4fqa - Revision history

OCA at 02:53, 21 November 2024

2024-11-21T02:53:52Z

← Older revision		Revision as of 02:53, 21 November 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4fqa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4FQA FirstGlance]. <br>		<table><tr><td colspan='2'>[[4fqa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4FQA FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4fqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fqa OCA], [https://pdbe.org/4fqa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4fqa RCSB], [https://www.ebi.ac.uk/pdbsum/4fqa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4fqa ProSAT]</span></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4fqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fqa OCA], [https://pdbe.org/4fqa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4fqa RCSB], [https://www.ebi.ac.uk/pdbsum/4fqa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4fqa ProSAT]</span></td></tr>
	</table>		</table>
	~~== Function ==~~
	[https://www.uniprot.org/uniprot/TSE1_PSEAE TSE1_PSEAE] Toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. Degrades peptidoglycan via amidase activity thereby helping itself to compete with other bacteria (PubMed:21776080, PubMed:22931054, PubMed:22813741, PubMed:22700987). To protect itself, the bacterium synthesizes immunity protein Tsi1 that specifically interacts with and inactivates cognate toxin (PubMed:21776080, PubMed:22931054, PubMed:22700987).<ref>PMID:21776080</ref> <ref>PMID:22700987</ref> <ref>PMID:22813741</ref> <ref>PMID:22931054</ref>
	~~== References ==~~
	~~<references/>~~
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 20:05, 19 October 2022

2022-10-19T20:05:23Z

← Older revision		Revision as of 20:05, 19 October 2022
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	==Crystal structure of toxic effector Tse1==		==Crystal structure of toxic effector Tse1==
	<StructureSection load='4fqa' size='340' side='right' caption='[[4fqa]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='4fqa' size='340' side='right'caption='[[4fqa]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4fqa]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Pseae Pseae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4FQA FirstGlance]. <br>		<table><tr><td colspan='2'>[[4fqa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4FQA FirstGlance]. <br>
	</td></tr>~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4fqb\|4fqb]]</td></tr>~~		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4fqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fqa OCA], [https://pdbe.org/4fqa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4fqa RCSB], [https://www.ebi.ac.uk/pdbsum/4fqa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4fqa ProSAT]</span></td></tr>
	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>~~
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4fqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fqa OCA], [~~http~~://pdbe.org/4fqa PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4fqa RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4fqa PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4fqa ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/TSE1_PSEAE TSE1_PSEAE] Toxin secreted by the H1 type VI (H1-T6SS) secretion system into the periplasm of recipient cells. Degrades peptidoglycan via amidase activity thereby helping itself to compete with other bacteria (PubMed:21776080, PubMed:22931054, PubMed:22813741, PubMed:22700987). To protect itself, the bacterium synthesizes immunity protein Tsi1 that specifically interacts with and inactivates cognate toxin (PubMed:21776080, PubMed:22931054, PubMed:22700987).<ref>PMID:21776080</ref> <ref>PMID:22700987</ref> <ref>PMID:22813741</ref> <ref>PMID:22931054</ref>
			== References ==
			<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Pseae~~]]		[[Category: Large Structures]]
	[[Category: ~~Li, L~~]]		[[Category: Pseudomonas aeruginosa PAO1]]
	[[Category: ~~Wang, T~~]]		[[Category: Li L]]
	[[Category: ~~Zhang, W~~]]		[[Category: Wang T]]
	[[Category: ~~Helix and strand]]~~		[[Category: Zhang W]]
	~~[[Category: Toxic effector]]~~
	~~[[Category: Toxin]]~~
	~~[[Category: Tsi1~~]]

OCA at 09:28, 5 August 2016

2016-08-05T09:28:39Z

← Older revision		Revision as of 09:28, 5 August 2016
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	==Crystal structure of toxic effector Tse1==		==Crystal structure of toxic effector Tse1==
	<StructureSection load='4fqa' size='340' side='right' caption='[[4fqa]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='4fqa' size='340' side='right' caption='[[4fqa]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4fqa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FQA FirstGlance]. <br>		<table><tr><td colspan='2'>[[4fqa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FQA FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4fqb\|4fqb]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4fqb\|4fqb]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 ~~Pseudomonas aeruginosa PAO1~~])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fqa OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4fqa RCSB], [http://www.ebi.ac.uk/pdbsum/4fqa PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fqa OCA], [http://pdbe.org/4fqa PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4fqa RCSB], [http://www.ebi.ac.uk/pdbsum/4fqa PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4fqa ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Pseudomonas aeruginosa pao1~~]]		[[Category: Pseae]]
	[[Category: Li, L]]		[[Category: Li, L]]
	[[Category: Wang, T]]		[[Category: Wang, T]]

