]		[[Category: Savchenko, A]]
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
	[[Category: ~~Midwest center for structural genomic]]~~		[[Category: PSI, Protein structure initiative]]
	~~[[Category:~~ Protein structure initiative]]
	~~[[Category: Psi-2~~]]

OCA at 16:40, 20 October 2012

2012-10-20T16:40:35Z

← Older revision		Revision as of 16:40, 20 October 2012
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
	[[3ocr]] is a 2 chain structure ~~of [[Aldolase]]~~ with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA].		[[3ocr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA].

	==See Also==		==See Also==

OCA: Protected "3ocr" [edit=sysop:move=sysop]

2012-07-26T22:28:51Z

Protected "3ocr" [edit=sysop:move=sysop]

← Older revision	Revision as of 22:28, 26 July 2012
(No difference)

OCA at 22:28, 26 July 2012

2012-07-26T22:28:49Z

← Older revision		Revision as of 22:28, 26 July 2012
Line 1:		Line 1:
	~~{{Seed}}~~		[[Image:3ocr.png\|left\|200px]]
	[[Image:3ocr.~~jpg~~\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_3ocr", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_3ocr\| PDB=3ocr \| SCENE= }}		{{STRUCTURE_3ocr\| PDB=3ocr \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
	~~3OCR~~ is a 2 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA].		[[3ocr]] is a 2 chain structure of [[Aldolase]] with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OCR OCA].

			==See Also==
			*[[Aldolase\|Aldolase]]
	[[Category: Pseudomonas syringae pv. phaseolicola 1448a]]		[[Category: Pseudomonas syringae pv. phaseolicola 1448a]]
	[[Category: Chang, C.]]		[[Category: Chang, C.]]
Line 27:		Line 23:
	[[Category: Protein structure initiative]]		[[Category: Protein structure initiative]]
	[[Category: Psi-2]]		[[Category: Psi-2]]

	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 25 09:03:50 2010''~~

OCA at 04:56, 25 August 2010

2010-08-25T04:56:01Z

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
+{{Seed}}
-The entry 3ocr is ON HOLD
+<!--
-Authors: Chang, C., Kagan, O., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
+===Crystal structure of aldolase II superfamily protein from Pseudomonas syringae===
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 18 11:26:55 2010''
+==About this Structure==

OCA: New page: '''Unreleased structure''' The entry 3ocr is ON HOLD Authors: Chang, C., Kagan, O., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Descriptio...

2010-08-18T07:19:21Z

New page: '''Unreleased structure''' The entry 3ocr is ON HOLD Authors: Chang, C., Kagan, O., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Descriptio...

New page

'''Unreleased structure'''

The entry 3ocr is ON HOLD

Authors: Chang, C., Kagan, O., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Description: Crystal structure of aldolase II superfamily protein from Pseudomonas syringae

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 18 11:26:55 2010''