7bme - Revision history

OCA at 12:30, 1 February 2024

2024-02-01T12:30:58Z

← Older revision		Revision as of 12:30, 1 February 2024
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	<StructureSection load='7bme' size='340' side='right'caption='[[7bme]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='7bme' size='340' side='right'caption='[[7bme]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[7bme]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Geotn Geotn~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BME OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BME FirstGlance]. <br>		<table><tr><td colspan='2'>[[7bme]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_thermodenitrificans_NG80-2 Geobacillus thermodenitrificans NG80-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BME OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BME FirstGlance]. <br>
	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[7bm2\|7bm2]]</div></td></tr>~~		</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.6Å</td></tr>
	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">GTNG_1019 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax~~.~~cgi?mode=Info~~&~~srchmode=5&id=420246 GEOTN])~~</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bme OCA], [https://pdbe.org/7bme PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bme RCSB], [https://www.ebi.ac.uk/pdbsum/7bme PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bme ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bme OCA], [https://pdbe.org/7bme PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bme RCSB], [https://www.ebi.ac.uk/pdbsum/7bme PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bme ProSAT]</span></td></tr>
	</table>		</table>
			== Function ==
			[https://www.uniprot.org/uniprot/Y1019_GEOTN Y1019_GEOTN]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: ~~Geotn~~]]		[[Category: Geobacillus thermodenitrificans NG80-2]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Altegoer, F]]		[[Category: Altegoer F]]
	[[Category: Bange, G]]		[[Category: Bange G]]
	[[Category: Mrusek, D]]		[[Category: Mrusek D]]
	~~[[Category: Biofilm]]~~
	~~[[Category: Dna binding protein]]~~
	~~[[Category: Dna-binding]]~~
	~~[[Category: Geobacillus]]~~
	~~[[Category: Histone-like~~]]

OCA at 12:49, 13 October 2021

2021-10-13T12:49:32Z

← Older revision		Revision as of 12:49, 13 October 2021
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	==Crystal structure of a R18W mutant of the DNA-binding protein RemA from Geobacillus thermodenitrificans==		==Crystal structure of a R18W mutant of the DNA-binding protein RemA from Geobacillus thermodenitrificans==
	<StructureSection load='7bme' size='340' side='right'caption='[[7bme]]' scene=''>		<StructureSection load='7bme' size='340' side='right'caption='[[7bme]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BME OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BME FirstGlance]. <br>		<table><tr><td colspan='2'>[[7bme]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Geotn Geotn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BME OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BME FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bme OCA], [https://pdbe.org/7bme PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bme RCSB], [https://www.ebi.ac.uk/pdbsum/7bme PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bme ProSAT]</span></td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7bm2\|7bm2]]</div></td></tr>
			<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GTNG_1019 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=420246 GEOTN])</td></tr>
			<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bme OCA], [https://pdbe.org/7bme PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bme RCSB], [https://www.ebi.ac.uk/pdbsum/7bme PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bme ProSAT]</span></td></tr>
	</table>		</table>
			<div style="background-color:#fffaf0;">
			== Publication Abstract from PubMed ==
			Bacillus subtilis can form structurally complex biofilms on solid or liquid surfaces, which requires expression of genes for matrix production. The transcription of these genes is activated by regulatory protein RemA, which binds to poorly conserved, repetitive DNA regions but lacks obvious DNA-binding motifs or domains. Here, we present the structure of the RemA homologue from Geobacillus thermodenitrificans, showing a unique octameric ring with the potential to form a 16-meric superstructure. These results, together with further biochemical and in vivo characterization of B. subtilis RemA, suggests that the protein can wrap DNA around its ring-like structure through a LytTR-related domain.

