4map - Revision history

OCA at 16:35, 20 September 2023

2023-09-20T16:35:08Z

← Older revision		Revision as of 16:35, 20 September 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4map]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MAP FirstGlance]. <br>		<table><tr><td colspan='2'>[[4map]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MAP FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
			<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4map FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4map OCA], [https://pdbe.org/4map PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4map RCSB], [https://www.ebi.ac.uk/pdbsum/4map PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4map ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4map FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4map OCA], [https://pdbe.org/4map PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4map RCSB], [https://www.ebi.ac.uk/pdbsum/4map PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4map ProSAT]</span></td></tr>
	</table>		</table>

OCA at 11:06, 21 December 2022

2022-12-21T11:06:44Z

← Older revision		Revision as of 11:06, 21 December 2022
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	<StructureSection load='4map' size='340' side='right'caption='[[4map]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='4map' size='340' side='right'caption='[[4map]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4map]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Arahy Arahy~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4MAP FirstGlance]. <br>		<table><tr><td colspan='2'>[[4map]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MAP FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>~~</td></tr>~~		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4m9b\|4m9b]], [[4m9w\|4m9w]], [[4ma6\|4ma6]]~~</td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4map FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4map OCA], [https://pdbe.org/4map PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4map RCSB], [https://www.ebi.ac.uk/pdbsum/4map PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4map ProSAT]</span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4map FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4map OCA], [~~http~~://pdbe.org/4map PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4map RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4map PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4map ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/Q6VT83_ARAHY Q6VT83_ARAHY]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Arahy~~]]		[[Category: Arachis hypogaea]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Chruszcz, M]]		[[Category: Chruszcz M]]
	[[Category: Hurlburt~~, B K~~]]		[[Category: Hurlburt BK]]
	[[Category: Majorek~~, K A~~]]		[[Category: Majorek KA]]
	[[Category: Maleki~~, S J~~]]		[[Category: Maleki SJ]]
	[[Category: McBride~~, J K~~]]		[[Category: McBride JK]]
	[[Category: Offermann~~, L R]]~~		[[Category: Offermann LR]]
	~~[[Category: Bet v 1 like]]~~
	~~[[Category: Plant protein]]~~
	~~[[Category: Small molecule carrier~~]]

OCA at 09:04, 3 April 2019

2019-04-03T09:04:34Z

← Older revision		Revision as of 09:04, 3 April 2019
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	==Crystal structure of Ara h 8 purified with heating==		==Crystal structure of Ara h 8 purified with heating==
	<StructureSection load='4map' size='340' side='right' caption='[[4map]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='4map' size='340' side='right'caption='[[4map]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4map]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arahy Arahy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MAP FirstGlance]. <br>		<table><tr><td colspan='2'>[[4map]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arahy Arahy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MAP FirstGlance]. <br>
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	</StructureSection>		</StructureSection>
	[[Category: Arahy]]		[[Category: Arahy]]
			[[Category: Large Structures]]
	[[Category: Chruszcz, M]]		[[Category: Chruszcz, M]]
	[[Category: Hurlburt, B K]]		[[Category: Hurlburt, B K]]

OCA at 15:23, 11 August 2016

2016-08-11T15:23:30Z

← Older revision		Revision as of 15:23, 11 August 2016
Line 1:		Line 1:

	==Crystal structure of Ara h 8 purified with heating==		==Crystal structure of Ara h 8 purified with heating==
	<StructureSection load='4map' size='340' side='right' caption='[[4map]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='4map' size='340' side='right' caption='[[4map]], [[Resolution\|resolution]] 1.90Å' scene=''>
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	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4m9b\|4m9b]], [[4m9w\|4m9w]], [[4ma6\|4ma6]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4m9b\|4m9b]], [[4m9w\|4m9w]], [[4ma6\|4ma6]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4map FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4map OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4map RCSB], [http://www.ebi.ac.uk/pdbsum/4map PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4map FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4map OCA], [http://pdbe.org/4map PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4map RCSB], [http://www.ebi.ac.uk/pdbsum/4map PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4map ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
			<div class="pdbe-citations 4map" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 09:28, 5 January 2015

2015-01-05T09:28:14Z

← Older revision		Revision as of 09:28, 5 January 2015
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	~~{{STRUCTURE_4map\| PDB=4map \| SCENE= }}~~		==Crystal structure of Ara h 8 purified with heating==
	===Crystal structure of Ara h 8 purified with heating===		<StructureSection load='4map' size='340' side='right' caption='[[4map]], [[Resolution\|resolution]] 1.90Å' scene=''>
	~~{{ABSTRACT_PUBMED_24253038}}~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[4map]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arahy Arahy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4MAP FirstGlance]. <br>
			</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
			<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4m9b\|4m9b]], [[4m9w\|4m9w]], [[4ma6\|4ma6]]</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4map FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4map OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4map RCSB], [http://www.ebi.ac.uk/pdbsum/4map PDBsum]</span></td></tr>
			</table>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			The incidence of peanut allergy continues to rise in the United States and Europe. Whereas exposure to the major allergens Ara h 1, 2, 3, and 6 can cause fatal anaphylaxis, exposure to the minor allergens usually does not. Ara h 8 is a minor allergen. Importantly, it is the minor food allergens that are thought to be responsible for oral allergy syndrome (OAS), in which sensitization to airborne allergens causes a Type 2 allergic reaction to ingested foods. Furthermore, it is believed that similar protein structure rather than a similar linear sequence is the cause of OAS. Bet v 1 from birch pollen is a common sensitizing agent, and OAS results when patients consume certain fruits, vegetables, tree nuts, and peanuts. Here, we report the three-dimensional structure of Ara h 8, a Bet v 1 homolog. The overall fold is very similar to that of Bet v 1, Api g 1 (celery), Gly m 4 (soy), and Pru av 1 (cherry). Ara h 8 binds the isoflavones quercetin and apigenin as well as resveratrol avidly.

