4eob - Revision history

OCA at 06:29, 17 October 2024

2024-10-17T06:29:35Z

← Older revision		Revision as of 06:29, 17 October 2024
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	</table>		</table>
	== Function ==		== Function ==
	[https://www.uniprot.org/uniprot/TSE1_PSEAE TSE1_PSEAE] Toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. Degrades peptidoglycan via amidase activity thereby helping itself to compete with other bacteria (PubMed:21776080, PubMed:~~22931054~~, PubMed:22813741, PubMed:~~22700987~~). To protect itself, the bacterium synthesizes immunity protein Tsi1 that specifically interacts with and inactivates cognate toxin (PubMed:21776080, PubMed:~~22931054~~, PubMed:~~22700987~~).<ref>PMID:21776080</ref> <ref>PMID:22700987</ref> <ref>PMID:22813741</ref> <ref>PMID:22931054</ref>		[https://www.uniprot.org/uniprot/TSE1_PSEAE TSE1_PSEAE] Toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. Degrades peptidoglycan via amidase activity thereby helping itself to compete with other bacteria (PubMed:21776080, PubMed:22700987, PubMed:22813741, PubMed:22931054). To protect itself, the bacterium synthesizes immunity protein Tsi1 that specifically interacts with and inactivates cognate toxin (PubMed:21776080, PubMed:22700987, PubMed:22931054).<ref>PMID:21776080</ref> <ref>PMID:22700987</ref> <ref>PMID:22813741</ref> <ref>PMID:22931054</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 00:36, 28 December 2023

2023-12-28T00:36:08Z

← Older revision		Revision as of 00:36, 28 December 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4eob]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EOB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EOB FirstGlance]. <br>		<table><tr><td colspan='2'>[[4eob]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EOB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EOB FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eob FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eob OCA], [https://pdbe.org/4eob PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eob RCSB], [https://www.ebi.ac.uk/pdbsum/4eob PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eob ProSAT]</span></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.611Å</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eob FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eob OCA], [https://pdbe.org/4eob PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eob RCSB], [https://www.ebi.ac.uk/pdbsum/4eob PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eob ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[https://www.uniprot.org/uniprot/TSE1_PSEAE TSE1_PSEAE]] Toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. Degrades peptidoglycan via amidase activity thereby helping itself to compete with other bacteria (PubMed:21776080, PubMed:22931054, PubMed:22813741, PubMed:22700987). To protect itself, the bacterium synthesizes immunity protein Tsi1 that specifically interacts with and inactivates cognate toxin (PubMed:21776080, PubMed:22931054, PubMed:22700987).<ref>PMID:21776080</ref> <ref>PMID:22700987</ref> <ref>PMID:22813741</ref> <ref>PMID:22931054</ref>		[https://www.uniprot.org/uniprot/TSE1_PSEAE TSE1_PSEAE] Toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. Degrades peptidoglycan via amidase activity thereby helping itself to compete with other bacteria (PubMed:21776080, PubMed:22931054, PubMed:22813741, PubMed:22700987). To protect itself, the bacterium synthesizes immunity protein Tsi1 that specifically interacts with and inactivates cognate toxin (PubMed:21776080, PubMed:22931054, PubMed:22700987).<ref>PMID:21776080</ref> <ref>PMID:22700987</ref> <ref>PMID:22813741</ref> <ref>PMID:22931054</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 07:20, 28 September 2022

2022-09-28T07:20:33Z

← Older revision		Revision as of 07:20, 28 September 2022
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	==Structure of the type VI peptidoglycan amidase effector Tse1 from Pseudomonas aeruginosa==		==Structure of the type VI peptidoglycan amidase effector Tse1 from Pseudomonas aeruginosa==
	<StructureSection load='4eob' size='340' side='right' caption='[[4eob]], [[Resolution\|resolution]] 2.61Å' scene=''>		<StructureSection load='4eob' size='340' side='right'caption='[[4eob]], [[Resolution\|resolution]] 2.61Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4eob]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Pseae Pseae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EOB OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4EOB FirstGlance]. <br>		<table><tr><td colspan='2'>[[4eob]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EOB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EOB FirstGlance]. <br>
	</td></tr>~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>~~		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eob FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eob OCA], [https://pdbe.org/4eob PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eob RCSB], [https://www.ebi.ac.uk/pdbsum/4eob PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eob ProSAT]</span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4eob FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eob OCA], [~~http~~://pdbe.org/4eob PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4eob RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4eob PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4eob ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[[https://www.uniprot.org/uniprot/TSE1_PSEAE TSE1_PSEAE]] Toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. Degrades peptidoglycan via amidase activity thereby helping itself to compete with other bacteria (PubMed:21776080, PubMed:22931054, PubMed:22813741, PubMed:22700987). To protect itself, the bacterium synthesizes immunity protein Tsi1 that specifically interacts with and inactivates cognate toxin (PubMed:21776080, PubMed:22931054, PubMed:22700987).<ref>PMID:21776080</ref> <ref>PMID:22700987</ref> <ref>PMID:22813741</ref> <ref>PMID:22931054</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Pseae~~]]		[[Category: Large Structures]]
	[[Category: ~~Chou, S~~]]		[[Category: Pseudomonas aeruginosa PAO1]]
	[[Category: ~~Mougous, J D~~]]		[[Category: Chou S]]
	[[Category: ~~Amidase]]~~		[[Category: Mougous JD]]
	~~[[Category: Bacteriolytic]]~~
	~~[[Category: Hydrolase]]~~
	~~[[Category: Pa1845]]~~
	~~[[Category: Peptidoglycan degrading]]~~
	~~[[Category: Protease]]~~
	~~[[Category: Tsi1~~]]

