3vmf - Revision history

OCA at 12:26, 8 November 2023

2023-11-08T12:26:51Z

← Older revision		Revision as of 12:26, 8 November 2023
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	<StructureSection load='3vmf' size='340' side='right'caption='[[3vmf]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='3vmf' size='340' side='right'caption='[[3vmf]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3vmf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Aerpe Aerpe~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VMF FirstGlance]. <br>		<table><tr><td colspan='2'>[[3vmf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VMF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, APE_1844 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE]), prf1, APE_1988.1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE])</td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [https://pdbe.org/3vmf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [https://www.ebi.ac.uk/pdbsum/3vmf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vmf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [https://pdbe.org/3vmf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [https://www.ebi.ac.uk/pdbsum/3vmf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vmf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis ~~(By similarity). [[https://www.uniprot.org/uniprot/RF1_AERPE RF1_AERPE]] Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA~~ (By similarity).		[https://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Aerpe~~]]		[[Category: Aeropyrum pernix K1]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Ishitani, R]]		[[Category: Ishitani R]]
	[[Category: Ito, K]]		[[Category: Ito K]]
	[[Category: Kobayashi, K]]		[[Category: Kobayashi K]]
	[[Category: Nureki, O]]		[[Category: Nureki O]]
	[[Category: Saito, K]]		[[Category: Saito K]]
	~~[[Category: Translation]]~~
	~~[[Category: Translation termination~~]]

OCA at 18:52, 27 July 2022

2022-07-27T18:52:42Z

← Older revision		Revision as of 18:52, 27 July 2022
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	==Archaeal protein==		==Archaeal protein==
	<StructureSection load='3vmf' size='340' side='right' caption='[[3vmf]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='3vmf' size='340' side='right'caption='[[3vmf]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3vmf]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Aerpe Aerpe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3VMF FirstGlance]. <br>		<table><tr><td colspan='2'>[[3vmf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aerpe Aerpe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VMF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, APE_1844 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE]), prf1, APE_1988.1 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, APE_1844 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE]), prf1, APE_1988.1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [~~http~~://pdbe.org/3vmf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3vmf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3vmf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [https://pdbe.org/3vmf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [https://www.ebi.ac.uk/pdbsum/3vmf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vmf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity). [[~~http~~://www.uniprot.org/uniprot/RF1_AERPE RF1_AERPE]] Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (By similarity).		[[https://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity). [[https://www.uniprot.org/uniprot/RF1_AERPE RF1_AERPE]] Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 21:

	==See Also==		==See Also==
	*[[Elongation factor\|Elongation factor]]		*[[Elongation factor 3D structures\|Elongation factor 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 27:		Line 27:
	</StructureSection>		</StructureSection>
	[[Category: Aerpe]]		[[Category: Aerpe]]
			[[Category: Large Structures]]
	[[Category: Ishitani, R]]		[[Category: Ishitani, R]]
	[[Category: Ito, K]]		[[Category: Ito, K]]

OCA at 16:33, 4 August 2016

2016-08-04T16:33:13Z

← Older revision		Revision as of 16:33, 4 August 2016
Line 1:		Line 1:

	==Archaeal protein==		==Archaeal protein==
	<StructureSection load='3vmf' size='340' side='right' caption='[[3vmf]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='3vmf' size='340' side='right' caption='[[3vmf]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3vmf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aeropyrum_pernix_k1 Aeropyrum pernix k1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VMF FirstGlance]. <br>		<table><tr><td colspan='2'>[[3vmf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aerpe Aerpe]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VMF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, APE_1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 ~~Aeropyrum pernix K1~~]), prf1, APE_1988.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 ~~Aeropyrum pernix K1~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, APE_1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE]), prf1, APE_1988.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 AERPE])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [http://www.ebi.ac.uk/pdbsum/3vmf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [http://pdbe.org/3vmf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [http://www.ebi.ac.uk/pdbsum/3vmf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vmf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 3vmf" style="background-color:#fffaf0;"></div>

