6rtf - Revision history

OCA at 10:13, 22 May 2024

2024-05-22T10:13:04Z

← Older revision		Revision as of 10:13, 22 May 2024
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	<SX load='6rtf' size='340' side='right' viewer='molstar' caption='[[6rtf]], [[Resolution\|resolution]] 7.77Å' scene=''>		<SX load='6rtf' size='340' side='right' viewer='molstar' caption='[[6rtf]], [[Resolution\|resolution]] 7.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Lk3_transgenic_mice Lk3 transgenic mice~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=6RTF FirstGlance]. <br>		<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RTF FirstGlance]. <br>
	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~>[[6rtc\|6rtc]]</td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 7.77Å</td></tr>
	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">Slc26a9, mCG_51751 ([http://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5~~&~~id=10090 LK3 transgenic mice])~~</td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtf OCA], [https://pdbe.org/6rtf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rtf RCSB], [https://www.ebi.ac.uk/pdbsum/6rtf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtf ProSAT]</span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=6rtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtf OCA], [~~http~~://pdbe.org/6rtf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=6rtf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/6rtf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[~~[http~~://www.uniprot.org/uniprot/~~A0A0R4J0F7_MOUSE A0A0R4J0F7_MOUSE]~~] DIDS- and thiosulfate- sensitive anion exchanger mediating chloride, sulfate and oxalate transport.~~[RuleBase~~:~~RU362052]~~		[https://www.uniprot.org/uniprot/S26A9_MOUSE S26A9_MOUSE] DIDS- and thiosulfate- sensitive anion exchanger mediating chloride, sulfate and oxalate transport (PubMed:15800055, PubMed:17120765). Mediates chloride/bicarbonate exchange or chloride-independent bicarbonate extrusion thus assuring bicarbonate secretion (PubMed:15800055, PubMed:17120765). May prefer chloride anions and mediate uncoupled chloride anion transport in an alternate-access mechanism where a saturable binding site is alternately exposed to either one or the other side of the membrane (PubMed:31339488).<ref>PMID:15800055</ref> <ref>PMID:17120765</ref> <ref>PMID:31339488</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</SX>		</SX>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: ~~Lk3 transgenic mice~~]]		[[Category: Mus musculus]]
	[[Category: Dutzler, R]]		[[Category: Dutzler R]]
	[[Category: Sawicka, M]]		[[Category: Sawicka M]]
	[[Category: Walter~~, J D]]~~		[[Category: Walter JD]]
	~~[[Category: Anion transporter]]~~
	~~[[Category: Cryo-em]]~~
	~~[[Category: Membrane protein]]~~
	~~[[Category: Membrane protein structure]]~~
	~~[[Category: Single particle]]~~
	~~[[Category: Slc26 family]]~~
	~~[[Category: Transport mechanism~~]]

OCA at 05:50, 11 April 2020

2020-04-11T05:50:21Z

← Older revision		Revision as of 05:50, 11 April 2020
Line 3:		Line 3:
	<SX load='6rtf' size='340' side='right' viewer='molstar' caption='[[6rtf]], [[Resolution\|resolution]] 7.77Å' scene=''>		<SX load='6rtf' size='340' side='right' viewer='molstar' caption='[[6rtf]], [[Resolution\|resolution]] 7.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6RTF FirstGlance]. <br>		<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6RTF FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[6rtc\|6rtc]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[6rtc\|6rtc]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Slc26a9, mCG_51751 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Slc26a9, mCG_51751 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=6rtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtf OCA], [http://pdbe.org/6rtf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rtf RCSB], [http://www.ebi.ac.uk/pdbsum/6rtf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6rtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtf OCA], [http://pdbe.org/6rtf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rtf RCSB], [http://www.ebi.ac.uk/pdbsum/6rtf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 00:24, 7 March 2020

2020-03-07T00:24:25Z

← Older revision		Revision as of 00:24, 7 March 2020
Line 1:		Line 1:

	==Structure of murine Solute Carrier 26 family member A9 (Slc26a9) anion transporter in an intermediate state==		==Structure of murine Solute Carrier 26 family member A9 (Slc26a9) anion transporter in an intermediate state==
	<~~StructureSection~~ load='6rtf' size='340' side='right'caption='[[6rtf]], [[Resolution\|resolution]] 7.77Å' scene=''>		<SX load='6rtf' size='340' side='right' viewer='molstar' caption='[[6rtf]], [[Resolution\|resolution]] 7.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RTF FirstGlance]. <br>		<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RTF FirstGlance]. <br>
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	<references/>		<references/>
	__TOC__		__TOC__
	</~~StructureSection~~>		</SX>
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Lk3 transgenic mice]]		[[Category: Lk3 transgenic mice]]

