4eaf - Revision history

OCA at 14:56, 14 March 2024

2024-03-14T14:56:47Z

← Older revision		Revision as of 14:56, 14 March 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4eaf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EAF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EAF FirstGlance]. <br>		<table><tr><td colspan='2'>[[4eaf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EAF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EAF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.55Å</td></tr>
			<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eaf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eaf OCA], [https://pdbe.org/4eaf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eaf RCSB], [https://www.ebi.ac.uk/pdbsum/4eaf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eaf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eaf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eaf OCA], [https://pdbe.org/4eaf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eaf RCSB], [https://www.ebi.ac.uk/pdbsum/4eaf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eaf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/TYPH_ECOLI TYPH_ECOLI]] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.		[https://www.uniprot.org/uniprot/TYPH_ECOLI TYPH_ECOLI] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 07:00, 28 September 2022

2022-09-28T07:00:09Z

← Older revision		Revision as of 07:00, 28 September 2022
Line 1:		Line 1:

	==Thymidine phosphorylase from E.coli==		==Thymidine phosphorylase from E.coli==
	<StructureSection load='4eaf' size='340' side='right' caption='[[4eaf]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='4eaf' size='340' side='right'caption='[[4eaf]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4eaf]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Ecoli Ecoli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EAF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4EAF FirstGlance]. <br>		<table><tr><td colspan='2'>[[4eaf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EAF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EAF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene~~></td></tr>~~		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ead\|4ead]]</td></tr>~~		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eaf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eaf OCA], [https://pdbe.org/4eaf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eaf RCSB], [https://www.ebi.ac.uk/pdbsum/4eaf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eaf ProSAT]</span></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">deoA, tpp, ttg, b4382, JW4345 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thymidine_phosphorylase Thymidine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.4 2.4.2.4] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4eaf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eaf OCA], [~~http~~://pdbe.org/4eaf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4eaf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4eaf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4eaf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[~~http~~://www.uniprot.org/uniprot/TYPH_ECOLI TYPH_ECOLI]] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.		[[https://www.uniprot.org/uniprot/TYPH_ECOLI TYPH_ECOLI]] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Ecoli~~]]		[[Category: Escherichia coli K-12]]
	[[Category: ~~Thymidine phosphorylase~~]]		[[Category: Large Structures]]
	[[Category: Abramchik~~, Y A~~]]		[[Category: Abramchik YA]]
	[[Category: Esipov~~, R S~~]]		[[Category: Esipov RS]]
	[[Category: Kuranova~~, I P~~]]		[[Category: Kuranova IP]]
	[[Category: Timofeev~~, V I]]~~		[[Category: Timofeev VI]]
	~~[[Category: Transferase~~]]

OCA at 18:30, 4 August 2016

2016-08-04T18:30:47Z

← Older revision		Revision as of 18:30, 4 August 2016
Line 1:		Line 1:

	==Thymidine phosphorylase from E.coli==		==Thymidine phosphorylase from E.coli==
	<StructureSection load='4eaf' size='340' side='right' caption='[[4eaf]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='4eaf' size='340' side='right' caption='[[4eaf]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4eaf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli_k-12 Escherichia coli k-12~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EAF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EAF FirstGlance]. <br>		<table><tr><td colspan='2'>[[4eaf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EAF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EAF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ead\|4ead]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ead\|4ead]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">deoA, tpp, ttg, b4382, JW4345 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ~~Escherichia coli K-12~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">deoA, tpp, ttg, b4382, JW4345 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thymidine_phosphorylase Thymidine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.4 2.4.2.4] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thymidine_phosphorylase Thymidine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.4 2.4.2.4] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eaf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eaf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4eaf RCSB], [http://www.ebi.ac.uk/pdbsum/4eaf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eaf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eaf OCA], [http://pdbe.org/4eaf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4eaf RCSB], [http://www.ebi.ac.uk/pdbsum/4eaf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4eaf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Escherichia coli k-12~~]]		[[Category: Ecoli]]
	[[Category: Thymidine phosphorylase]]		[[Category: Thymidine phosphorylase]]
	[[Category: Abramchik, Y A]]		[[Category: Abramchik, Y A]]