			==See Also==
			*[[Elongation factor\|Elongation factor]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Aeropyrum pernix k1~~]]		[[Category: Aerpe]]
	[[Category: Ishitani, R]]		[[Category: Ishitani, R]]
	[[Category: Ito, K]]		[[Category: Ito, K]]

OCA at 17:04, 24 December 2014

2014-12-24T17:04:02Z

← Older revision		Revision as of 17:04, 24 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [http://www.ebi.ac.uk/pdbsum/3vmf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [http://www.ebi.ac.uk/pdbsum/3vmf PDBsum]</span></td></tr>
	</table>		</table>
			== Function ==
			[[http://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity). [[http://www.uniprot.org/uniprot/RF1_AERPE RF1_AERPE]] Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 07:23, 21 December 2014

2014-12-21T07:23:08Z

← Older revision		Revision as of 07:23, 21 December 2014
Line 1:		Line 1:
	~~{{STRUCTURE_3vmf~~\| ~~PDB~~=3vmf \| ~~SCENE~~= }}		==Archaeal protein==
	===~~Archaeal protein~~===		<StructureSection load='3vmf' size='340' side='right' caption='[[3vmf]], [[Resolution\|resolution]] 2.30Å' scene=''>
	~~{{ABSTRACT_PUBMED_22772989}}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[3vmf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix_k1 Aeropyrum pernix k1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VMF FirstGlance]. <br>
			</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">tuf, APE_1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 Aeropyrum pernix K1]), prf1, APE_1988.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272557 Aeropyrum pernix K1])</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vmf RCSB], [http://www.ebi.ac.uk/pdbsum/3vmf PDBsum]</span></td></tr>
			</table>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			When a stop codon appears at the ribosomal A site, the class I and II release factors (RFs) terminate translation. In eukaryotes and archaea, the class I and II RFs form a heterodimeric complex, and complete the overall translation termination process in a GTP-dependent manner. However, the structural mechanism of the translation termination by the class I and II RF complex remains unresolved. In archaea, archaeal elongation factor 1 alpha (aEF1alpha), a carrier GTPase for tRNA, acts as a class II RF by forming a heterodimeric complex with archaeal RF1 (aRF1). We report the crystal structure of the aRF1.aEF1alpha complex, the first active class I and II RF complex. This structure remarkably resembles the tRNA.EF-Tu complex, suggesting that aRF1 is efficiently delivered to the ribosomal A site, by mimicking tRNA. It provides insights into the mechanism that couples GTP hydrolysis by the class II RF to stop codon recognition and peptidyl-tRNA hydrolysis by the class I RF. We discuss the different mechanisms by which aEF1alpha recognizes aRF1 and aPelota, another aRF1-related protein and molecular evolution of the three functions of aEF1alpha.

	~~==Function==~~		Structural basis for translation termination by archaeal RF1 and GTP-bound EF1alpha complex.,Kobayashi K, Saito K, Ishitani R, Ito K, Nureki O Nucleic Acids Res. 2012 Jul 5. PMID:22772989<ref>PMID:22772989</ref>
	~~[[http://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE]] This protein promotes the~~ GTP-~~dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity)~~. ~~[[http://www~~.~~uniprot~~.~~org/uniprot~~/~~RF1_AERPE RF1_AERPE]] Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (By similarity).~~

	~~==About this Structure==~~		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	~~[[3vmf]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Aeropyrum_pernix_k1 Aeropyrum pernix k1]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA].~~		</div>
			== References ==
	==~~Reference~~==		<references/>
	~~<ref group="xtra">PMID:022772989</ref>~~<references ~~group="xtra"~~/><~~references~~/>		__TOC__
			</StructureSection>
	[[Category: Aeropyrum pernix k1]]		[[Category: Aeropyrum pernix k1]]
	[[Category: Ishitani, R.]]		[[Category: Ishitani, R]]
	[[Category: Ito, K.]]		[[Category: Ito, K]]
	[[Category: Kobayashi, K.]]		[[Category: Kobayashi, K]]
	[[Category: Nureki, O.]]		[[Category: Nureki, O]]
	[[Category: Saito, K.]]		[[Category: Saito, K]]
	[[Category: Translation]]		[[Category: Translation]]
	[[Category: Translation termination]]		[[Category: Translation termination]]