OCA at 22:52, 4 August 2016

2016-08-04T22:52:29Z

@@ Line 1: / Line 1: @@
-==About this Structure==
+==Structure of the type VI peptidoglycan amidase effector Tse1 from Pseudomonas aeruginosa==
-[[4eob]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EOB OCA].
+<StructureSection load='4eob' size='340' side='right' caption='[[4eob]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
-[[Category: Pseudomonas aeruginosa pao1]]
+== Structural highlights ==
-[[Category: Chou, S.]]
+<table><tr><td colspan='2'>[[4eob]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EOB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EOB FirstGlance]. <br>
-[[Category: Mougous, J D.]]
+</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
 [[Category: Amidase]]
 [[Category: Bacteriolytic]]

OCA at 07:52, 27 March 2013

2013-03-27T07:52:56Z

← Older revision		Revision as of 07:52, 27 March 2013
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	~~[[Image:4eob.png\|left\|200px]]~~

	{{STRUCTURE_4eob\| PDB=4eob \| SCENE= }}		{{STRUCTURE_4eob\| PDB=4eob \| SCENE= }}

	===Structure of the type VI peptidoglycan amidase effector Tse1 from Pseudomonas aeruginosa===		===Structure of the type VI peptidoglycan amidase effector Tse1 from Pseudomonas aeruginosa===
			{{ABSTRACT_PUBMED_22813741}}

	==About this Structure==		==About this Structure==
	[[4eob]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_aeruginosa~~ Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EOB OCA].		[[4eob]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EOB OCA].
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa pao1]]
	[[Category: Chou, S.]]		[[Category: Chou, S.]]
	[[Category: Mougous, J D.]]		[[Category: Mougous, J D.]]

OCA at 07:27, 11 July 2012

2012-07-11T07:27:41Z

← Older revision		Revision as of 07:27, 11 July 2012
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	[[Image:4eob.png\|left\|200px]]		[[Image:4eob.png\|left\|200px]]

	~~<!--~~
	~~The line below this paragraph, containing "STRUCTURE_4eob", creates the "Structure Box" on the page.~~
	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~
	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~
	~~or leave the SCENE parameter empty for the default display.~~
	~~-->~~
	{{STRUCTURE_4eob\| PDB=4eob \| SCENE= }}		{{STRUCTURE_4eob\| PDB=4eob \| SCENE= }}

OCA at 06:58, 6 June 2012

2012-06-06T06:58:14Z

← Older revision		Revision as of 06:58, 6 June 2012
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	[[Image:4eob.~~jpg~~\|left\|200px]]		[[Image:4eob.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_4eob\| PDB=4eob \| SCENE= }}		{{STRUCTURE_4eob\| PDB=4eob \| SCENE= }}

	===Structure of the type VI amidase effector Tse1 from Pseudomonas aeruginosa===		===Structure of the type VI peptidoglycan amidase effector Tse1 from Pseudomonas aeruginosa===

OCA at 06:06, 30 May 2012

2012-05-30T06:06:03Z

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
+[[Image:4eob.jpg|left|200px]]
-The entry 4eob is ON HOLD  until Paper Publication
+<!--
-Authors: Chou, S., Mougous, J.D.
+===Structure of the type VI amidase effector Tse1 from Pseudomonas aeruginosa===
-Description:

OCA at 08:48, 9 May 2012

2012-05-09T08:48:23Z

← Older revision		Revision as of 08:48, 9 May 2012
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	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 4eob is ON HOLD		The entry 4eob is ON HOLD until Paper Publication

	Authors: Chou, S., Mougous, J.D.		Authors: Chou, S., Mougous, J.D.

	Description: ~~Structure of the type VI amidase effector Tse1 from Pseudomonas aeruginosa~~		Description:

OCA: Protected "4eob" [edit=sysop:move=sysop]

2012-04-25T08:55:20Z

Protected "4eob" [edit=sysop:move=sysop]

← Older revision	Revision as of 08:55, 25 April 2012
(No difference)