4utm - Revision history

OCA at 11:23, 9 May 2024

2024-05-09T11:23:33Z

← Older revision		Revision as of 11:23, 9 May 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UTM FirstGlance]. <br>		<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UTM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8CM:8-HYDROXYCOUMARIN'>8CM</scene>, <scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.09Å</td></tr>
			<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8CM:8-HYDROXYCOUMARIN'>8CM</scene>, <scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4utm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utm OCA], [https://pdbe.org/4utm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4utm RCSB], [https://www.ebi.ac.uk/pdbsum/4utm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4utm ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4utm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utm OCA], [https://pdbe.org/4utm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4utm RCSB], [https://www.ebi.ac.uk/pdbsum/4utm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4utm ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:37, 29 March 2023

2023-03-29T07:37:50Z

← Older revision		Revision as of 07:37, 29 March 2023
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	<StructureSection load='4utm' size='340' side='right'caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>		<StructureSection load='4utm' size='340' side='right'caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4UTM FirstGlance]. <br>		<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UTM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8CM:8-HYDROXYCOUMARIN'>8CM</scene>, <scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene~~></td></tr>~~		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8CM:8-HYDROXYCOUMARIN'>8CM</scene>, <scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4uth\|4uth]], [[4uti\|4uti]], [[4utj\|4utj]], [[4utk\|4utk]], [[4utl\|4utl]]</td></tr>~~		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4utm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utm OCA], [https://pdbe.org/4utm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4utm RCSB], [https://www.ebi.ac.uk/pdbsum/4utm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4utm ProSAT]</span></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NADPH_dehydrogenase NADPH dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.6.99.1 1.6.99.1] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4utm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utm OCA], [~~http~~://pdbe.org/4utm PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4utm RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4utm PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4utm ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/Q3ZDM6_PSEPU Q3ZDM6_PSEPU]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	~~[[Category: Bacillus fluorescens putidus flugge 1886]]~~
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: ~~NADPH dehydrogenase~~]]		[[Category: Pseudomonas putida]]
	[[Category: Dobbek, H]]		[[Category: Dobbek H]]
	[[Category: Werther, T]]		[[Category: Werther T]]
	~~[[Category: Oxidoreductase~~]]

OCA at 10:48, 26 February 2020

2020-02-26T10:48:07Z

← Older revision		Revision as of 10:48, 26 February 2020
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	==XenA - Reduced - Y183F variant in complex with 8-hydroxycoumarin==		==XenA - Reduced - Y183F variant in complex with 8-hydroxycoumarin==
	<StructureSection load='4utm' size='340' side='right' caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>		<StructureSection load='4utm' size='340' side='right'caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UTM FirstGlance]. <br>		<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UTM FirstGlance]. <br>
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	</StructureSection>		</StructureSection>
	[[Category: Bacillus fluorescens putidus flugge 1886]]		[[Category: Bacillus fluorescens putidus flugge 1886]]
			[[Category: Large Structures]]
	[[Category: NADPH dehydrogenase]]		[[Category: NADPH dehydrogenase]]
	[[Category: Dobbek, H]]		[[Category: Dobbek, H]]
	[[Category: Werther, T]]		[[Category: Werther, T]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 01:11, 16 November 2017

2017-11-16T01:11:22Z

← Older revision		Revision as of 01:11, 16 November 2017
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	<StructureSection load='4utm' size='340' side='right' caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>		<StructureSection load='4utm' size='340' side='right' caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UTM FirstGlance]. <br>		<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UTM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8CM:8-HYDROXYCOUMARIN'>8CM</scene>, <scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8CM:8-HYDROXYCOUMARIN'>8CM</scene>, <scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4uth\|4uth]], [[4uti\|4uti]], [[4utj\|4utj]], [[4utk\|4utk]], [[4utl\|4utl]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4uth\|4uth]], [[4uti\|4uti]], [[4utj\|4utj]], [[4utk\|4utk]], [[4utl\|4utl]]</td></tr>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Bacillus fluorescens putidus flugge 1886]]
	[[Category: NADPH dehydrogenase]]		[[Category: NADPH dehydrogenase]]
	[[Category: Dobbek, H]]		[[Category: Dobbek, H]]
	[[Category: Werther, T]]		[[Category: Werther, T]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 13:22, 10 May 2017