	~~==About this~~ Structure==		Structure and Function of the Peanut Panallergen Ara h 8.,Hurlburt BK, Offermann LR, McBride JK, Majorek KA, Maleki SJ, Chruszcz M J Biol Chem. 2013 Dec 27;288(52):36890-901. doi: 10.1074/jbc.M113.517797. Epub, 2013 Nov 19. PMID:24253038<ref>PMID:24253038</ref>
	~~[[4map]] is a 2 chain structure with sequence from [http~~:~~//en~~.~~wikipedia~~.~~org/wiki~~/~~Arahy Arahy]~~. ~~Full crystallographic information is available from [http://oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=4MAP OCA].~~

	==~~Reference~~==		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	~~<ref group="xtra">PMID:024253038</ref>~~<references ~~group="xtra"~~/><~~references~~/>		</div>
			== References ==
			<references/>
			__TOC__
			</StructureSection>
	[[Category: Arahy]]		[[Category: Arahy]]
	[[Category: Chruszcz, M.]]		[[Category: Chruszcz, M]]
	[[Category: Hurlburt, B K.]]		[[Category: Hurlburt, B K]]
	[[Category: Majorek, K A.]]		[[Category: Majorek, K A]]
	[[Category: Maleki, S J.]]		[[Category: Maleki, S J]]
	[[Category: McBride, J K.]]		[[Category: McBride, J K]]
	[[Category: Offermann, L R.]]		[[Category: Offermann, L R]]
	[[Category: Bet v 1 like]]		[[Category: Bet v 1 like]]
	[[Category: Plant protein]]		[[Category: Plant protein]]
	[[Category: Small molecule carrier]]		[[Category: Small molecule carrier]]

OCA at 07:12, 15 January 2014

2014-01-15T07:12:10Z

← Older revision		Revision as of 07:12, 15 January 2014
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	{{STRUCTURE_4map\| PDB=4map \| SCENE= }}		{{STRUCTURE_4map\| PDB=4map \| SCENE= }}
	===Crystal structure of Ara h 8 purified with heating===		===Crystal structure of Ara h 8 purified with heating===
			{{ABSTRACT_PUBMED_24253038}}

	==About this Structure==		==About this Structure==
	[[4map]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA].		[[4map]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arahy Arahy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA].

			==Reference==
			<ref group="xtra">PMID:024253038</ref><references group="xtra"/><references/>
			[[Category: Arahy]]
	[[Category: Chruszcz, M.]]		[[Category: Chruszcz, M.]]
	[[Category: Hurlburt, B K.]]		[[Category: Hurlburt, B K.]]

OCA at 10:35, 27 November 2013

2013-11-27T10:35:01Z

← Older revision		Revision as of 10:35, 27 November 2013
Line 1:		Line 1:
	~~'''Unreleased~~ structure~~'''~~		{{STRUCTURE_4map\| PDB=4map \| SCENE= }}
			===Crystal structure of Ara h 8 purified with heating===

	~~The entry~~ 4map is ~~ON HOLD until Paper Publication~~		==About this Structure==
			[[4map]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MAP OCA].
	~~Authors~~: ~~Offermann~~, L.~~R.,~~ Hurlburt, B.K., Majorek, K.A., McBride, J.K., ~~Maleki, S.J., Chruszcz, M~~.		[[Category: Chruszcz, M.]]
			[[Category: Hurlburt, B K.]]
	~~Description~~: ~~Crystal structure of Ara h 8 purified with heating~~		[[Category: Majorek, K A.]]
			[[Category: Maleki, S J.]]
			[[Category: McBride, J K.]]
			[[Category: Offermann, L R.]]
			[[Category: Bet v 1 like]]
			[[Category: Plant protein]]
			[[Category: Small molecule carrier]]

OCA at 03:36, 20 September 2013

2013-09-20T03:36:39Z

← Older revision		Revision as of 03:36, 20 September 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 4map is ON HOLD		The entry 4map is ON HOLD until Paper Publication

	Authors: Offermann, L.R., Hurlburt, B.K., Majorek, K.A., McBride, J.K., Maleki, S.J., Chruszcz, M.		Authors: Offermann, L.R., Hurlburt, B.K., Majorek, K.A., McBride, J.K., Maleki, S.J., Chruszcz, M.

	Description: Crystal structure of Ara h 8 purified with heating		Description: Crystal structure of Ara h 8 purified with heating

OCA: Protected "4map" [edit=sysop:move=sysop]

2013-08-28T06:55:21Z

Protected "4map" [edit=sysop:move=sysop]

← Older revision	Revision as of 06:55, 28 August 2013
(No difference)

OCA: New page: '''Unreleased structure''' The entry 4map is ON HOLD Authors: Offermann, L.R., Hurlburt, B.K., Majorek, K.A., McBride, J.K., Maleki, S.J., Chruszcz, M. Description: Crystal structure o...

2013-08-28T06:55:20Z

New page: '''Unreleased structure''' The entry 4map is ON HOLD Authors: Offermann, L.R., Hurlburt, B.K., Majorek, K.A., McBride, J.K., Maleki, S.J., Chruszcz, M. Description: Crystal structure o...

New page

'''Unreleased structure'''

The entry 4map is ON HOLD

Authors: Offermann, L.R., Hurlburt, B.K., Majorek, K.A., McBride, J.K., Maleki, S.J., Chruszcz, M.

Description: Crystal structure of Ara h 8 purified with heating