OCA at 06:28, 7 August 2019

2019-08-07T06:28:18Z

← Older revision		Revision as of 06:28, 7 August 2019
Line 3:		Line 3:
	<StructureSection load='6rtf' size='340' side='right'caption='[[6rtf]], [[Resolution\|resolution]] 7.77Å' scene=''>		<StructureSection load='6rtf' size='340' side='right'caption='[[6rtf]], [[Resolution\|resolution]] 7.77Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RTF FirstGlance]. <br>		<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RTF FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[6rtc\|6rtc]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[6rtc\|6rtc]]</td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Slc26a9, mCG_51751 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6rtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtf OCA], [http://pdbe.org/6rtf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rtf RCSB], [http://www.ebi.ac.uk/pdbsum/6rtf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6rtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtf OCA], [http://pdbe.org/6rtf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rtf RCSB], [http://www.ebi.ac.uk/pdbsum/6rtf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/A0A0R4J0F7_MOUSE A0A0R4J0F7_MOUSE]] DIDS- and thiosulfate- sensitive anion exchanger mediating chloride, sulfate and oxalate transport.[RuleBase:RU362052]		[[http://www.uniprot.org/uniprot/A0A0R4J0F7_MOUSE A0A0R4J0F7_MOUSE]] DIDS- and thiosulfate- sensitive anion exchanger mediating chloride, sulfate and oxalate transport.[RuleBase:RU362052]
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			The epithelial anion transporter SLC26A9 contributes to airway surface hydration and gastric acid production. Colocalizing with CFTR, SLC26A9 has been proposed as a target for the treatment of cystic fibrosis. To provide molecular details of its transport mechanism, we present cryo-EM structures and a functional characterization of murine Slc26a9. These structures define the general architecture of eukaryotic SLC26 family members and reveal an unusual mode of oligomerization which relies predominantly on the cytosolic STAS domain. Our data illustrates conformational transitions of Slc26a9, supporting a rapid alternate-access mechanism which mediates uncoupled chloride transport with negligible bicarbonate or sulfate permeability. The characterization of structure-guided mutants illuminates the properties of the ion transport path, including a selective anion binding site located in the center of a mobile module within the transmembrane domain. This study thus provides a structural foundation for the understanding of the entire SLC26 family and potentially facilitates their therapeutic exploitation.

			Cryo-EM structures and functional characterization of murine Slc26a9 reveal mechanism of uncoupled chloride transport.,Walter JD, Sawicka M, Dutzler R Elife. 2019 Jul 24;8. pii: 46986. doi: 10.7554/eLife.46986. PMID:31339488<ref>PMID:31339488</ref>

			From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
			<div class="pdbe-citations 6rtf" style="background-color:#fffaf0;"></div>
			== References ==
			<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
			[[Category: Lk3 transgenic mice]]
	[[Category: Dutzler, R]]		[[Category: Dutzler, R]]
	[[Category: Sawicka, M]]		[[Category: Sawicka, M]]

OCA at 06:29, 24 July 2019

2019-07-24T06:29:27Z

@@ Line 1: / Line 1: @@
-The entry 6rtf is ON HOLD
+==Structure of murine Solute Carrier 26 family member A9 (Slc26a9) anion transporter in an intermediate state==
+<StructureSection load='6rtf' size='340' side='right'caption='[[6rtf]], [[Resolution|resolution]] 7.77&Aring;' scene=''>
-Authors:
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6rtf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RTF FirstGlance]. <br>
-Description:
+</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6rtc|6rtc]]</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6rtf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtf OCA], [http://pdbe.org/6rtf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rtf RCSB], [http://www.ebi.ac.uk/pdbsum/6rtf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtf ProSAT]</span></td></tr>

OCA: Protected "6rtf" [edit=sysop:move=sysop]

2019-05-29T04:49:06Z

Protected "6rtf" [edit=sysop:move=sysop]

← Older revision	Revision as of 04:49, 29 May 2019
(No difference)

OCA: New page: '''Unreleased structure''' The entry 6rtf is ON HOLD Authors: Description: Category: Unreleased Structures

2019-05-29T04:49:04Z

New page: '''Unreleased structure''' The entry 6rtf is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 6rtf is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]