4dhd - Revision history

OCA at 14:35, 14 March 2024

2024-03-14T14:35:33Z

← Older revision		Revision as of 14:35, 14 March 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dhd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrobaculum_calidifontis_JCM_11548 Pyrobaculum calidifontis JCM 11548]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DHD FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dhd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrobaculum_calidifontis_JCM_11548 Pyrobaculum calidifontis JCM 11548]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DHD FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.65Å</td></tr>
			<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dhd OCA], [https://pdbe.org/4dhd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dhd RCSB], [https://www.ebi.ac.uk/pdbsum/4dhd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dhd ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dhd OCA], [https://pdbe.org/4dhd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dhd RCSB], [https://www.ebi.ac.uk/pdbsum/4dhd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dhd ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/A3MSH1_PYRCJ A3MSH1_PYRCJ]]		[https://www.uniprot.org/uniprot/A3MSH1_PYRCJ A3MSH1_PYRCJ]
	~~<div style="background-color:#fffaf0;">~~
	~~== Publication Abstract from PubMed ==~~
	The number of available protein sequences has increased exponentially with the advent of high-throughput genomic sequencing, creating a significant challenge for functional annotation. Here, we describe a large-scale study on assigning function to unknown members of the trans-polyprenyl transferase (E-PTS) subgroup in the isoprenoid synthase superfamily, which provides substrates for the biosynthesis of the more than 55,000 isoprenoid metabolites. Although the mechanism for determining the product chain length for these enzymes is known, there is no simple relationship between function and primary sequence, so that assigning function is challenging. We addressed this challenge through large-scale bioinformatics analysis of >5,000 putative polyprenyl transferases; experimental characterization of the chain-length specificity of 79 diverse members of this group; determination of 27 structures of 19 of these enzymes, including seven cocrystallized with substrate analogs or products; and the development and successful application of a computational approach to predict function that leverages available structural data through homology modeling and docking of possible products into the active site. The crystallographic structures and computational structural models of the enzyme-ligand complexes elucidate the structural basis of specificity. As a result of this study, the percentage of E-PTS sequences similar to functionally annotated ones (BLAST e-value </= 1e-70) increased from 40.6 to 68.8%, and the percentage of sequences similar to available crystal structures increased from 28.9 to 47.4%. The high accuracy of our blind prediction of newly characterized enzymes indicates the potential to predict function to the complete polyprenyl transferase subgroup of the isoprenoid synthase superfamily computationally.

	Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.,Wallrapp FH, Pan JJ, Ramamoorthy G, Almonacid DE, Hillerich BS, Seidel R, Patskovsky Y, Babbitt PC, Almo SC, Jacobson MP, Poulter CD Proc Natl Acad Sci U S A. 2013 Mar 14. PMID:23493556<ref>PMID:23493556</ref>

	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~
	~~</div>~~
	~~<div class="pdbe-citations 4dhd" style="background-color:#fffaf0;"></div>~~
	~~== References ==~~
	~~<references/>~~
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 08:18, 21 September 2022

2022-09-21T08:18:22Z

← Older revision		Revision as of 08:18, 21 September 2022
Line 1:		Line 1:

	==Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis==		==Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis==
	<StructureSection load='4dhd' size='340' side='right' caption='[[4dhd]], [[Resolution\|resolution]] 1.65Å' scene=''>		<StructureSection load='4dhd' size='340' side='right'caption='[[4dhd]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dhd]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Pyrcj Pyrcj~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4DHD FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dhd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrobaculum_calidifontis_JCM_11548 Pyrobaculum calidifontis JCM 11548]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DHD FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>~~</td></tr>~~		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Pcal_0150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=410359 PYRCJ])~~</td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dhd OCA], [https://pdbe.org/4dhd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dhd RCSB], [https://www.ebi.ac.uk/pdbsum/4dhd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dhd ProSAT]</span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4dhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dhd OCA], [~~http~~://pdbe.org/4dhd PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4dhd RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4dhd PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4dhd ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[[https://www.uniprot.org/uniprot/A3MSH1_PYRCJ A3MSH1_PYRCJ]]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Pyrcj~~]]		[[Category: Large Structures]]
	[[Category: ~~Almo, S C~~]]		[[Category: Pyrobaculum calidifontis JCM 11548]]
	[[Category: ~~Bhosle, R~~]]		[[Category: Almo SC]]
	[[Category: ~~Chowdhury, S~~]]		[[Category: Bhosle R]]
	[[Category: ~~EFI, Enzyme Function Initiative~~]]		[[Category: Chowdhury S]]
	[[Category: Evans, B]]		[[Category: Evans B]]
	[[Category: Gerlt~~, J A]]~~		[[Category: Gerlt JA]]
	~~[[Category: Glenn, A Scott~~]]		[[Category: Hammonds J]]
	[[Category: Hammonds, J]]		[[Category: Hillerich B]]
	[[Category: Hillerich, B]]		[[Category: Imker HJ]]
	[[Category: Imker~~, H J~~]]		[[Category: Patskovsky Y]]
	[[Category: Patskovsky, Y]]		[[Category: Poulter CD]]
	[[Category: Poulter~~, C D~~]]		[[Category: Scott Glenn A]]
	[[Category: ~~Seidel, R D~~]]		[[Category: Seidel RD]]
	[[Category: ~~Toro, R~~]]		[[Category: Toro R]]
	[[Category: ~~Washington, E~~]]		[[Category: Washington E]]
	[[Category: ~~Zencheck, W D~~]]		[[Category: Zencheck WD]]
	[[Category: ~~Isoprenoid diphosphate synthase]]~~
	~~[[Category: Isoprenoid synthesis]]~~
	~~[[Category: Structural genomic]]~~
	~~[[Category: Transferase~~]]