2017-05-10T13:22:43Z

← Older revision		Revision as of 13:22, 10 May 2017
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	==XenA - Reduced - Y183F variant in complex with 8-hydroxycoumarin==		==XenA - Reduced - Y183F variant in complex with 8-hydroxycoumarin==
	<StructureSection load='4utm' size='340' side='right' caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>		<StructureSection load='4utm' size='340' side='right' caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>
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	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4uth\|4uth]], [[4uti\|4uti]], [[4utj\|4utj]], [[4utk\|4utk]], [[4utl\|4utl]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4uth\|4uth]], [[4uti\|4uti]], [[4utj\|4utj]], [[4utk\|4utk]], [[4utl\|4utl]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NADPH_dehydrogenase NADPH dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.6.99.1 1.6.99.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NADPH_dehydrogenase NADPH dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.6.99.1 1.6.99.1] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4utm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4utm RCSB], [http://www.ebi.ac.uk/pdbsum/4utm PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4utm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utm OCA], [http://pdbe.org/4utm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4utm RCSB], [http://www.ebi.ac.uk/pdbsum/4utm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4utm ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 20:11, 5 August 2015

2015-08-05T20:11:41Z

← Older revision		Revision as of 20:11, 5 August 2015
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	'''~~Unreleased structure~~'''		==XenA - Reduced - Y183F variant in complex with 8-hydroxycoumarin==
			<StructureSection load='4utm' size='340' side='right' caption='[[4utm]], [[Resolution\|resolution]] 1.09Å' scene=''>
	~~The entry~~ 4utm is ~~ON HOLD until Paper Publication~~		== Structural highlights ==
			<table><tr><td colspan='2'>[[4utm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UTM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UTM FirstGlance]. <br>
	~~Authors~~: ~~Werther~~, T., ~~Dobbek, H~~.		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8CM:8-HYDROXYCOUMARIN'>8CM</scene>, <scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
			<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4uth\|4uth]], [[4uti\|4uti]], [[4utj\|4utj]], [[4utk\|4utk]], [[4utl\|4utl]]</td></tr>
	~~Description~~: ~~XenA~~ -~~Reduced~~ -~~Y183F variant in complex with 8-hydroxycoumarin~~		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NADPH_dehydrogenase NADPH dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.6.99.1 1.6.99.1] </span></td></tr>
	[[Category: ~~Unreleased Structures~~]]		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4utm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4utm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4utm RCSB], [http://www.ebi.ac.uk/pdbsum/4utm PDBsum]</span></td></tr>
			</table>
			__TOC__
			</StructureSection>
			[[Category: NADPH dehydrogenase]]
	[[Category: Dobbek, H]]		[[Category: Dobbek, H]]
	[[Category: Werther, T]]		[[Category: Werther, T]]
			[[Category: Oxidoreductase]]

OCA at 18:41, 24 December 2014

2014-12-24T18:41:13Z

← Older revision		Revision as of 18:41, 24 December 2014
Line 6:		Line 6:

	Description: XenA -Reduced -Y183F variant in complex with 8-hydroxycoumarin		Description: XenA -Reduced -Y183F variant in complex with 8-hydroxycoumarin
			[[Category: Unreleased Structures]]
			[[Category: Dobbek, H]]
			[[Category: Werther, T]]

OCA at 15:11, 20 August 2014

2014-08-20T15:11:53Z

← Older revision		Revision as of 15:11, 20 August 2014
Line 5:		Line 5:
	Authors: Werther, T., Dobbek, H.		Authors: Werther, T., Dobbek, H.

	Description: XenA -~~oxidized~~ -Y183F variant in complex with 8-hydroxycoumarin		Description: XenA -Reduced -Y183F variant in complex with 8-hydroxycoumarin

OCA: Protected "4utm" [edit=sysop:move=sysop]

2014-07-30T07:20:28Z

Protected "4utm" [edit=sysop:move=sysop]

← Older revision	Revision as of 07:20, 30 July 2014
(No difference)

OCA: New page: '''Unreleased structure''' The entry 4utm is ON HOLD until Paper Publication Authors: Werther, T., Dobbek, H. Description: XenA -oxidized -Y183F variant in complex with 8-hydroxycoumar...

2014-07-30T07:20:27Z

New page: '''Unreleased structure''' The entry 4utm is ON HOLD until Paper Publication Authors: Werther, T., Dobbek, H. Description: XenA -oxidized -Y183F variant in complex with 8-hydroxycoumar...

New page

'''Unreleased structure'''

The entry 4utm is ON HOLD until Paper Publication

Authors: Werther, T., Dobbek, H.

Description: XenA -oxidized -Y183F variant in complex with 8-hydroxycoumarin