OCA at 10:55, 21 December 2014

2014-12-21T10:55:45Z

← Older revision		Revision as of 10:55, 21 December 2014
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	~~{{STRUCTURE_4fqa\| PDB=4fqa \| SCENE= }}~~		==Crystal structure of toxic effector Tse1==
	===Crystal structure of toxic effector Tse1===		<StructureSection load='4fqa' size='340' side='right' caption='[[4fqa]], [[Resolution\|resolution]] 2.10Å' scene=''>
			== Structural highlights ==
	==~~About this Structure~~==		<table><tr><td colspan='2'>[[4fqa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FQA FirstGlance]. <br>
	[[4fqa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA].		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4fqb\|4fqb]]</td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PA1844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 Pseudomonas aeruginosa PAO1])</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fqa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fqa OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4fqa RCSB], [http://www.ebi.ac.uk/pdbsum/4fqa PDBsum]</span></td></tr>
			</table>
			__TOC__
			</StructureSection>
	[[Category: Pseudomonas aeruginosa pao1]]		[[Category: Pseudomonas aeruginosa pao1]]
	[[Category: Li, L.]]		[[Category: Li, L]]
	[[Category: Wang, T.]]		[[Category: Wang, T]]
	[[Category: Zhang, W.]]		[[Category: Zhang, W]]
	[[Category: Helix and strand]]		[[Category: Helix and strand]]
	[[Category: Toxic effector]]		[[Category: Toxic effector]]
	[[Category: Toxin]]		[[Category: Toxin]]
	[[Category: Tsi1]]		[[Category: Tsi1]]

OCA at 10:23, 30 June 2013

2013-06-30T10:23:59Z

← Older revision		Revision as of 10:23, 30 June 2013
Line 1:		Line 1:
	~~'''Unreleased~~ structure~~'''~~		{{STRUCTURE_4fqa\| PDB=4fqa \| SCENE= }}
			===Crystal structure of toxic effector Tse1===

	~~The entry~~ 4fqa is ~~ON HOLD until Jun 26 2014~~		==About this Structure==
			[[4fqa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FQA OCA].
	~~Authors~~: Li, L., Zhang, W.~~, Wang, T.~~		[[Category: Pseudomonas aeruginosa pao1]]
			[[Category: Li, L.]]
	~~Description~~: ~~Crystal structure of toxic~~ effector ~~Tse1~~		[[Category: Wang, T.]]
			[[Category: Zhang, W.]]
			[[Category: Helix and strand]]
			[[Category: Toxic effector]]
			[[Category: Toxin]]
			[[Category: Tsi1]]

OCA at 11:00, 19 June 2013

2013-06-19T11:00:38Z

← Older revision		Revision as of 11:00, 19 June 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 4fqa is ON HOLD until ~~Paper Publication~~		The entry 4fqa is ON HOLD until Jun 26 2014

	Authors: Li, L., Zhang, W., Wang, T.		Authors: Li, L., Zhang, W., Wang, T.

	Description: Crystal structure of toxic effector Tse1		Description: Crystal structure of toxic effector Tse1

OCA at 04:47, 12 September 2012

2012-09-12T04:47:57Z

← Older revision		Revision as of 04:47, 12 September 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 4fqa is ON HOLD		The entry 4fqa is ON HOLD until Paper Publication

	Authors: Li, L., Zhang, W., Wang, T.		Authors: Li, L., Zhang, W., Wang, T.

	Description: Crystal structure of toxic effector Tse1		Description: Crystal structure of toxic effector Tse1

OCA at 06:46, 25 July 2012

2012-07-25T06:46:32Z

← Older revision		Revision as of 06:46, 25 July 2012
Line 3:		Line 3:
	The entry 4fqa is ON HOLD		The entry 4fqa is ON HOLD

	Authors: Li, ~~Lianbo~~, Zhang, ~~Weili~~, Wang, ~~Tao~~		Authors: Li, L., Zhang, W., Wang, T.

	Description: Crystal structure of toxic effector Tse1		Description: Crystal structure of toxic effector Tse1

OCA: Protected "4fqa" [edit=sysop:move=sysop]

2012-07-04T07:19:23Z

Protected "4fqa" [edit=sysop:move=sysop]

← Older revision	Revision as of 07:19, 4 July 2012
(No difference)

OCA: New page: '''Unreleased structure''' The entry 4fqa is ON HOLD Authors: Li, Lianbo, Zhang, Weili, Wang, Tao Description: Crystal structure of toxic effector Tse1

2012-07-04T07:19:22Z

New page: '''Unreleased structure''' The entry 4fqa is ON HOLD Authors: Li, Lianbo, Zhang, Weili, Wang, Tao Description: Crystal structure of toxic effector Tse1

New page

'''Unreleased structure'''

The entry 4fqa is ON HOLD

Authors: Li, Lianbo, Zhang, Weili, Wang, Tao

Description: Crystal structure of toxic effector Tse1