			Structural and functional characterization of the bacterial biofilm activator RemA.,Hoffmann T, Mrusek D, Bedrunka P, Burchert F, Mais CN, Kearns DB, Altegoer F, Bremer E, Bange G Nat Commun. 2021 Sep 29;12(1):5707. doi: 10.1038/s41467-021-26005-4. PMID:34588455<ref>PMID:34588455</ref>

			From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
			</div>
			<div class="pdbe-citations 7bme" style="background-color:#fffaf0;"></div>
			== References ==
			<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
			[[Category: Geotn]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Altegoer F]]		[[Category: Altegoer, F]]
	[[Category: Bange G]]		[[Category: Bange, G]]
	[[Category: Mrusek D]]		[[Category: Mrusek, D]]
			[[Category: Biofilm]]
			[[Category: Dna binding protein]]
			[[Category: Dna-binding]]
			[[Category: Geobacillus]]
			[[Category: Histone-like]]

OCA at 06:17, 25 August 2021

2021-08-25T06:17:31Z

← Older revision		Revision as of 06:17, 25 August 2021
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	~~'''Unreleased structure'''~~

	~~The entry 7bme is ON HOLD until Paper Publication~~		==Crystal structure of a R18W mutant of the DNA-binding protein RemA from Geobacillus thermodenitrificans==
			<StructureSection load='7bme' size='340' side='right'caption='[[7bme]]' scene=''>
	~~Authors: Altegoer, F., Mrusek, D., Bange, G.~~		== Structural highlights ==
			<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BME OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BME FirstGlance]. <br>
	~~Description:~~ Crystal structure of a R18W mutant of the DNA-binding protein RemA from Geobacillus thermodenitrificans		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bme OCA], [https://pdbe.org/7bme PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bme RCSB], [https://www.ebi.ac.uk/pdbsum/7bme PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bme ProSAT]</span></td></tr>
	[[Category: ~~Unreleased~~ Structures]]		</table>
	[[Category: ~~Bange, G~~]]		__TOC__
	[[Category: ~~Mrusek, D~~]]		</StructureSection>
	[[Category: ~~Altegoer, F~~]]		[[Category: Large Structures]]
			[[Category: Altegoer F]]
			[[Category: Bange G]]
			[[Category: Mrusek D]]

OCA at 08:36, 7 July 2021

2021-07-07T08:36:19Z

← Older revision		Revision as of 08:36, 7 July 2021
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	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 7bme is ON HOLD		The entry 7bme is ON HOLD until Paper Publication

	Authors: Altegoer, F., Mrusek, D., Bange, G.		Authors: Altegoer, F., Mrusek, D., Bange, G.

OCA at 13:29, 17 June 2021

2021-06-17T13:29:07Z

← Older revision		Revision as of 13:29, 17 June 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 7bme is ON HOLD ~~until Paper Publication~~		The entry 7bme is ON HOLD

	Authors: Altegoer, F., Mrusek, D., Bange, G.		Authors: Altegoer, F., Mrusek, D., Bange, G.

OCA at 09:13, 3 February 2021

2021-02-03T09:13:24Z

← Older revision		Revision as of 09:13, 3 February 2021
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

	The entry 7bme is ON HOLD		The entry 7bme is ON HOLD until Paper Publication

	Authors: Altegoer, F., Mrusek, D., Bange, G.		Authors: Altegoer, F., Mrusek, D., Bange, G.

OCA: Protected "7bme" [edit=sysop:move=sysop]

2021-01-27T06:35:41Z

Protected "7bme" [edit=sysop:move=sysop]

← Older revision	Revision as of 06:35, 27 January 2021
(No difference)

OCA: New page: '''Unreleased structure''' The entry 7bme is ON HOLD Authors: Altegoer, F., Mrusek, D., Bange, G. Description: Crystal structure of a R18W mutant of the DNA-binding protein RemA from G...

2021-01-27T06:35:40Z

New page: '''Unreleased structure''' The entry 7bme is ON HOLD Authors: Altegoer, F., Mrusek, D., Bange, G. Description: Crystal structure of a R18W mutant of the DNA-binding protein RemA from G...

New page

'''Unreleased structure'''

The entry 7bme is ON HOLD

Authors: Altegoer, F., Mrusek, D., Bange, G.

Description: Crystal structure of a R18W mutant of the DNA-binding protein RemA from Geobacillus thermodenitrificans
[[Category: Unreleased Structures]]
[[Category: Bange, G]]
[[Category: Mrusek, D]]
[[Category: Altegoer, F]]