OCA at 07:40, 30 June 2013

2013-06-30T07:40:51Z

← Older revision		Revision as of 07:40, 30 June 2013
Line 1:		Line 1:
	~~[[Image:3vmf.jpg\|left\|200px]]~~

	{{STRUCTURE_3vmf\| PDB=3vmf \| SCENE= }}		{{STRUCTURE_3vmf\| PDB=3vmf \| SCENE= }}

	===Archaeal protein===		===Archaeal protein===
			{{ABSTRACT_PUBMED_22772989}}

	~~{{ABSTRACT_PUBMED_22772989}}~~		==Function==
			[[http://www.uniprot.org/uniprot/EF1A_AERPE EF1A_AERPE]] This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity). [[http://www.uniprot.org/uniprot/RF1_AERPE RF1_AERPE]] Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (By similarity).

	==About this Structure==		==About this Structure==
	[[3vmf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aeropyrum_pernix~~ Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA].		[[3vmf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix_k1 Aeropyrum pernix k1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA].

	==Reference==		==Reference==
	<ref group="xtra">PMID:022772989</ref><references group="xtra"/>		<ref group="xtra">PMID:022772989</ref><references group="xtra"/><references/>
	[[Category: Aeropyrum pernix]]		[[Category: Aeropyrum pernix k1]]
	[[Category: Ishitani, R.]]		[[Category: Ishitani, R.]]
	[[Category: Ito, K.]]		[[Category: Ito, K.]]

OCA at 07:07, 25 July 2012

2012-07-25T07:07:15Z

← Older revision		Revision as of 07:07, 25 July 2012
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	~~'''Unreleased structure'''~~		[[Image:3vmf.jpg\|left\|200px]]

	~~The entry~~ 3vmf ~~is ON HOLD~~ ~~until Paper Publication~~		{{STRUCTURE_3vmf\| PDB=3vmf \| SCENE= }}

	~~Authors: Kobayashi, K., Saito, K., Ishitani, R., Ito, K., Nureki, O.~~		===Archaeal protein===

	~~Description~~: ~~Archaeal protein~~		{{ABSTRACT_PUBMED_22772989}}

			==About this Structure==
			[[3vmf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMF OCA].

			==Reference==
			<ref group="xtra">PMID:022772989</ref><references group="xtra"/>
			[[Category: Aeropyrum pernix]]
			[[Category: Ishitani, R.]]
			[[Category: Ito, K.]]
			[[Category: Kobayashi, K.]]
			[[Category: Nureki, O.]]
			[[Category: Saito, K.]]
			[[Category: Translation]]
			[[Category: Translation termination]]

OCA at 08:16, 29 February 2012

2012-02-29T08:16:38Z

← Older revision		Revision as of 08:16, 29 February 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 3vmf is ON HOLD		The entry 3vmf is ON HOLD until Paper Publication

	Authors: Kobayashi, K., Saito, K., Ishitani, R., Ito, K., Nureki, O.		Authors: Kobayashi, K., Saito, K., Ishitani, R., Ito, K., Nureki, O.

	Description: Archaeal protein		Description: Archaeal protein

OCA at 05:49, 4 January 2012

2012-01-04T05:49:44Z

← Older revision		Revision as of 05:49, 4 January 2012
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	The entry 3vmf is ON HOLD		The entry 3vmf is ON HOLD

	Authors: Kobayashi, K, Saito, K, Ishitani, R, Ito, K, Nureki, O		Authors: Kobayashi, K., Saito, K., Ishitani, R., Ito, K., Nureki, O.

	Description: Archaeal protein		Description: Archaeal protein

OCA: Protected "3vmf" [edit=sysop:move=sysop]

2011-12-28T06:57:09Z

Protected "3vmf" [edit=sysop:move=sysop]

← Older revision	Revision as of 06:57, 28 December 2011
(No difference)