4dfd - Revision history

OCA at 14:34, 14 March 2024

2024-03-14T14:34:13Z

← Older revision		Revision as of 14:34, 14 March 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dfd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DFD FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dfd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DFD FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
			<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfd OCA], [https://pdbe.org/4dfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dfd RCSB], [https://www.ebi.ac.uk/pdbsum/4dfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dfd ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfd OCA], [https://pdbe.org/4dfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dfd RCSB], [https://www.ebi.ac.uk/pdbsum/4dfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dfd ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/Q8A4Q5_BACTN Q8A4Q5_BACTN]]		[https://www.uniprot.org/uniprot/Q8A4Q5_BACTN Q8A4Q5_BACTN]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 08:15, 21 September 2022

2022-09-21T08:15:36Z

← Older revision		Revision as of 08:15, 21 September 2022
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	==Crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, magnesium complex==		==Crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, magnesium complex==
	<StructureSection load='4dfd' size='340' side='right' caption='[[4dfd]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='4dfd' size='340' side='right'caption='[[4dfd]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dfd]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"bacillus_thetaiotaomicron"_distaso_1912 "bacillus~~ thetaiotaomicron~~" distaso 1912~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFD OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4DFD FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dfd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DFD FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene>~~</td></tr>~~		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4dcc\|4dcc]]</td></tr>~~		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfd OCA], [https://pdbe.org/4dfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dfd RCSB], [https://www.ebi.ac.uk/pdbsum/4dfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dfd ProSAT]</span></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BT_2542 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 "Bacillus thetaiotaomicron" Distaso 1912])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4dfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfd OCA], [~~http~~://pdbe.org/4dfd PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4dfd RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4dfd PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4dfd ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[[https://www.uniprot.org/uniprot/Q8A4Q5_BACTN Q8A4Q5_BACTN]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Bacillus~~ thetaiotaomicron ~~distaso 1912~~]]		[[Category: Bacteroides thetaiotaomicron]]
	[[Category: Allen, K]]		[[Category: Large Structures]]
	[[Category: Almo~~, S C~~]]		[[Category: Allen K]]
	[[Category: Bhosle, R]]		[[Category: Almo SC]]
	[[Category: Chowdhury, S]]		[[Category: Bhosle R]]
	[[Category: Dunaway-Mariano, D]]		[[Category: Chowdhury S]]
	~~[[Category: EFI, Enzyme Function Initiative~~]]		[[Category: Dunaway-Mariano D]]
	[[Category: Evans, B]]		[[Category: Evans B]]
	[[Category: Gerlt~~, J A]]~~		[[Category: Gerlt JA]]
	~~[[Category: Glenn, A Scott~~]]		[[Category: Hammonds J]]
	[[Category: Hammonds, J]]		[[Category: Hillerich B]]
	[[Category: Hillerich, B]]		[[Category: Imker HJ]]
	[[Category: Imker~~, H J~~]]		[[Category: Patskovsky Y]]
	[[Category: Patskovsky, Y]]		[[Category: Scott Glenn A]]
	[[Category: ~~Seidel, R D~~]]		[[Category: Seidel RD]]
	[[Category: ~~Toro, R~~]]		[[Category: Toro R]]
	[[Category: ~~Washington, E~~]]		[[Category: Washington E]]
	[[Category: ~~Zencheck, W D~~]]		[[Category: Zencheck WD]]
	[[Category: ~~Enzyme function initiative]]~~
	~~[[Category: Hydrolase]]~~
	~~[[Category: Magnesium binding site]]~~
	~~[[Category: Structural genomic~~]]

OCA at 19:50, 24 January 2018

2018-01-24T19:50:16Z

← Older revision		Revision as of 19:50, 24 January 2018
Line 17:		Line 17:
	[[Category: Chowdhury, S]]		[[Category: Chowdhury, S]]
	[[Category: Dunaway-Mariano, D]]		[[Category: Dunaway-Mariano, D]]
	[[Category: ~~Efi~~, Enzyme Function Initiative]]		[[Category: EFI, Enzyme Function Initiative]]
	[[Category: Evans, B]]		[[Category: Evans, B]]
	[[Category: Gerlt, J A]]		[[Category: Gerlt, J A]]
Line 32:		Line 32:
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Magnesium binding site]]		[[Category: Magnesium binding site]]
			[[Category: Structural genomic]]

OCA at 17:24, 11 August 2016

2016-08-11T17:24:52Z

← Older revision		Revision as of 17:24, 11 August 2016
Line 1:		Line 1:

	==Crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, magnesium complex==		==Crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, magnesium complex==
	<StructureSection load='4dfd' size='340' side='right' caption='[[4dfd]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='4dfd' size='340' side='right' caption='[[4dfd]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dfd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacteroides_thetaiotaomicron Bacteroides~~ thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DFD FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dfd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_thetaiotaomicron"_distaso_1912 "bacillus thetaiotaomicron" distaso 1912]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DFD FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4dcc\|4dcc]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4dcc\|4dcc]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BT_2542 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 ~~Bacteroides~~ thetaiotaomicron])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BT_2542 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 "Bacillus thetaiotaomicron" Distaso 1912])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dfd RCSB], [http://www.ebi.ac.uk/pdbsum/4dfd PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfd OCA], [http://pdbe.org/4dfd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dfd RCSB], [http://www.ebi.ac.uk/pdbsum/4dfd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dfd ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Bacteroides~~ thetaiotaomicron]]		[[Category: Bacillus thetaiotaomicron distaso 1912]]
	[[Category: Allen, K]]		[[Category: Allen, K]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]

OCA at 14:17, 4 January 2015

2015-01-04T14:17:46Z

← Older revision		Revision as of 14:17, 4 January 2015
Line 1:		Line 1:
	~~[[Image:4dfd.png\|left\|200px]]~~		==Crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, magnesium complex==
			<StructureSection load='4dfd' size='340' side='right' caption='[[4dfd]], [[Resolution\|resolution]] 2.00Å' scene=''>
	~~{{STRUCTURE_4dfd\| PDB=4dfd \| SCENE= }}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[4dfd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DFD FirstGlance]. <br>
	===Crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, magnesium complex===		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
			<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4dcc\|4dcc]]</td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BT_2542 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=818 Bacteroides thetaiotaomicron])</td></tr>
	==~~About this Structure~~==		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dfd RCSB], [http://www.ebi.ac.uk/pdbsum/4dfd PDBsum]</span></td></tr>
	[[4dfd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFD OCA].		</table>
			__TOC__
			</StructureSection>
	[[Category: Bacteroides thetaiotaomicron]]		[[Category: Bacteroides thetaiotaomicron]]
	[[Category: Allen, K.]]		[[Category: Allen, K]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C]]
	[[Category: Bhosle, R.]]		[[Category: Bhosle, R]]
	[[Category: Chowdhury, S.]]		[[Category: Chowdhury, S]]
	[[Category: Dunaway-Mariano, D.]]		[[Category: Dunaway-Mariano, D]]
	[[Category: Efi, Enzyme Function Initiative.]]		[[Category: Efi, Enzyme Function Initiative]]
	[[Category: Evans, B.]]		[[Category: Evans, B]]
	[[Category: Gerlt, J A.]]		[[Category: Gerlt, J A]]
	[[Category: Glenn, A Scott.]]		[[Category: Glenn, A Scott]]
	[[Category: Hammonds, J.]]		[[Category: Hammonds, J]]
	[[Category: Hillerich, B.]]		[[Category: Hillerich, B]]
	[[Category: Imker, H J.]]		[[Category: Imker, H J]]
	[[Category: Patskovsky, Y.]]		[[Category: Patskovsky, Y]]
	[[Category: Seidel, R D.]]		[[Category: Seidel, R D]]
	[[Category: Toro, R.]]		[[Category: Toro, R]]
	[[Category: Washington, E.]]		[[Category: Washington, E]]
	[[Category: Zencheck, W D.]]		[[Category: Zencheck, W D]]
	[[Category: Enzyme function initiative]]		[[Category: Enzyme function initiative]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Magnesium binding site]]		[[Category: Magnesium binding site]]

OCA at 10:28, 8 August 2012

2012-08-08T10:28:40Z

← Older revision		Revision as of 10:28, 8 August 2012
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	[[Image:4dfd.png\|left\|200px]]		[[Image:4dfd.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_4dfd", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_4dfd\| PDB=4dfd \| SCENE= }}		{{STRUCTURE_4dfd\| PDB=4dfd \| SCENE= }}

OCA: Protected "4dfd" [edit=sysop:move=sysop]

2012-03-08T05:09:55Z

Protected "4dfd" [edit=sysop:move=sysop]

← Older revision	Revision as of 05:09, 8 March 2012
(No difference)

4dfd - Revision history

OCA at 14:34, 14 March 2024

OCA at 08:15, 21 September 2022

OCA at 19:50, 24 January 2018

OCA at 17:24, 11 August 2016

OCA at 14:17, 4 January 2015

OCA at 10:28, 8 August 2012

OCA: Protected "4dfd" [edit=sysop:move=sysop]

OCA: New page: 200px