OCA at 19:50, 24 January 2018

2018-01-24T19:50:34Z

← Older revision		Revision as of 19:50, 24 January 2018
Line 25:		Line 25:
	[[Category: Bhosle, R]]		[[Category: Bhosle, R]]
	[[Category: Chowdhury, S]]		[[Category: Chowdhury, S]]
	[[Category: ~~Efi~~ , Enzyme Function Initiative]]		[[Category: EFI, Enzyme Function Initiative]]
	[[Category: Evans, B]]		[[Category: Evans, B]]
	[[Category: Gerlt, J A]]		[[Category: Gerlt, J A]]
Line 40:		Line 40:
	[[Category: Isoprenoid diphosphate synthase]]		[[Category: Isoprenoid diphosphate synthase]]
	[[Category: Isoprenoid synthesis]]		[[Category: Isoprenoid synthesis]]
			[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 13:54, 11 August 2016

2016-08-11T13:54:56Z

← Older revision		Revision as of 13:54, 11 August 2016
Line 1:		Line 1:

	==Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis==		==Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis==
	<StructureSection load='4dhd' size='340' side='right' caption='[[4dhd]], [[Resolution\|resolution]] 1.65Å' scene=''>		<StructureSection load='4dhd' size='340' side='right' caption='[[4dhd]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dhd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pyrobaculum_calidifontis_jcm_11548 Pyrobaculum calidifontis jcm 11548~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DHD FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dhd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrcj Pyrcj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DHD FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Pcal_0150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=410359 ~~Pyrobaculum calidifontis JCM 11548~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Pcal_0150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=410359 PYRCJ])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dhd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dhd RCSB], [http://www.ebi.ac.uk/pdbsum/4dhd PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dhd OCA], [http://pdbe.org/4dhd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dhd RCSB], [http://www.ebi.ac.uk/pdbsum/4dhd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dhd ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 15:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 4dhd" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Pyrobaculum calidifontis jcm 11548~~]]		[[Category: Pyrcj]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Bhosle, R]]		[[Category: Bhosle, R]]

OCA at 14:19, 4 January 2015

2015-01-04T14:19:46Z

← Older revision		Revision as of 14:19, 4 January 2015
Line 1:		Line 1:
	~~{{STRUCTURE_4dhd\| PDB=4dhd \| SCENE= }}~~		==Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis==
	===Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis===		<StructureSection load='4dhd' size='340' side='right' caption='[[4dhd]], [[Resolution\|resolution]] 1.65Å' scene=''>
	~~{{ABSTRACT_PUBMED_23493556}}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[4dhd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrobaculum_calidifontis_jcm_11548 Pyrobaculum calidifontis jcm 11548]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DHD FirstGlance]. <br>
			</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Pcal_0150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=410359 Pyrobaculum calidifontis JCM 11548])</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dhd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dhd RCSB], [http://www.ebi.ac.uk/pdbsum/4dhd PDBsum]</span></td></tr>
			</table>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			The number of available protein sequences has increased exponentially with the advent of high-throughput genomic sequencing, creating a significant challenge for functional annotation. Here, we describe a large-scale study on assigning function to unknown members of the trans-polyprenyl transferase (E-PTS) subgroup in the isoprenoid synthase superfamily, which provides substrates for the biosynthesis of the more than 55,000 isoprenoid metabolites. Although the mechanism for determining the product chain length for these enzymes is known, there is no simple relationship between function and primary sequence, so that assigning function is challenging. We addressed this challenge through large-scale bioinformatics analysis of >5,000 putative polyprenyl transferases; experimental characterization of the chain-length specificity of 79 diverse members of this group; determination of 27 structures of 19 of these enzymes, including seven cocrystallized with substrate analogs or products; and the development and successful application of a computational approach to predict function that leverages available structural data through homology modeling and docking of possible products into the active site. The crystallographic structures and computational structural models of the enzyme-ligand complexes elucidate the structural basis of specificity. As a result of this study, the percentage of E-PTS sequences similar to functionally annotated ones (BLAST e-value </= 1e-70) increased from 40.6 to 68.8%, and the percentage of sequences similar to available crystal structures increased from 28.9 to 47.4%. The high accuracy of our blind prediction of newly characterized enzymes indicates the potential to predict function to the complete polyprenyl transferase subgroup of the isoprenoid synthase superfamily computationally.