OCA at 18:13, 24 December 2014

2014-12-24T18:13:57Z

← Older revision		Revision as of 18:13, 24 December 2014
Line 1:		Line 1:
	~~{{STRUCTURE_4eaf~~\| ~~PDB~~=4eaf \| ~~SCENE~~= }}		==Thymidine phosphorylase from E.coli==
	===Thymidine phosphorylase ~~from E~~.~~coli~~===		<StructureSection load='4eaf' size='340' side='right' caption='[[4eaf]], [[Resolution\|resolution]] 1.55Å' scene=''>
			== Structural highlights ==
	==Function==		<table><tr><td colspan='2'>[[4eaf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EAF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EAF FirstGlance]. <br>
			</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
			<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4ead\|4ead]]</td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">deoA, tpp, ttg, b4382, JW4345 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K-12])</td></tr>
			<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thymidine_phosphorylase Thymidine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.4 2.4.2.4] </span></td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eaf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eaf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4eaf RCSB], [http://www.ebi.ac.uk/pdbsum/4eaf PDBsum]</span></td></tr>
			</table>
			== Function ==
	[[http://www.uniprot.org/uniprot/TYPH_ECOLI TYPH_ECOLI]] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.		[[http://www.uniprot.org/uniprot/TYPH_ECOLI TYPH_ECOLI]] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.
			__TOC__
	~~==About this Structure==~~		</StructureSection>
	[[4eaf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/~~ocashort?id=4EAF OCA].~~
	[[Category: Escherichia coli k-12]]		[[Category: Escherichia coli k-12]]
	[[Category: Thymidine phosphorylase]]		[[Category: Thymidine phosphorylase]]
	[[Category: Abramchik, Y A.]]		[[Category: Abramchik, Y A]]
	[[Category: Esipov, R S.]]		[[Category: Esipov, R S]]
	[[Category: Kuranova, I P.]]		[[Category: Kuranova, I P]]
	[[Category: Timofeev, V I~~.]]~~		[[Category: Timofeev, V I]]
	~~[[Category: Thymidine phosphorylase~~]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 08:58, 27 March 2013

2013-03-27T08:58:16Z

← Older revision		Revision as of 08:58, 27 March 2013
Line 1:		Line 1:
	~~'''Unreleased structure'''~~		{{STRUCTURE_4eaf\| PDB=4eaf \| SCENE= }}
			===Thymidine phosphorylase from E.coli===

	The ~~entry 4eaf is ON HOLD until Mar 22 2014~~		==Function==
			[[http://www.uniprot.org/uniprot/TYPH_ECOLI TYPH_ECOLI]] The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.

	~~Authors~~: ~~Timofeev, V~~.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.		==About this Structure==
			[[4eaf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EAF OCA].
	~~Description~~: Thymidine phosphorylase ~~from E.coli~~		[[Category: Escherichia coli k-12]]
			[[Category: Thymidine phosphorylase]]
			[[Category: Abramchik, Y A.]]
			[[Category: Esipov, R S.]]
			[[Category: Kuranova, I P.]]
			[[Category: Timofeev, V I.]]
			[[Category: Thymidine phosphorylase]]
			[[Category: Transferase]]

OCA at 05:46, 4 April 2012

2012-04-04T05:46:42Z

← Older revision		Revision as of 05:46, 4 April 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 4eaf is ON HOLD		The entry 4eaf is ON HOLD until Mar 22 2014

	Authors: Timofeev, V.I., Abramchik, Yu.A., Esipov, R.S., Kuranova, I.P.		Authors: Timofeev, V.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.

	Description: Thymidine phosphorylase from E.coli		Description: Thymidine phosphorylase from E.coli

OCA: Protected "4eaf" [edit=sysop:move=sysop]

2012-03-28T07:26:41Z

Protected "4eaf" [edit=sysop:move=sysop]

← Older revision	Revision as of 07:26, 28 March 2012
(No difference)

OCA: New page: '''Unreleased structure''' The entry 4eaf is ON HOLD Authors: Timofeev, V.I., Abramchik, Yu.A., Esipov, R.S., Kuranova, I.P. Description: Thymidine phosphorylase from E.coli

2012-03-28T07:26:40Z

New page: '''Unreleased structure''' The entry 4eaf is ON HOLD Authors: Timofeev, V.I., Abramchik, Yu.A., Esipov, R.S., Kuranova, I.P. Description: Thymidine phosphorylase from E.coli

New page

'''Unreleased structure'''

The entry 4eaf is ON HOLD

Authors: Timofeev, V.I., Abramchik, Yu.A., Esipov, R.S., Kuranova, I.P.

Description: Thymidine phosphorylase from E.coli