5err - Revision history

OCA at 08:19, 12 July 2023

2023-07-12T08:19:23Z

← Older revision		Revision as of 08:19, 12 July 2023
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	<StructureSection load='5err' size='340' side='right'caption='[[5err]], [[Resolution\|resolution]] 1.65Å' scene=''>		<StructureSection load='5err' size='340' side='right'caption='[[5err]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5err]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Buffalo_rat Buffalo rat~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ERR OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5ERR FirstGlance]. <br>		<table><tr><td colspan='2'>[[5err]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ERR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ERR FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>~~</td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.65Å</td></tr>
	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Gphn, Gph ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])~~</td></tr>		<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5err FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5err OCA], [~~http~~://pdbe.org/5err PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5err RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5err PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5err ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5err FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5err OCA], [https://pdbe.org/5err PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5err RCSB], [https://www.ebi.ac.uk/pdbsum/5err PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5err ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[~~[http~~://www.uniprot.org/uniprot/GEPH_RAT GEPH_RAT]] Microtubule-associated protein involved in membrane protein-cytoskeleton interactions. It is thought to anchor the inhibitory glycine receptor (GLYR) to subsynaptic microtubules (By similarity). Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.<ref>PMID:8264797</ref> <ref>PMID:9990024</ref>		[https://www.uniprot.org/uniprot/GEPH_RAT GEPH_RAT] Microtubule-associated protein involved in membrane protein-cytoskeleton interactions. It is thought to anchor the inhibitory glycine receptor (GLYR) to subsynaptic microtubules (By similarity). Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.<ref>PMID:8264797</ref> <ref>PMID:9990024</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	~~[[Category: Buffalo rat]]~~
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: ~~Kasaragod, V B~~]]		[[Category: Rattus norvegicus]]
	[[Category: ~~Schindelin, H~~]]		[[Category: Kasaragod VB]]
	[[Category: ~~Moco]]~~		[[Category: Schindelin H]]
	~~[[Category: Molybdenum and tungsten cofactor]]~~
	~~[[Category: Terminal step]]~~
	~~[[Category: Transferase]]~~
	~~[[Category: Wco~~]]

OCA at 07:10, 22 April 2020

2020-04-22T07:10:52Z

← Older revision		Revision as of 07:10, 22 April 2020
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	==GephE in complex with Mg(2+) - ADP==		==GephE in complex with Mg(2+) - ADP==
	<StructureSection load='5err' size='340' side='right' caption='[[5err]], [[Resolution\|resolution]] 1.65Å' scene=''>		<StructureSection load='5err' size='340' side='right'caption='[[5err]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5err]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ERR OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5ERR FirstGlance]. <br>		<table><tr><td colspan='2'>[[5err]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ERR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5ERR FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5err FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5err OCA], [http://pdbe.org/5err PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5err RCSB], [http://www.ebi.ac.uk/pdbsum/5err PDBsum]</span></td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Gphn, Gph ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5err FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5err OCA], [http://pdbe.org/5err PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5err RCSB], [http://www.ebi.ac.uk/pdbsum/5err PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5err ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	</div>		</div>
	<div class="pdbe-citations 5err" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 5err" style="background-color:#fffaf0;"></div>

			==See Also==
			*[[Gephyrin\|Gephyrin]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Buffalo rat]]
			[[Category: Large Structures]]
	[[Category: Kasaragod, V B]]		[[Category: Kasaragod, V B]]
	[[Category: Schindelin, H]]		[[Category: Schindelin, H]]

OCA at 05:08, 11 May 2016

2016-05-11T05:08:13Z

@@ Line 1: / Line 1: @@
-The entry 5err is ON HOLD  until Paper Publication
+==GephE in complex with Mg(2+) - ADP==
-Authors: Kasaragod, V.B., Schindelin, H.
+Structural Framework for Metal Incorporation during Molybdenum Cofactor Biosynthesis.,Kasaragod VB, Schindelin H Structure. 2016 May 3;24(5):782-8. doi: 10.1016/j.str.2016.02.023. Epub 2016 Apr , 21. PMID:27112598<ref>PMID:27112598</ref>
-Description:
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-[[Category: Unreleased Structures]]
+</div>
 [[Category: Schindelin, H]]
-[[Category: Kasaragod, V.B]]
+[[Category: Moco]]

OCA at 23:21, 20 February 2016

2016-02-20T23:21:02Z

← Older revision		Revision as of 23:21, 20 February 2016
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	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 5err is ON HOLD		The entry 5err is ON HOLD until Paper Publication

	Authors: Kasaragod, V.B., Schindelin, H.		Authors: Kasaragod, V.B., Schindelin, H.

OCA: Protected "5err" [edit=sysop:move=sysop]

2015-12-01T03:17:08Z

Protected "5err" [edit=sysop:move=sysop]

← Older revision	Revision as of 03:17, 1 December 2015
(No difference)

OCA: New page: '''Unreleased structure''' The entry 5err is ON HOLD Authors: Kasaragod, V.B., Schindelin, H. Description: Category: Unreleased Structures Category: Schindelin, H [[Category: ...

2015-12-01T03:17:06Z

New page: '''Unreleased structure''' The entry 5err is ON HOLD Authors: Kasaragod, V.B., Schindelin, H. Description: Category: Unreleased Structures Category: Schindelin, H [[Category: ...

New page

'''Unreleased structure'''

The entry 5err is ON HOLD

Authors: Kasaragod, V.B., Schindelin, H.

Description:
[[Category: Unreleased Structures]]
[[Category: Schindelin, H]]
[[Category: Kasaragod, V.B]]