	~~==About this Structure==~~		Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.,Wallrapp FH, Pan JJ, Ramamoorthy G, Almonacid DE, Hillerich BS, Seidel R, Patskovsky Y, Babbitt PC, Almo SC, Jacobson MP, Poulter CD Proc Natl Acad Sci U S A. 2013 Mar 14. PMID:23493556<ref>PMID:23493556</ref>
	~~[[4dhd]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Pyrobaculum_calidifontis_jcm_11548 Pyrobaculum calidifontis jcm 11548]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin~~/~~ocashort?id=4DHD OCA].~~
			From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
			== References ==
			<references/>
			__TOC__
			</StructureSection>
	[[Category: Pyrobaculum calidifontis jcm 11548]]		[[Category: Pyrobaculum calidifontis jcm 11548]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C]]
	[[Category: Bhosle, R.]]		[[Category: Bhosle, R]]
	[[Category: Chowdhury, S.]]		[[Category: Chowdhury, S]]
	[[Category: Efi , Enzyme Function Initiative]]		[[Category: Efi , Enzyme Function Initiative]]
	[[Category: Evans, B.]]		[[Category: Evans, B]]
	[[Category: Gerlt, J A.]]		[[Category: Gerlt, J A]]
	[[Category: Glenn, A Scott.]]		[[Category: Glenn, A Scott]]
	[[Category: Hammonds, J.]]		[[Category: Hammonds, J]]
	[[Category: Hillerich, B.]]		[[Category: Hillerich, B]]
	[[Category: Imker, H J.]]		[[Category: Imker, H J]]
	[[Category: Patskovsky, Y.]]		[[Category: Patskovsky, Y]]
	[[Category: Poulter, C D.]]		[[Category: Poulter, C D]]
	[[Category: Seidel, R D.]]		[[Category: Seidel, R D]]
	[[Category: Toro, R.]]		[[Category: Toro, R]]
	[[Category: Washington, E.]]		[[Category: Washington, E]]
	[[Category: Zencheck, W D.]]		[[Category: Zencheck, W D]]
	[[Category: Isoprenoid diphosphate synthase]]		[[Category: Isoprenoid diphosphate synthase]]
	[[Category: Isoprenoid synthesis]]		[[Category: Isoprenoid synthesis]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 22:12, 3 April 2013

2013-04-03T22:12:08Z

← Older revision		Revision as of 22:12, 3 April 2013
Line 1:		Line 1:
	~~[[Image:4dhd.png\|left\|200px]]~~

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_4dhd", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_4dhd\| PDB=4dhd \| SCENE= }}		{{STRUCTURE_4dhd\| PDB=4dhd \| SCENE= }}

	===Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis===		===Crystal structure of isoprenoid synthase A3MSH1 (TARGET EFI-501992) from Pyrobaculum calidifontis===
			{{ABSTRACT_PUBMED_23493556}}

	==About this Structure==		==About this Structure==
	[[4dhd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pyrobaculum_calidifontis~~ Pyrobaculum calidifontis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA].		[[4dhd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrobaculum_calidifontis_jcm_11548 Pyrobaculum calidifontis jcm 11548]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DHD OCA].
	[[Category: Pyrobaculum calidifontis]]		[[Category: Pyrobaculum calidifontis jcm 11548]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
	[[Category: Bhosle, R.]]		[[Category: Bhosle, R.]]

OCA at 07:44, 29 February 2012

2012-02-29T07:44:49Z

← Older revision		Revision as of 07:44, 29 February 2012
Line 1:		Line 1:
	[[Image:4dhd.~~jpg~~\|left\|200px]]		[[Image:4dhd.png\|left\|200px]]

	<!--		<!--
Line 17:		Line 17:
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
	[[Category: Bhosle, R.]]		[[Category: Bhosle, R.]]
	[[Category: ~~Chowhurdy~~, S.]]		[[Category: Chowdhury, S.]]
	[[Category: Efi , Enzyme Function Initiative]]		[[Category: Efi , Enzyme Function Initiative]]
	[[Category: Evans, B.]]		[[Category: Evans, B.]]
	[[Category: Gerlt, J A.]]		[[Category: Gerlt, J A.]]
	[[Category: Glenn, A Scott.]]		[[Category: Glenn, A Scott.]]
	[[Category: ~~Hammond~~, J.]]		[[Category: Hammonds, J.]]
	[[Category: Hillerich, B.]]		[[Category: Hillerich, B.]]
	[[Category: Imker, H J.]]		[[Category: Imker, H J.]]

OCA: Protected "4dhd" [edit=sysop:move=sysop]

2012-02-08T06:47:28Z

Protected "4dhd" [edit=sysop:move=sysop]

← Older revision	Revision as of 06:47, 8 February 2012
(No difference)